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| Title | I-SCEI IN COMPLEX WITH A BOTTOM NICKED DNA SUBSTRATE | |
| Keywords | ENDONUCLEASE, HOMING, LADLIDADG, CATALYTIC MECHANISM, METAL BINDING, NICKED INTERMEDIATE, HYDROLASE, INTRON HOMING, MITOCHONDRION, MRNA PROCESSING, MRNA SPLICING, HYDROLASE/DNA COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 3C0W | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | INTRON-ENCODED ENDONUCLEASE I-SCEI | A | 223 | 1854 | 0 |
| 2 | Other macromolecule | DNA (5'- D(*DAP*DCP*DGP*DCP*DTP*DAP*DGP*DGP*DGP*DAP*DTP*DAP*DAP*DCP* DAP*DGP*DGP*DGP*DTP*DAP*DAP*DTP*DAP*DC)-3') | B | 24 | 496 | 0 |
| 3 | Other macromolecule | DNA (5'- D(*DGP*DTP*DAP*DTP*DTP*DAP*DCP*DCP*DCP*DTP*DGP*DTP*DTP*DAP* DT)-3') | C | 15 | 301 | 0 |
| 4 | Other macromolecule | DNA (5'-D(P*DCP*DCP*DCP*DTP*DAP*DGP*DCP*DGP*DT)- 3') | D | 9 | 182 | 0 |
| 5 | Ligand | INTRON-ENCODED ENDONUCLEASE I-SCEI | A | 3 | 0 | 3 |
| 6 | Ligand | DNA (5'- D(*DAP*DCP*DGP*DCP*DTP*DAP*DGP*DGP*DGP*DAP*DTP*DAP*DAP*DCP* DAP*DGP*DGP*DGP*DTP*DAP*DAP*DTP*DAP*DC)-3') | B | 1 | 0 | 1 |
| 7 | Water | 98 | 0 | 98 | ||
| total | 373 | 2833 | 102 |
| Unit 1 | ASN3 ILE4 LYS5 LYS6 ASN7 GLN8 VAL9 MET10 ASN11 LEU12 GLY13 PRO14 ASN15 SER16 LYS17 LEU18 LEU19 LYS20 GLU21 TYR22 LYS23 SER24 GLN25 LEU26 ILE27 GLU28 LEU29 ASN30 ILE31 GLU32 GLN33 PHE34 GLU35 ALA36 GLY37 ILE38 GLY39 LEU40 ILE41 LEU42 GLY43 ASP44 ALA45 TYR46 ILE47 ARG48 SER49 ARG50 ASP51 GLU52 GLY53 LYS54 THR55 TYR56 CYS57 MET58 GLN59 PHE60 GLU61 TRP62 LYS63 ASN64 LYS65 ALA66 TYR67 MET68 ASP69 HIS70 VAL71 CYS72 LEU73 LEU74 TYR75 ASP76 GLN77 TRP78 VAL79 LEU80 SER81 PRO82 PRO83 HIS84 LYS85 LYS86 GLU87 ARG88 VAL89 ASN90 HIS91 LEU92 GLY93 ASN94 LEU95 VAL96 ILE97 THR98 TRP99 GLY100 ALA101 GLN102 THR103 PHE104 LYS105 HIS106 GLN107 ALA108 PHE109 ASN110 LYS111 LEU112 ALA113 ASN114 LEU115 PHE116 ILE117 VAL118 ASN119 ASN120 LYS121 LYS122 THR123 ILE124 PRO125 ASN126 ASN127 LEU128 VAL129 GLU130 ASN131 TYR132 LEU133 THR134 PRO135 MET136 SER137 LEU138 ALA139 TYR140 TRP141 PHE142 MET143 ASP144 ASP145 GLY146 GLY147 LYS148 TRP149 ASP150 TYR151 ASN152 LYS153 ASN154 SER155 THR156 ASN157 LYS158 SER159 ILE160 VAL161 LEU162 ASN163 THR164 GLN165 SER166 PHE167 THR168 PHE169 GLU170 GLU171 VAL172 GLU173 TYR174 LEU175 VAL176 LYS177 GLY178 LEU179 ARG180 ASN181 LYS182 PHE183 GLN184 LEU185 ASN186 CYS187 TYR188 VAL189 LYS190 ILE191 ASN192 LYS193 ASN194 LYS195 PRO196 ILE197 ILE198 TYR199 ILE200 ASP201 SER202 MET203 SER204 TYR205 LEU206 ILE207 PHE208 TYR209 ASN210 LEU211 ILE212 LYS213 PRO214 TYR215 LEU216 ILE217 PRO218 GLN219 MET220 MET221 TYR222 LYS223 LEU224 PRO225 |
| Unit 2 | DA2 DC3 DG4 DC5 DT6 DA7 DG8 DG9 DG10 DA11 DT12 DA13 DA14 DC15 DA16 DG17 DG18 DG19 DT20 DA21 DA22 DT23 DA24 DC25 |
| Unit 3 | DG2 DT3 DA4 DT5 DT6 DA7 DC8 DC9 DC10 DT11 DG12 DT13 DT14 DA15 DT16 |
| Unit 4 | DC17 DC18 DC19 DT20 DA21 DG22 DC23 DG24 DT25 |
| Unit 5 | CA301 NA303 CA304 |
| Unit 6 | CA302 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |