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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE TRANSTHYRETIN-RETINOL BINDING PROTE COMPLEX
Keywords RETINOL, VITAMIN A, PROTEIN-PROTEIN COMPLEX, RBP, TTR, AMYLO DISEASE MUTATION, GLYCOPROTEIN, HORMONE, POLYNEUROPATHY, RE BINDING, SECRETED, THYROID HORMONE, TRANSPORT, SENSORY TRAN VISION, TRANSPORT PROTEIN-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3BSZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSTHYRETIN  A 119 920 0
2  Protein   TRANSTHYRETIN  B 119 920 0
3  Protein   TRANSTHYRETIN  C 119 920 0
4  Protein   TRANSTHYRETIN  D 119 920 0
5  Protein   PLASMA RETINOL-BINDING PROTEIN  E 174 1407 0
6  Protein   PLASMA RETINOL-BINDING PROTEIN  F 174 1407 0
7  Protein   FAB FRAGMENT HEAVY CHAIN  L 215 1667 0
8  Protein   FAB FRAGMENT LIGHT CHAIN  H 215 1612 0
9  Protein   FAB FRAGMENT HEAVY CHAIN  M 215 1667 0
10  Protein   FAB FRAGMENT LIGHT CHAIN  N 215 1612 0
11  Ligand   PLASMA RETINOL-BINDING PROTEIN  E 1 0 21
12  Ligand   PLASMA RETINOL-BINDING PROTEIN  F 1 0 21
13 Water     334 0 334
total       2020 13052 376

Proteins
Unit 1 GLU7 SER8 LYS9 CYS10 PRO11 LEU12 MET13 VAL14 LYS15 VAL16 LEU17 ASP18 ALA19 VAL20 ARG21 GLY22 SER23 PRO24 ALA25 ILE26 ASN27 VAL28 ALA29 VAL30 HIS31 VAL32 PHE33 ARG34 LYS35 ALA36 ALA37 ASP38 ASP39 THR40 TRP41 GLU42 PRO43 PHE44 ALA45 SER46 GLY47 LYS48 THR49 SER50 GLU51 SER52 GLY53 GLU54 LEU55 HIS56 GLY57 LEU58 THR59 THR60 GLU61 GLU62 GLU63 PHE64 VAL65 GLU66 GLY67 ILE68 TYR69 LYS70 VAL71 GLU72 ILE73 ASP74 THR75 LYS76 SER77 TYR78 TRP79 LYS80 ALA81 LEU82 GLY83 ILE84 SER85 PRO86 PHE87 HIS88 GLU89 HIS90 ALA91 GLU92 VAL93 VAL94 PHE95 THR96 ALA97 ASN98 ASP99 SER100 GLY101 PRO102 ARG103 ARG104 TYR105 THR106 ILE107 ALA108 ALA109 LEU110 LEU111 SER112 PRO113 TYR114 SER115 TYR116 SER117 THR118 THR119 ALA120 VAL121 VAL122 THR123 ASN124 PRO125
Unit 2 GLU7 SER8 LYS9 CYS10 PRO11 LEU12 MET13 VAL14 LYS15 VAL16 LEU17 ASP18 ALA19 VAL20 ARG21 GLY22 SER23 PRO24 ALA25 ILE26 ASN27 VAL28 ALA29 VAL30 HIS31 VAL32 PHE33 ARG34 LYS35 ALA36 ALA37 ASP38 ASP39 THR40 TRP41 GLU42 PRO43 PHE44 ALA45 SER46 GLY47 LYS48 THR49 SER50 GLU51 SER52 GLY53 GLU54 LEU55 HIS56 GLY57 LEU58 THR59 THR60 GLU61 GLU62 GLU63 PHE64 VAL65 GLU66 GLY67 ILE68 TYR69 LYS70 VAL71 GLU72 ILE73 ASP74 THR75 LYS76 SER77 TYR78 TRP79 LYS80 ALA81 LEU82 GLY83 ILE84 SER85 PRO86 PHE87 HIS88 GLU89 HIS90 ALA91 GLU92 VAL93 VAL94 PHE95 THR96 ALA97 ASN98 ASP99 SER100 GLY101 PRO102 ARG103 ARG104 TYR105 THR106 ILE107 ALA108 ALA109 LEU110 LEU111 SER112 PRO113 TYR114 SER115 TYR116 SER117 THR118 THR119 ALA120 VAL121 VAL122 THR123 ASN124 PRO125
Unit 3 GLU7 SER8 LYS9 CYS10 PRO11 LEU12 MET13 VAL14 LYS15 VAL16 LEU17 ASP18 ALA19 VAL20 ARG21 GLY22 SER23 PRO24 ALA25 ILE26 ASN27 VAL28 ALA29 VAL30 HIS31 VAL32 PHE33 ARG34 LYS35 ALA36 ALA37 ASP38 ASP39 THR40 TRP41 GLU42 PRO43 PHE44 ALA45 SER46 GLY47 LYS48 THR49 SER50 GLU51 SER52 GLY53 GLU54 LEU55 HIS56 GLY57 LEU58 THR59 THR60 GLU61 GLU62 GLU63 PHE64 VAL65 GLU66 GLY67 ILE68 TYR69 LYS70 VAL71 GLU72 ILE73 ASP74 THR75 LYS76 SER77 TYR78 TRP79 LYS80 ALA81 LEU82 GLY83 ILE84 SER85 PRO86 PHE87 HIS88 GLU89 HIS90 ALA91 GLU92 VAL93 VAL94 PHE95 THR96 ALA97 ASN98 ASP99 SER100 GLY101 PRO102 ARG103 ARG104 TYR105 THR106 ILE107 ALA108 ALA109 LEU110 LEU111 SER112 PRO113 TYR114 SER115 TYR116 SER117 THR118 THR119 ALA120 VAL121 VAL122 THR123 ASN124 PRO125
Unit 4 GLU7 SER8 LYS9 CYS10 PRO11 LEU12 MET13 VAL14 LYS15 VAL16 LEU17 ASP18 ALA19 VAL20 ARG21 GLY22 SER23 PRO24 ALA25 ILE26 ASN27 VAL28 ALA29 VAL30 HIS31 VAL32 PHE33 ARG34 LYS35 ALA36 ALA37 ASP38 ASP39 THR40 TRP41 GLU42 PRO43 PHE44 ALA45 SER46 GLY47 LYS48 THR49 SER50 GLU51 SER52 GLY53 GLU54 LEU55 HIS56 GLY57 LEU58 THR59 THR60 GLU61 GLU62 GLU63 PHE64 VAL65 GLU66 GLY67 ILE68 TYR69 LYS70 VAL71 GLU72 ILE73 ASP74 THR75 LYS76 SER77 TYR78 TRP79 LYS80 ALA81 LEU82 GLY83 ILE84 SER85 PRO86 PHE87 HIS88 GLU89 HIS90 ALA91 GLU92 VAL93 VAL94 PHE95 THR96 ALA97 ASN98 ASP99 SER100 GLY101 PRO102 ARG103 ARG104 TYR105 THR106 ILE107 ALA108 ALA109 LEU110 LEU111 SER112 PRO113 TYR114 SER115 TYR116 SER117 THR118 THR119 ALA120 VAL121 VAL122 THR123 ASN124 PRO125
Unit 5 GLU1 ARG2 ASP3 CYS4 ARG5 VAL6 SER7 SER8 PHE9 ARG10 VAL11 LYS12 GLU13 ASN14 PHE15 ASP16 LYS17 ALA18 ARG19 PHE20 SER21 GLY22 THR23 TRP24 TYR25 ALA26 MET27 ALA28 LYS29 LYS30 ASP31 PRO32 GLU33 GLY34 LEU35 PHE36 LEU37 GLN38 ASP39 ASN40 ILE41 VAL42 ALA43 GLU44 PHE45 SER46 VAL47 ASP48 GLU49 THR50 GLY51 GLN52 MET53 SER54 ALA55 THR56 ALA57 LYS58 GLY59 ARG60 VAL61 ARG62 LEU63 LEU64 ASN65 ASN66 TRP67 ASP68 VAL69 CYS70 ALA71 ASP72 MET73 VAL74 GLY75 THR76 PHE77 THR78 ASP79 THR80 GLU81 ASP82 PRO83 ALA84 LYS85 PHE86 LYS87 MET88 LYS89 TYR90 TRP91 GLY92 VAL93 ALA94 SER95 PHE96 LEU97 GLN98 LYS99 GLY100 ASN101 ASP102 ASP103 HIS104 TRP105 ILE106 VAL107 ASP108 THR109 ASP110 TYR111 ASP112 THR113 TYR114 ALA115 VAL116 GLN117 