|
[Image Library Home] | [Image Library Entry] |
| Title | COBALAMIN-DEPENDENT METHIONINE SYNTHASE (1-566) FROM THERMOTOGA MARITIMA COMPLEXED WITH ZN2+ AND HOMOCYSTEINE | |
| Keywords | METH, TRANSFERASE, TIM BARREL, HOMOCYSTEINE, ZINC, ZINC INVERSION, METHYLTRANSFERASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 3BOF | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | 5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINE METHYLTRANSFERASE | A | 560 | 4402 | 0 |
| 2 | Protein | 5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINE METHYLTRANSFERASE | B | 556 | 4361 | 0 |
| 3 | Ligand | 5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINE METHYLTRANSFERASE | A | 4 | 0 | 11 |
| 4 | Ligand | 5-METHYLTETRAHYDROFOLATE S-HOMOCYSTEINE METHYLTRANSFERASE | B | 3 | 0 | 10 |
| 5 | Water | 411 | 0 | 411 | ||
| total | 1534 | 8763 | 432 |
| Unit 1 | MET1 ARG2 ASN3 ARG4 ARG5 GLU6 VAL7 SER8 LYS9 LEU10 LEU11 SER12 GLU13 ARG14 VAL15 LEU16 LEU17 LEU18 ASP19 GLY20 ALA21 TYR22 GLY23 THR24 GLU25 PHE26 MET27 LYS28 TYR29 GLY30 TYR31 ASP32 ASP33 LEU34 PRO35 GLU36 GLU37 LEU38 ASN39 ILE40 LYS41 ALA42 PRO43 ASP44 VAL45 VAL46 LEU47 LYS48 VAL49 HIS50 ARG51 SER52 TYR53 ILE54 GLU55 SER56 GLY57 SER58 ASP59 VAL60 ILE61 LEU62 THR63 ASN64 THR65 PHE66 GLY67 ALA68 THR69 ARG70 MET71 LYS72 LEU73 ARG74 LYS75 HIS76 GLY77 LEU78 GLU79 ASP80 LYS81 LEU82 ASP83 PRO84 ILE85 VAL86 ARG87 ASN88 ALA89 VAL90 ARG91 ILE92 ALA93 ARG94 ARG95 ALA96 ALA97 GLY98 GLU99 LYS100 LEU101 VAL102 PHE103 GLY104 ASP105 ILE106 GLY107 PRO108 THR109 GLY110 GLU111 LEU112 PRO113 TYR114 PRO115 LEU116 GLY117 SER118 THR119 LEU120 PHE121 GLU122 GLU123 PHE124 TYR125 GLU126 ASN127 PHE128 ARG129 GLU130 THR131 VAL132 GLU133 ILE134 MET135 VAL136 GLU137 GLU138 GLY139 VAL140 ASP141 GLY142 ILE143 ILE144 PHE145 GLU146 THR147 PHE148 SER149 ASP150 ILE151 LEU152 GLU153 LEU154 LYS155 ALA156 ALA157 VAL158 LEU159 ALA160 ALA161 ARG162 GLU163 VAL164 SER165 ARG166 ASP167 VAL168 PHE169 LEU170 ILE171 ALA172 HIS173 MET174 THR175 PHE176 ASP177 GLU178 LYS179 GLY180 ARG181 SER182 LEU183 THR184 GLY185 THR186 ASP187 PRO188 ALA189 ASN190 PHE191 ALA192 ILE193 THR194 PHE195 ASP196 GLU197 LEU198 ASP199 ILE200 ASP201 ALA202 LEU203 GLY204 ILE205 ASN206 CYS207 SER208 LEU209 GLY210 PRO211 GLU212 GLU213 ILE214 LEU215 PRO216 ILE217 PHE218 GLN219 GLU220 LEU221 SER222 GLN223 TYR224 THR225 ASP226 LYS227 PHE228 LEU229 VAL230 VAL231 GLU232 PRO233 ASN234 ALA235 GLY236 LYS237 PRO238 ILE239 VAL240 GLU241 ASN242 GLY243 LYS244 THR245 VAL246 TYR247 PRO248 LEU249 LYS250 PRO251 HIS252 ASP253 PHE254 ALA255 VAL256 HIS257 ILE258 ASP259 SER260 TYR261 TYR262 GLU263 LEU264 GLY265 VAL266 ASN267 ILE268 PHE269 GLY270 GLY271 CYS272 CYS273 GLY274 THR275 THR276 PRO277 GLU278 HIS279 VAL280 LYS281 LEU282 PHE283 ARG284 LYS285 VAL286 LEU287 GLY288 ASN289 ARG290 LYS291 PRO292 LEU293 GLN294 ARG295 LYS296 LYS297 LYS298 ARG299 ILE300 PHE301 ALA302 VAL303 SER304 SER305 PRO306 SER307 LYS308 LEU309 VAL310 THR311 PHE312 ASP313 HIS314 PHE315 VAL316 VAL317 ILE318 GLY319 GLU320 ARG321 ILE322 ASN323 PRO324 ALA325 GLY326 ARG327 LYS328 LYS329 LEU330 TRP331 ALA332 GLU333 MET334 GLN335 LYS336 GLY337 ASN338 GLU339 GLU340 ILE341 VAL342 ILE343 LYS344 GLU345 ALA346 LYS347 THR348 GLN349 VAL350 GLU351 LYS352 GLY353 ALA354 GLU355 VAL356 LEU357 ASP358 VAL359 ASN360 PHE361 GLY362 ILE363 GLU364 SER365 GLN366 ILE367 ASP368 VAL369 ARG370 TYR371 VAL372 GLU373 LYS374 ILE375 VAL376 GLN377 THR378 LEU379 PRO380 TYR381 VAL382 SER383 ASN384 VAL385 PRO386 LEU387 SER388 LEU389 ASP390 ILE391 GLN392 ASN393 VAL394 ASP395 LEU396 THR397 GLU398 ARG399 ALA400 LEU401 ARG402 ALA403 TYR404 PRO405 GLY406 ARG407 SER408 LEU409 PHE410 ASN411 SER412 ALA413 LYS414 VAL415 ASP416 GLU417 GLU418 GLU419 LEU420 GLU421 MET422 LYS423 ILE424 ASN425 LEU426 LEU427 LYS428 LYS429 TYR430 GLY431 GLY432 THR433 LEU434 ILE435 VAL436 LEU437 LEU438 MET439 GLY440 LYS441 ASP442 VAL443 PRO444 LYS445 SER446 PHE447 GLU448 GLU449 ARG450 LYS451 GLU452 TYR453 PHE454 GLU455 LYS456 ALA457 LEU458 LYS459 ILE460 LEU461 GLU462 ARG463 HIS464 ASP465 PHE466 SER467 ASP468 ARG469 VAL470 ILE471 PHE472 ASP473 PRO474 GLY475 VAL476 LEU477 PRO478 LEU479 GLY480 ALA481 GLU482 GLY483 LYS484 PRO485 VAL486 GLU487 VAL488 LEU489 LYS490 THR491 ILE492 GLU493 PHE494 ILE495 SER496 SER497 LYS498 GLY499 PHE500 ASN501 THR502 THR503 VAL504 GLY505 LEU506 SER507 ASN508 LEU509 SER510 PHE511 GLY512 LEU513 PRO514 ASP515 ARG516 SER517 TYR518 TYR519 ASN520 THR521 ALA522 PHE523 LEU524 VAL525 LEU526 GLY527 ILE528 SER529 LYS530 GLY531 LEU532 SER533 SER534 ALA535 ILE536 MET537 ASN538 PRO539 LEU540 ASP541 GLU542 THR543 LEU544 MET545 LYS546 THR547 LEU548 ASN549 ALA550 THR551 LEU552 VAL553 ILE554 LEU555 GLU556 LYS557 LYS558 GLU559 LEU560 |
| Unit 2 | MET1 ARG2 ASN3 ARG4 ARG5 GLU6 VAL7 SER8 LYS9 LEU10 LEU11 SER12 GLU13 ARG14 VAL15 LEU16 LEU17 LEU18 ASP19 GLY20 ALA21 TYR22 GLY23 THR24 GLU25 PHE26 MET27 LYS28 TYR29 GLY30 TYR31 ASP32 ASP33 LEU34 PRO35 GLU36 GLU37 LEU38 ASN39 ILE40 LYS41 ALA42 PRO43 ASP44 VAL45 VAL46 LEU47 LYS48 VAL49 HIS50 ARG51 SER52 TYR53 ILE54 GLU55 SER56 GLY57 SER58 ASP59 VAL60 ILE61 LEU62 THR63 ASN64 THR65 PHE66 GLY67 ALA68 THR69 ARG70 MET71 LYS72 LEU73 ARG74 LYS75 HIS76 GLY77 LEU78 GLU79 ASP80 LYS81 LEU82 ASP83 PRO84 ILE85 VAL86 ARG87 ASN88 ALA89 VAL90 ARG91 ILE92 ALA93 ARG94 ARG95 ALA96 ALA97 GLY98 GLU99 LYS100 LEU101 VAL102 PHE103 GLY104 ASP105 ILE106 GLY107 PRO108 THR109 GLY110 GLU111 LEU112 PRO113 TYR114 PRO115 LEU116 GLY117 SER118 THR119 LEU120 PHE121 GLU122 GLU123 PHE124 TYR125 GLU126 ASN127 PHE128 ARG129 GLU130 THR131 VAL132 GLU133 ILE134 MET135 VAL136 GLU137 GLU138 GLY139 VAL140 ASP141 GLY142 ILE143 ILE144 PHE145 GLU146 THR147 PHE148 SER149 ASP150 ILE151 LEU152 GLU153 LEU154 LYS155 ALA156 ALA157 VAL158 LEU159 ALA160 ALA161 ARG162 GLU163 VAL164 SER165 ARG166 ASP167 VAL168 PHE169 LEU170 ILE171 ALA172 HIS173 MET174 THR175 PHE176 ASP177 GLU178 LYS179 GLY180 ARG181 SER182 LEU183 THR184 GLY185 THR186 ASP187 PRO188 ALA189 ASN190 PHE191 ALA192 ILE193 THR194 PHE195 ASP196 GLU197 LEU198 ASP199 ILE200 ASP201 ALA202 LEU203 GLY204 ILE205 ASN206 CYS207 SER208 LEU209 GLY210 PRO211 GLU212 GLU213 ILE214 LEU215 PRO216 ILE217 PHE218 GLN219 GLU220 LEU221 SER222 GLN223 TYR224 THR225 ASP226 LYS227 PHE228 LEU229 VAL230 VAL231 GLU232 PRO233 ASN234 ALA235 GLY236 LYS237 PRO238 ILE239 LYS244 THR245 VAL246 TYR247 PRO248 LEU249 LYS250 PRO251 HIS252 ASP253 PHE254 ALA255 VAL256 HIS257 ILE258 ASP259 SER260 TYR261 TYR262 GLU263 LEU264 GLY265 VAL266 ASN267 ILE268 PHE269 GLY270 GLY271 CYS272 CYS273 GLY274 THR275 THR276 PRO277 GLU278 HIS279 VAL280 LYS281 LEU282 PHE283 ARG284 LYS285 VAL286 LEU287 GLY288 ASN289 ARG290 LYS291 PRO292 LEU293 GLN294 ARG295 LYS296 LYS297 LYS298 ARG299 ILE300 PHE301 ALA302 VAL303 SER304 SER305 PRO306 SER307 LYS308 LEU309 VAL310 THR311 PHE312 ASP313 HIS314 PHE315 VAL316 VAL317 ILE318 GLY319 GLU320 ARG321 ILE322 ASN323 PRO324 ALA325 GLY326 ARG327 LYS328 LYS329 LEU330 TRP331 ALA332 GLU333 MET334 GLN335 LYS336 GLY337 ASN338 GLU339 GLU340 ILE341 VAL342 ILE343 LYS344 GLU345 ALA346 LYS347 THR348 GLN349 VAL350 GLU351 LYS352 GLY353 ALA354 GLU355 VAL356 LEU357 ASP358 VAL359 ASN360 PHE361 GLY362 ILE363 GLU364 SER365 GLN366 ILE367 ASP368 VAL369 ARG370 TYR371 VAL372 GLU373 LYS374 ILE375 VAL376 GLN377 THR378 LEU379 PRO380 TYR381 VAL382 SER383 ASN384 VAL385 PRO386 LEU387 SER388 LEU389 ASP390 ILE391 GLN392 ASN393 VAL394 ASP395 LEU396 THR397 GLU398 ARG399 ALA400 LEU401 ARG402 ALA403 TYR404 PRO405 GLY406 ARG407 SER408 LEU409 PHE410 ASN411 SER412 ALA413 LYS414 VAL415 ASP416 GLU417 GLU418 GLU419 LEU420 GLU421 MET422 LYS423 ILE424 ASN425 LEU426 LEU427 LYS428 LYS429 TYR430 GLY431 GLY432 THR433 LEU434 ILE435 VAL436 LEU437 LEU438 MET439 GLY440 LYS441 ASP442 VAL443 PRO444 LYS445 SER446 PHE447 GLU448 GLU449 ARG450 LYS451 GLU452 TYR453 PHE454 GLU455 LYS456 ALA457 LEU458 LYS459 ILE460 LEU461 GLU462 ARG463 HIS464 ASP465 PHE466 SER467 ASP468 ARG469 VAL470 ILE471 PHE472 ASP473 PRO474 GLY475 VAL476 LEU477 PRO478 LEU479 GLY480 ALA481 GLU482 GLY483 LYS484 PRO485 VAL486 GLU487 VAL488 LEU489 LYS490 THR491 ILE492 GLU493 PHE494 ILE495 SER496 SER497 LYS498 GLY499 PHE500 ASN501 THR502 THR503 VAL504 GLY505 LEU506 SER507 ASN508 LEU509 SER510 PHE511 GLY512 LEU513 PRO514 ASP515 ARG516 SER517 TYR518 TYR519 ASN520 THR521 ALA522 PHE523 LEU524 VAL525 LEU526 GLY527 ILE528 SER529 LYS530 GLY531 LEU532 SER533 SER534 ALA535 ILE536 MET537 ASN538 PRO539 LEU540 ASP541 GLU542 THR543 LEU544 MET545 LYS546 THR547 LEU548 ASN549 ALA550 THR551 LEU552 VAL553 ILE554 LEU555 GLU556 LYS557 LYS558 GLU559 LEU560 |
| Unit 3 | ZN701 K703 YT3705 HCS711 |
| Unit 4 | ZN702 K704 HCS712 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |