3C0Z - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CATALYTIC DOMAIN OF HUMAN HISTONE DEACETYLASE HDAC7 IN COMPLEX WITH SAHA
• Keywords: HDAC, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, ALTERNATIVE SPLICING, CHROMATIN REGULATOR, CYTOPLASM, HYDROLASE, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, REPRESSOR, TRANSCRIPTION, TRANSCRIPTION REGULATION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3C0Z	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTONE DEACETYLASE 7A	A	383	2885	0
2	Protein	HISTONE DEACETYLASE 7A	B	368	2791	0
3	Protein	HISTONE DEACETYLASE 7A	C	359	2724	0
4	Ligand	HISTONE DEACETYLASE 7A	A	5	0	12
5	Ligand	HISTONE DEACETYLASE 7A	B	5	0	13
6	Ligand	HISTONE DEACETYLASE 7A	C	5	0	12
7	Water			332	0	332
total				1457	8400	369

Proteins

Unit 1	THR 515 LEU 516 PRO 517 PHE 518 THR 519 THR 520 GLY 521 LEU 522 ILE 523 TYR 524 ASP 525 SER 526 VAL 527 MET 528 LEU 529 LYS 530 HIS 531 GLN 532 CYS 533 SER 534 CYS 535 GLY 536 ASP 537 ASN 538 SER 539 ARG 540 HIS 541 PRO 542 GLU 543 HIS 544 ALA 545 GLY 546 ARG 547 ILE 548 GLN 549 SER 550 ILE 551 TRP 552 SER 553 ARG 554 LEU 555 GLN 556 GLU 557 ARG 558 GLY 559 LEU 560 ARG 561 SER 562 GLN 563 CYS 564 GLU 565 CYS 566 LEU 567 ARG 568 GLY 569 ARG 570 LYS 571 ALA 572 SER 573 LEU 574 GLU 575 GLU 576 LEU 577 GLN 578 SER 579 VAL 580 HIS 581 SER 582 GLU 583 ARG 584 HIS 585 VAL 586 LEU 587 LEU 588 TYR 589 GLY 590 THR 591 ASN 592 PRO 593 LEU 594 SER 595 ARG 596 LEU 597 LYS 598 LEU 599 ASP 600 ASN 601 GLY 602 LYS 603 LEU 604 ALA 605 GLY 606 LEU 607 LEU 608 ALA 609 GLN 610 VAL 614 MET 615 LEU 616 PRO 617 CYS 618 GLY 619 GLY 620 VAL 621 GLY 622 VAL 623 ASP 624 THR 625 ASP 626 THR 627 ILE 628 TRP 629 ASN 630 GLU 631 LEU 632 HIS 633 SER 634 SER 635 ASN 636 ALA 637 ALA 638 ARG 639 TRP 640 ALA 641 ALA 642 GLY 643 SER 644 VAL 645 THR 646 ASP 647 LEU 648 ALA 649 PHE 650 LYS 651 VAL 652 ALA 653 SER 654 ARG 655 GLU 656 LEU 657 LYS 658 ASN 659 GLY 660 PHE 661 ALA 662 VAL 663 VAL 664 ARG 665 PRO 666 PRO 667 GLY 668 HIS 669 HIS 670 ALA 671 ASP 672 HIS 673 SER 674 THR 675 ALA 676 MET 677 GLY 678 PHE 679 CYS 680 PHE 681 PHE 682 ASN 683 SER 684 VAL 685 ALA 686 ILE 687 ALA 688 CYS 689 ARG 690 GLN 691 LEU 692 GLN 693 GLN 694 GLN 695 SER 696 LYS 697 ALA 698 SER 699 LYS 700 ILE 701 LEU 702 ILE 703 VAL 704 ASP 705 TRP 706 ASP 707 VAL 708 HIS 709 HIS 710 GLY 711 ASN 712 GLY 713 THR 714 GLN 715 GLN 716 THR 717 PHE 718 TYR 719 GLN 720 ASP 721 PRO 722 SER 723 VAL 724 LEU 725 TYR 726 ILE 727 SER 728 LEU 729 HIS 730 ARG 731 HIS 732 ASP 733 ASP 734 GLY 735 ASN 736 PHE 737 PHE 738 PRO 739 GLY 740 SER 741 GLY 742 ALA 743 VAL 744 ASP 745 GLU 746 VAL 747 GLY 748 ALA 749 GLY 750 SER 751 GLY 752 GLU 753 GLY 754 PHE 755 ASN 756 VAL 757 ASN 758 VAL 759 ALA 760 TRP 761 ALA 762 GLY 763 GLY 764 LEU 765 ASP 766 PRO 767 PRO 768 MET 769 GLY 770 ASP 771 PRO 772 GLU 773 TYR 774 LEU 775 ALA 776 ALA 777 PHE 778 ARG 779 ILE 780 VAL 781 VAL 782 MET 783 PRO 784 ILE 785 ALA 786 ARG 787 GLU 788 PHE 789 SER 790 PRO 791 ASP 792 LEU 793 VAL 794 LEU 795 VAL 796 SER 797 ALA 798 GLY 799 PHE 800 ASP 801 ALA 802 ALA 803 GLU 804 GLY 805 HIS 806 PRO 807 ALA 808 PRO 809 LEU 810 GLY 811 GLY 812 TYR 813 HIS 814 VAL 815 SER 816 ALA 817 LYS 818 CYS 819 PHE 820 GLY 821 TYR 822 MET 823 THR 824 GLN 825 GLN 826 LEU 827 MET 828 ASN 829 LEU 830 ALA 831 GLY 832 GLY 833 ALA 834 VAL 835 VAL 836 LEU 837 ALA 838 LEU 839 GLU 840 GLY 841 GLY 842 HIS 843 ASP 844 LEU 845 THR 846 ALA 847 ILE 848 CYS 849 ASP 850 ALA 851 SER 852 GLU 853 ALA 854 CYS 855 VAL 856 ALA 857 ALA 858 LEU 859 LEU 860 GLY 861 ASN 862 ARG 863 VAL 864 ASP 865 PRO 866 LEU 867 SER 868 GLU 869 GLU 870 GLY 871 TRP 872 LYS 873 GLN 874 LYS 875 PRO 876 ASN 877 LEU 878 ASN 879 ALA 880 ILE 881 ARG 882 SER 883 LEU 884 GLU 885 ALA 886 VAL 887 ILE 888 ARG 889 VAL 890 HIS 891 SER 892 LYS 893 TYR 894 TRP 895 GLY 896 CYS 897 MET 898 GLN 899 ARG 900
Unit 2	LEU 516 PRO 517 PHE 518 THR 519 THR 520 GLY 521 LEU 522 ILE 523 TYR 524 ASP 525 SER 526 VAL 527 MET 528 LEU 529 LYS 530 HIS 531 GLN 532 CYS 533 SER 534 CYS 535 GLY 536 ASP 537 ASN 538 SER 539 ARG 540 HIS 541 PRO 542 GLU 543 HIS 544 ALA 545 GLY 546 ARG 547 ILE 548 GLN 549 SER 550 ILE 551 TRP 552 SER 553 ARG 554 LEU 555 GLN 556 GLU 557 ARG 558 GLY 559 LEU 560 ARG 561 SER 562 GLN 563 CYS 564 GLU 565 CYS 566 LEU 567 ARG 568 GLY 569 ARG 570 LYS 571 ALA 572 SER 573 LEU 574 GLU 575 GLU 576 LEU 577 GLN 578 SER 579 VAL 580 HIS 581 SER 582 GLU 583 ARG 584 HIS 585 VAL 586 LEU 587 LEU 588 TYR 589 GLY 590 THR 591 ASN 592 PRO 593 LEU 594 SER 595 VAL 614 MET 615 LEU 616 PRO 617 CYS 618 GLY 619 GLY 620 VAL 621 GLY 622 VAL 623 ASP 624 THR 625 ASP 626 THR 627 ILE 628 TRP 629 ASN 630 GLU 631 LEU 632 HIS 633 SER 634 SER 635 ASN 636 ALA 637 ALA 638 ARG 639 TRP 640 ALA 641 ALA 642 GLY 643 SER 644 VAL 645 THR 646 ASP 647 LEU 648 ALA 649 PHE 650 LYS 651 VAL 652 ALA 653 SER 654 ARG 655 GLU 656 LEU 657 LYS 658 ASN 659 GLY 660 PHE 661 ALA 662 VAL 663 VAL 664 ARG 665 PRO 666 PRO 667 GLY 668 HIS 669 HIS 670 ALA 671 ASP 672 HIS 673 SER 674 THR 675 ALA 676 MET 677 GLY 678 PHE 679 CYS 680 PHE 681 PHE 682 ASN 683 SER 684 VAL 685 ALA 686 ILE 687 ALA 688 CYS 689 ARG 690 GLN 691 LEU 692 GLN 693 GLN 694 GLN 695 SER 696 LYS 697 ALA 698 SER 699 LYS 700 ILE 701 LEU 702 ILE 703 VAL 704 ASP 705 TRP 706 ASP 707 VAL 708 HIS 709 HIS 710 GLY 711 ASN 712 GLY 713 THR 714 GLN 715 GLN 716 THR 717 PHE 718 TYR 719 GLN 720 ASP 721 PRO 722 SER 723 VAL 724 LEU 725 TYR 726 ILE 727 SER 728 LEU 729 HIS 730 ARG 731 HIS 732 ASP 733 ASP 734 GLY 735 ASN 736 PHE 737 PHE 738 PRO 739 GLY 740 SER 741 GLY 742 ALA 743 VAL 744 ASP 745 GLU 746 VAL 747 GLY 748 ALA 749 GLY 750 SER 751 GLY 752 GLU 753 GLY 754 PHE 755 ASN 756 VAL 757 ASN 758 VAL 759 ALA 760 TRP 761 ALA 762 GLY 763 GLY 764 LEU 765 ASP 766 PRO 767 PRO 768 MET 769 GLY 770 ASP 771 PRO 772 GLU 773 TYR 774 LEU 775 ALA 776 ALA 777 PHE 778 ARG 779 ILE 780 VAL 781 VAL 782 MET 783 PRO 784 ILE 785 ALA 786 ARG 787 GLU 788 PHE 789 SER 790 PRO 791 ASP 792 LEU 793 VAL 794 LEU 795 VAL 796 SER 797 ALA 798 GLY 799 PHE 800 ASP 801 ALA 802 ALA 803 GLU 804 GLY 805 HIS 806 PRO 807 ALA 808 PRO 809 LEU 810 GLY 811 GLY 812 TYR 813 HIS 814 VAL 815 SER 816 ALA 817 LYS 818 CYS 819 PHE 820 GLY 821 TYR 822 MET 823 THR 824 GLN 825 GLN 826 LEU 827 MET 828 ASN 829 LEU 830 ALA 831 GLY 832 GLY 833 ALA 834 VAL 835 VAL 836 LEU 837 ALA 838 LEU 839 GLU 840 GLY 841 GLY 842 HIS 843 ASP 844 LEU 845 THR 846 ALA 847 ILE 848 CYS 849 ASP 850 ALA 851 SER 852 GLU 853 ALA 854 CYS 855 VAL 856 ALA 857 ALA 858 LEU 859 LEU 860 GLY 861 ASN 862 ARG 863 VAL 864 ASP 865 PRO 866 LEU 867 SER 868 GLU 869 GLU 870 GLY 871 TRP 872 LYS 873 GLN 874 LYS 875 PRO 876 ASN 877 LEU 878 ASN 879 ALA 880 ILE 881 ARG 882 SER 883 LEU 884 GLU 885 ALA 886 VAL 887 ILE 888 ARG 889 VAL 890 HIS 891 SER 892 LYS 893 TYR 894 TRP 895 GLY 896 CYS 897 MET 898 GLN 899 ARG 900 LEU 901
Unit 3	THR 519 THR 520 GLY 521 LEU 522 ILE 523 TYR 524 ASP 525 SER 526 VAL 527 MET 528 LEU 529 LYS 530 HIS 531 GLN 532 CYS 533 SER 534 CYS 535 GLY 536 ASP 537 ASN 538 SER 539 ARG 540 HIS 541 PRO 542 GLU 543 HIS 544 ALA 545 GLY 546 ARG 547 ILE 548 GLN 549 SER 550 ILE 551 TRP 552 SER 553 ARG 554 LEU 555 GLN 556 GLU 557 ARG 558 GLY 559 LEU 560 ARG 561 SER 562 GLN 563 CYS 564 GLU 565 CYS 566 LEU 567 ARG 568 GLY 569 ARG 570 LYS 571 ALA 572 SER 573 LEU 574 GLU 575 GLU 576 LEU 577 GLN 578 SER 579 VAL 580 HIS 581 SER 582 GLU 583 ARG 584 HIS 585 VAL 586 LEU 587 LEU 588 TYR 589 GLY 590 THR 591 ASN 592 PRO 593 LEU 616 PRO 617 CYS 618 GLY 619 GLY 620 VAL 621 GLY 622 VAL 623 ASP 624 THR 625 ASP 626 THR 627 ILE 628 TRP 629 ASN 630 GLU 631 LEU 632 HIS 633 SER 634 SER 635 ASN 636 ALA 637 ALA 638 ARG 639 TRP 640 ALA 641 ALA 642 GLY 643 SER 644 VAL 645 THR 646 ASP 647 LEU 648 ALA 649 PHE 650 LYS 651 VAL 652 ALA 653 SER 654 ARG 655 GLU 656 LEU 657 LYS 658 ASN 659 GLY 660 PHE 661 ALA 662 VAL 663 VAL 664 ARG 665 PRO 666 PRO 667 GLY 668 HIS 669 HIS 670 ALA 671 ASP 672 HIS 673 SER 674 THR 675 ALA 676 MET 677 GLY 678 PHE 679 CYS 680 PHE 681 PHE 682 ASN 683 SER 684 VAL 685 ALA 686 ILE 687 ALA 688 CYS 689 ARG 690 GLN 691 LEU 692 GLN 693 GLN 694 GLN 695 SER 696 LYS 697 ALA 698 SER 699 LYS 700 ILE 701 LEU 702 ILE 703 VAL 704 ASP 705 TRP 706 ASP 707 VAL 708 HIS 709 HIS 710 GLY 711 ASN 712 GLY 713 THR 714 GLN 715 GLN 716 THR 717 PHE 718 TYR 719 GLN 720 ASP 721 PRO 722 SER 723 VAL 724 LEU 725 TYR 726 ILE 727 SER 728 LEU 729 HIS 730 ARG 731 HIS 732 ASP 733 ASP 734 GLY 735 ASN 736 PHE 737 PHE 738 PRO 739 GLY 740 SER 741 GLY 742 ALA 743 VAL 744 ASP 745 GLU 746 VAL 747 GLY 748 ALA 749 GLY 750 SER 751 GLY 752 GLU 753 GLY 754 PHE 755 ASN 756 VAL 757 ASN 758 VAL 759 ALA 760 TRP 761 ALA 762 GLY 763 GLY 764 LEU 765 ASP 766 PRO 767 PRO 768 MET 769 GLY 770 ASP 771 PRO 772 GLU 773 TYR 774 LEU 775 ALA 776 ALA 777 PHE 778 ARG 779 ILE 780 VAL 781 VAL 782 MET 783 PRO 784 ILE 785 ALA 786 ARG 787 GLU 788 PHE 789 SER 790 PRO 791 ASP 792 LEU 793 VAL 794 LEU 795 VAL 796 SER 797 ALA 798 GLY 799 PHE 800 ASP 801 ALA 802 ALA 803 GLU 804 GLY 805 HIS 806 PRO 807 ALA 808 PRO 809 LEU 810 GLY 811 GLY 812 TYR 813 HIS 814 VAL 815 SER 816 ALA 817 LYS 818 CYS 819 PHE 820 GLY 821 TYR 822 MET 823 THR 824 GLN 825 GLN 826 LEU 827 MET 828 ASN 829 LEU 830 ALA 831 GLY 832 GLY 833 ALA 834 VAL 835 VAL 836 LEU 837 ALA 838 LEU 839 GLU 840 GLY 841 GLY 842 HIS 843 ASP 844 LEU 845 THR 846 ALA 847 ILE 848 CYS 849 ASP 850 ALA 851 SER 852 GLU 853 ALA 854 CYS 855 VAL 856 ALA 857 ALA 858 LEU 859 LEU 860 GLY 861 ASN 862 ARG 863 VAL 864 ASP 865 PRO 866 LEU 867 SER 868 GLU 869 GLU 870 GLY 871 TRP 872 LYS 873 GLN 874 LYS 875 PRO 876 ASN 877 LEU 878 ASN 879 ALA 880 ILE 881 ARG 882 SER 883 LEU 884 GLU 885 ALA 886 VAL 887 ILE 888 ARG 889 VAL 890 HIS 891 SER 892 LYS 893 TYR 894 TRP 895 GLY 896 CYS 897 MET 898 GLN 899

Ligands

Unit 4	ZN 101 ZN 102 K 201 K 202 SHH 301
Unit 5	ZN 101 ZN 102 K 201 K 202 SHH 301
Unit 6	ZN 101 ZN 102 K 201 K 202 SHH 301