TYR118 SER119 CYS120 ARG121 LEU122 LEU123 ASN124 LEU125 ASP126 GLY127 THR128 CYS129 ALA130 ASP131 SER132 TYR133 SER134 PHE135 VAL136 PHE137 SER138 ARG139 ASP140 PRO141 ASN142 GLY143 LEU144 PRO145 PRO146 GLU147 ALA148 GLN149 LYS150 ILE151 VAL152 ARG153 GLN154 ARG155 GLN156 GLU157 GLU158 LEU159 CYS160 LEU161 ALA162 ARG163 GLN164 TYR165 ARG166 LEU167 ILE168 VAL169 HIS170 ASN171 GLY172 TYR173 CYS174
Unit 6 GLU1 ARG2 ASP3 CYS4 ARG5 VAL6 SER7 SER8 PHE9 ARG10 VAL11 LYS12 GLU13 ASN14 PHE15 ASP16 LYS17 ALA18 ARG19 PHE20 SER21 GLY22 THR23 TRP24 TYR25 ALA26 MET27 ALA28 LYS29 LYS30 ASP31 PRO32 GLU33 GLY34 LEU35 PHE36 LEU37 GLN38 ASP39 ASN40 ILE41 VAL42 ALA43 GLU44 PHE45 SER46 VAL47 ASP48 GLU49 THR50 GLY51 GLN52 MET53 SER54 ALA55 THR56 ALA57 LYS58 GLY59 ARG60 VAL61 ARG62 LEU63 LEU64 ASN65 ASN66 TRP67 ASP68 VAL69 CYS70 ALA71 ASP72 MET73 VAL74 GLY75 THR76 PHE77 THR78 ASP79 THR80 GLU81 ASP82 PRO83 ALA84 LYS85 PHE86 LYS87 MET88 LYS89 TYR90 TRP91 GLY92 VAL93 ALA94 SER95 PHE96 LEU97 GLN98 LYS99 GLY100 ASN101 ASP102 ASP103 HIS104 TRP105 ILE106 VAL107 ASP108 THR109 ASP110 TYR111 ASP112 THR113 TYR114 ALA115 VAL116 GLN117 TYR118 SER119 CYS120 ARG121 LEU122 LEU123 ASN124 LEU125 ASP126 GLY127 THR128 CYS129 ALA130 ASP131 SER132 TYR133 SER134 PHE135 VAL136 PHE137 SER138 ARG139 ASP140 PRO141 ASN142 GLY143 LEU144 PRO145 PRO146 GLU147 ALA148 GLN149 LYS150 ILE151 VAL152 ARG153 GLN154 ARG155 GLN156 GLU157 GLU158 LEU159 CYS160 LEU161 ALA162 ARG163 GLN164 TYR165 ARG166 LEU167 ILE168 VAL169 HIS170 ASN171 GLY172 TYR173 CYS174
Unit 7 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 LEU15 GLY16 GLN17 ARG18 ALA19 THR20 ILE21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 ASP30 SER31 TYR32 GLY33 ASN34 SER35 PHE36 MET37 HIS38 TRP39 TYR40 GLN41 GLN42 LYS43 PRO44 GLY45 GLN46 PRO47 PRO48 LYS49 LEU50 LEU51 ILE52 TYR53 ARG54 ALA55 SER56 ASN57 LEU58 GLU59 SER60 GLY61 ILE62 PRO63 ALA64 ARG65 PHE66 SER67 GLY68 SER69 GLY70 SER71 ARG72 THR73 ASP74 PHE75 THR76 LEU77 THR78 ILE79 ASN80 PRO81 VAL82 GLU83 ALA84 ASP85 ASP86 VAL87 ALA88 THR89 TYR90 TYR91 CYS92 GLN93 GLN94 SER95 ASN96 GLU97 ASP98 PRO99 TYR100 THR101 PHE102 GLY103 GLY104 GLY105 THR106 LYS107 LEU108 GLU109 ILE110 LYS111 ARG112 ALA113 ASP114 ALA115 ALA116 PRO117 THR118 VAL119 SER120 ILE121 PHE122 PRO123 PRO124 SER125 SER126 GLU127 GLN128 LEU129 THR130 SER131 GLY132 GLY133 ALA134 SER135 VAL136 VAL137 CYS138 PHE139 LEU140 ASN141 ASN142 PHE143 TYR144 PRO145 LYS146 ASP147 ILE148 ASN149 VAL150 LYS151 TRP152 LYS153 ILE154 ASP155 GLY156 SER157 GLU158 ARG159 GLN160 ASN161 GLY162 VAL163 LEU164 ASN165 SER166 TRP167 THR168 ASP169 GLN170 ASP171 SER172 LYS173 ASP174 SER175 THR176 TYR177 SER178 MET179 SER180 SER181 THR182 LEU183 THR184 LEU185 THR186 LYS187 ASP188 GLU189 TYR190 GLU191 ARG192 HIS193 ASN194 SER195 TYR196 THR197 CYS198 GLU199 ALA200 THR201 HIS202 LYS203 THR204 SER205 THR206 SER207 PRO208 ILE209 VAL210 LYS211 SER212 PHE213 ASN214 ARG215
Unit 8 ASP1 VAL2 GLN3 LEU4 GLN5 GLU6 SER7 GLY8 THR9 VAL10 LEU11 ALA12 ARG13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 MET20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 SER28 PHE29 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 ILE37 LYS38 GLN39 ARG40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 GLY50 VAL51 TYR52 PRO53 GLY54 ASP55 SER56 HIS57 THR58 SER59 TYR60 ASN61 GLN62 LYS63 PHE64 LYS65 GLY66 LYS67 ALA68 LYS69 LEU70 THR71 ALA72 VAL73 THR74 SER75 ALA76 SER77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 THR87 ASN88 GLU89 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 THR97 ARG98 SER99 GLY100 PHE101 ASP102 TYR103 GLY104 ASN105 GLU106 ASP107 TRP108 GLY109 GLN110 GLY111 THR112 THR113 LEU114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 GLY132 SER133 ALA134 ALA135 GLN136 THR137 ASN138 SER139 MET140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 PRO154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER161 GLY162 SER163 LEU164 SER165 SER166 GLY167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 VAL174 LEU175 GLN176 SER177 ASP178 LEU179 TYR180 THR181 LEU182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 PRO192 ARG193 PRO194 SER195 GLU196 THR197 VAL198 THR199 CYS200 ASN201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 LYS210 VAL211 ASP212 LYS213 LYS214 ILE215
Unit 9 ASP1 ILE2 VAL3 LEU4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 ALA12 VAL13 SER14 LEU15 GLY16 GLN17 ARG18 ALA19 THR20 ILE21 SER22 CYS23 ARG24 ALA25 SER26 GLU27 SER28 VAL29 ASP30 SER31 TYR32 GLY33 ASN34 SER35 PHE36 MET37 HIS38 TRP39 TYR40 GLN41 GLN42 LYS43 PRO44 GLY45 GLN46 PRO47 PRO48 LYS49 LEU50 LEU51 ILE52 TYR53 ARG54 ALA55 SER56 ASN57 LEU58 GLU59 SER60 GLY61 ILE62 PRO63 ALA64 ARG65 PHE66 SER67 GLY68 SER69 GLY70 SER71 ARG72 THR73 ASP74 PHE75 THR76 LEU77 THR78 ILE79 ASN80 PRO81 VAL82 GLU83 ALA84 ASP85 ASP86 VAL87 ALA88 THR89 TYR90 TYR91 CYS92 GLN93 GLN94 SER95 ASN96 GLU97 ASP98 PRO99 TYR100 THR101 PHE102 GLY103 GLY104 GLY105 THR106 LYS107 LEU108 GLU109 ILE110 LYS111 ARG112 ALA113 ASP114 ALA115 ALA116 PRO117 THR118 VAL119 SER120 ILE121 PHE122 PRO123 PRO124 SER125 SER126 GLU127 GLN128 LEU129 THR130 SER131 GLY132 GLY133 ALA134 SER135 VAL136 VAL137 CYS138 PHE139 LEU140 ASN141 ASN142 PHE143 TYR144 PRO145 LYS146 ASP147 ILE148 ASN149 VAL150 LYS151 TRP152 LYS153 ILE154 ASP155 GLY156 SER157 GLU158 ARG159 GLN160 ASN161 GLY162 VAL163 LEU164 ASN165 SER166 TRP167 THR168 ASP169 GLN170 ASP171 SER172 LYS173 ASP174 SER175 THR176 TYR177 SER178 MET179 SER180 SER181 THR182 LEU183 THR184 LEU185 THR186 LYS187 ASP188 GLU189 TYR190 GLU191 ARG192 HIS193 ASN194 SER195 TYR196 THR197 CYS198 GLU199 ALA200 THR201 HIS202 LYS203 THR204 SER205 THR206 SER207 PRO208 ILE209 VAL210 LYS211 SER212 PHE213 ASN214 ARG215
Unit 10 ASP1 VAL2 GLN3 LEU4 GLN5 GLU6 SER7 GLY8 THR9 VAL10 LEU11 ALA12 ARG13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 MET20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 SER28 PHE29 THR30 SER31 TYR32 TRP33 MET34 HIS35 TRP36 ILE37 LYS38 GLN39 ARG40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 GLY50 VAL51 TYR52 PRO53 GLY54 ASP55 SER56 HIS57 THR58 SER59 TYR60 ASN61 GLN62 LYS63 PHE64 LYS65 GLY66 LYS67 ALA68 LYS69 LEU70 THR71 ALA72 VAL73 THR74 SER75 ALA76 SER77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 THR87 ASN88 GLU89 ASP90 SER91 ALA92 VAL93 TYR94 TYR95 CYS96 THR97 ARG98 SER99 GLY100 PHE101 ASP102 TYR103 GLY104 ASN105 GLU106 ASP107 TRP108 GLY109 GLN110 GLY111 THR112 THR113 LEU114 THR115 VAL116 SER117 SER118 ALA119 LYS120 THR121 THR122 PRO123 PRO124 SER125 VAL126 TYR127 PRO128 LEU129 ALA130 PRO131 GLY132 SER133 ALA134 ALA135 GLN136 THR137 ASN138 SER139 MET140 VAL141 THR142 LEU143 GLY144 CYS145 LEU146 VAL147 LYS148 GLY149 TYR150 PHE151 PRO152 GLU153 PRO154 VAL155 THR156 VAL157 THR158 TRP159 ASN160 SER161 GLY162 SER163 LEU164 SER165 SER166 GLY167 VAL168 HIS169 THR170 PHE171 PRO172 ALA173 VAL174 LEU175 GLN176 SER177 ASP178 LEU179 TYR180 THR181 LEU182 SER183 SER184 SER185 VAL186 THR187 VAL188 PRO189 SER190 SER191 PRO192 ARG193 PRO194 SER195 GLU196 THR197 VAL198 THR199 CYS200 ASN201 VAL202 ALA203 HIS204 PRO205 ALA206 SER207 SER208 THR209 LYS210 VAL211 ASP212 LYS213 LYS214 ILE215

Ligands
Unit 11 RTL177
Unit 12 RTL178

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany