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Sequence, Chains, Asymmetric and Biological Units

Title CSL (LAG-1) BOUND TO DNA WITH LIN-12 RAM PEPTIDE, P212121
Keywords PROTEIN-DNA COMPLEX, SIGNALING, TRANSCRIPTION, NOTCH, DNA-BI ANK REPEAT, DEVELOPMENTAL PROTEIN, DIFFERENTIATION, EGF-LIK GLYCOPROTEIN, MEMBRANE, TRANSMEMBRANE, DNA BINDING PROTEIN- COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3BRD     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule    B 15 311 0
2  Other macromolecule    C 15 298 0
3  Protein   LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM A  A 427 3402 0
4  Protein   PROTEIN LIN-12  D 15 125 0
5  Ligand    C 1 0 4
6  Ligand   LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM A  A 8 0 32
7  Ligand   PROTEIN LIN-12  D 1 0 4
8 Water     131 0 131
total       613 4136 171

Proteins
Unit 3 VAL195 GLN196 SER197 LEU198 THR199 SER200 ASP201 ARG202 MET203 ILE204 ASP205 PHE206 LEU207 SER208 ASN209 LYS210 GLU211 LYS212 TYR213 GLU214 CYS215 VAL216 ILE217 SER218 ILE219 PHE220 HIS221 ALA222 LYS223 VAL224 ALA225 GLN226 LYS227 SER228 TYR229 GLY230 ASN231 GLU232 LYS233 ARG234 PHE235 PHE236 CYS237 PRO238 PRO239 PRO240 CYS241 ILE242 TYR243 LEU244 ILE245 GLY246 GLN247 GLY248 TRP249 LYS250 LEU251 LYS252 LYS253 ASP254 ARG255 VAL256 ALA257 GLN258 LEU259 TYR260 LYS261 THR262 LEU263 GLN281 GLN282 ALA283 THR284 GLU285 LEU286 VAL287 ALA288 TYR289 ILE290 GLY291 ILE292 GLY293 SER294 ASP295 THR296 SER297 GLU298 ARG299 GLN300 GLN301 LEU302 ASP303 PHE304 PRO319 ASN320 ILE321 TYR322 ASP323 TYR324 CYS325 ALA326 ALA327 LYS328 THR329 LEU330 TYR331 ILE332 SER333 ASP334 SER335 ASP336 LYS337 ARG338 LYS339 TYR340 PHE341 ASP342 LEU343 ASN344 ALA345 GLN346 PHE347 PHE348 TYR349 GLY350 CYS351 GLY352 MET353 GLU354 ILE355 GLY356 GLY357 PHE358 VAL359 SER360 GLN361 ARG362 ILE363 LYS364 VAL365 ILE366 SER367 LYS368 PRO369 SER370 LYS371 LYS372 LYS373 THR379 ASP380 CYS381 LYS382 TYR383 LEU384 CYS385 ILE386 ALA387 SER388 GLY389 THR390 LYS391 VAL392 ALA393 LEU394 PHE395 ASN396 ARG397 LEU398 ARG399 SER400 GLN401 THR402 VAL403 SER404 THR405 ARG406 TYR407 LEU408 HIS409 VAL410 GLU411 GLY412 ASN413 ALA414 PHE415 HIS416 ALA417 SER418 SER419 THR420 LYS421 TRP422 GLY423 ALA424 PHE425 THR426 ILE427 HIS428 LEU429 PHE430 ASP431 ASP432 GLN437 GLU438 THR439 ASP440 ASN441 PHE442 ALA443 VAL444 ARG445 ASP446 GLY447 PHE448 VAL449 TYR450 TYR451 GLY452 SER453 VAL454 VAL455 LYS456 LEU457 VAL458 ASP459 SER460 VAL461 THR462 GLY463 ILE464 ALA465 LEU466 PRO467 ARG468 LEU469 ARG470 ILE471 ARG472 LYS473 VAL474 ASP475 LYS476 GLN477 GLN478 VAL479 ILE480 LEU481 ASP482 ALA483 SER484 CYS485 SER486 GLU487 GLU488 PRO489 VAL490 SER491 GLN492 LEU493 HIS494 LYS495 CYS496 ALA497 PHE498 GLN499 MET500 ILE501 ASP502 ASN503 GLU504 LEU505 VAL506 TYR507 LEU508 CYS509 LEU510 SER511 HIS512 ASP513 LYS514 ILE515 ILE516 GLN517 HIS518 GLN519 ALA520 THR521 ALA522 ILE523 ASN524 GLU525 HIS526 ARG527 HIS528 GLN529 ILE530 ASN531 ASP532 GLY533 ALA534 ALA535 TRP536 THR537 ILE538 ILE539 SER540 THR541 ASP542 LYS543 ALA544 GLU545 TYR546 ARG547 PHE548 PHE549 GLU550 ALA551 MET552 GLY553 GLN554 VAL555 ALA556 ASN557 PRO558 ILE559 SER560 PRO561 CYS562 PRO563 VAL564 VAL565 GLY566 SER567 LEU568 GLU569 VAL570 ASP571 GLY572 HIS573 GLY574 GLU575 ALA576 SER577 ARG578 VAL579 GLU580 LEU581 HIS582 GLY583 ARG584 ASP585 PHE586 LYS587 PRO588 ASN589 LEU590 LYS591 VAL592 TRP593 PHE594 GLY595 ALA596 THR597 PRO598 VAL599 GLU600 THR601 THR602 PHE603 ARG604 SER605 GLU606 GLU607 SER608 LEU609 HIS610 CYS611 SER612 ILE613 PRO614 PRO615 VAL616 SER617 GLN618 VAL619 ARG620 ASN621 GLU622 GLN623 THR624 HIS625 TRP626 MET627 PHE628 THR629 ASN630 ARG631 THR632 THR633 GLY634 ASP635 VAL636 GLU637 VAL638 PRO639 ILE640 SER641 LEU642 VAL643 ARG644 ASP645 ASP646 GLY647 VAL648 VAL649 TYR650 SER651 SER652 GLY653 LEU654 THR655 PHE656 SER657 TYR658 LYS659 SER660 LEU661
Unit 4 ARG937 ARG938 MET939 ILE940 ASN941 ALA942 SER943 VAL944 TRP945 MET946 PRO947 PRO948 MET949 GLU950 ASN951

Other macromolecules
Unit 1 DT1 DT2 DA3 DC4 DT5 DG6 DT7 DG8 DG9 DG10 DA11 DA12 DA13 DG14 DA15
Unit 2 DA1 DA2 DT3 DC4 DT5 DT6 DT7 DC8 DC9 DC10 DA11 DC12 DA13 DG14 DT15

Ligands
Unit 5 EDO16
Unit 6 EDO1 EDO2 EDO3 EDO4 EDO5 EDO8 EDO9 EDO10
Unit 7 EDO6

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany