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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HIV-1 SUBTYPE F DIS EXTENDED DUPLEX RNA BOUND TO LIVIDOMYCIN
Keywords HIV-1, RNA, AMINOGLYCOSIDE,LIVIDOMYCIN, EXTENDED DUPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3C5D     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 23 469 21
2  RNA    B 23 469 21
3  Ligand   'HIV-1 SUBTYPE F GENOMIC RNA  A 1 0 1
4  Ligand   'HIV-1 SUBTYPE F GENOMIC RNA  B 3 0 105
5 Water     140 0 140
total       190 938 288
Nucleic acids
Unit 1 C1 U2 UMS3 G4 C5 U6 G7 A8 A9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Unit 2 C1 U2 UMS3 G4 C5 U6 G7 A8 A9 G10 U11 G12 C13 A14 C15 A16 C17 A18 G19 C20 A21 A22 G23
Ligands
Unit 3 K24
Unit 4 LIV24 LIV25 K26
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany