3BN9 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF MT-SP1 IN COMPLEX WITH FAB INHIBITOR E2
• Keywords: ANTIBODY-PROTEASE COMPLEX, PROTEIN-PROTEIN COMPLEX, ENZYME-I COMPLEX, DISEASE MUTATION, GLYCOPROTEIN, HYDROLASE, MEMBRAN POLYMORPHISM, SERINE PROTEASE, SIGNAL-ANCHOR, TRANSMEMBRANE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3BN9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MEMBRANE-TYPE SERINE PROTEASE 1	B	241	1864	0
2	Protein	E2 FAB LIGHT CHAIN	C	210	1593	0
3	Protein	E2 FAB HEAVY CHAIN	D	211	1570	0
4	Protein	MEMBRANE-TYPE SERINE PROTEASE 1	A	241	1864	0
5	Protein	E2 FAB LIGHT CHAIN	E	211	1603	0
6	Protein	E2 FAB HEAVY CHAIN	F	224	1661	0
7	Ligand	MEMBRANE-TYPE SERINE PROTEASE 1	B	6	0	24
8	Ligand	E2 FAB LIGHT CHAIN	C	3	0	13
9	Ligand	E2 FAB HEAVY CHAIN	D	1	0	4
10	Ligand	MEMBRANE-TYPE SERINE PROTEASE 1	A	3	0	12
11	Ligand	E2 FAB LIGHT CHAIN	E	2	0	9
12	Water			824	0	824
total				2177	10155	886

Proteins

Unit 1	VAL 16 VAL 17 GLY 18 GLY 19 THR 20 ASP 21 ALA 22 ASP 23 GLU 24 GLY 25 GLU 26 TRP 27 PRO 28 TRP 29 GLN 30 VAL 31 SER 32 LEU 33 HIS 34 ALA 35 LEU 36 GLY 37 GLN 38 GLY 39 HIS 40 ILE 41 CYS 42 GLY 43 ALA 44 SER 45 LEU 46 ILE 47 SER 48 PRO 49 ASN 50 TRP 51 LEU 52 VAL 53 SER 54 ALA 55 ALA 56 HIS 57 CYS 58 TYR 59 ILE 60 ASP 60A ASP 60B ARG 60C GLY 60D PHE 60E ARG 60F TYR 60G SER 60H ASP 60I PRO 61 THR 62 GLN 63 TRP 64 THR 65 ALA 66 PHE 67 LEU 68 GLY 69 LEU 70 HIS 71 ASP 72 GLN 73 SER 74 GLN 75 ARG 76 SER 77 ALA 77A PRO 78 GLY 79 VAL 80 GLN 81 GLU 82 ARG 83 ARG 84 LEU 85 LYS 86 ARG 87 ILE 88 ILE 89 SER 90 HIS 91 PRO 92 PHE 93 PHE 94 ASN 95 ASP 96 PHE 97 THR 98 PHE 99 ASP 100 TYR 101 ASP 102 ILE 103 ALA 104 LEU 105 LEU 106 GLU 107 LEU 108 GLU 109 LYS 110 PRO 111 ALA 112 GLU 113 TYR 114 SER 115 SER 116 MET 117 VAL 118 ARG 119 PRO 120 ILE 121 SER 122 LEU 123 PRO 124 ASP 125 ALA 126 SER 127 HIS 128 VAL 129 PHE 130 PRO 131 ALA 132 GLY 133 LYS 134 ALA 135 ILE 136 TRP 137 VAL 138 THR 139 GLY 140 TRP 141 GLY 142 HIS 143 THR 144 GLN 145 TYR 146 GLY 147 GLY 148 THR 150 GLY 151 ALA 152 LEU 153 ILE 154 LEU 155 GLN 156 LYS 157 GLY 158 GLU 159 ILE 160 ARG 161 VAL 162 ILE 163 ASN 164 GLN 165 THR 166 THR 167 CYS 168 GLU 169 ASN 170 LEU 171 LEU 172 PRO 173 GLN 174 GLN 175 ILE 176 THR 177 PRO 178 ARG 179 MET 180 MET 181 CYS 182 VAL 183 GLY 184 PHE 184A LEU 185 SER 186 GLY 186A GLY 187 VAL 188 ASP 189 SER 190 CYS 191 GLN 192 GLY 193 ASP 194 SER 195 GLY 196 GLY 197 PRO 198 LEU 199 SER 200 SER 201 VAL 202 GLU 203 ALA 204 ASP 204A GLY 205 ARG 206 ILE 207 PHE 208 GLN 209 ALA 210 GLY 211 VAL 212 VAL 213 SER 214 TRP 215 GLY 216 ASP 217 GLY 219 CYS 220 ALA 221 GLN 221A ARG 222 ASN 223 LYS 224 PRO 225 GLY 226 VAL 227 TYR 228 THR 229 ARG 230 LEU 231 PRO 232 LEU 233 PHE 234 ARG 235 ASP 236 TRP 237 ILE 238 LYS 239 GLU 240 ASN 241 THR 242 GLY 243 VAL 244
Unit 2	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 GLY 28 ILE 29 SER 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 SER 53 LEU 54 GLN 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 HIS 91 GLY 92 ASN 93 LEU 94 PRO 95 TYR 96 THR 97 PHE 98 GLY 99 ASP 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210
Unit 3	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 ALA 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 ALA 50 ILE 51 SER 52 GLY 52A SER 53 GLY 54 GLY 55 SER 56 THR 57 TYR 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLN 81 MET 82 SER 82A SER 82B LEU 82C ARG 83 ALA 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 PRO 95 TYR 96 LEU 97 THR 98 TYR 99 PRO 100 GLN 100A ARG 100B ARG 100C GLY 100D PRO 100E GLN 100F ASN 100G VAL 100H SER 100I PRO 100J PHE 100K ASP 101 ASN 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214
Unit 4	VAL 16 VAL 17 GLY 18 GLY 19 THR 20 ASP 21 ALA 22 ASP 23 GLU 24 GLY 25 GLU 26 TRP 27 PRO 28 TRP 29 GLN 30 VAL 31 SER 32 LEU 33 HIS 34 ALA 35 LEU 36 GLY 37 GLN 38 GLY 39 HIS 40 ILE 41 CYS 42 GLY 43 ALA 44 SER 45 LEU 46 ILE 47 SER 48 PRO 49 ASN 50 TRP 51 LEU 52 VAL 53 SER 54 ALA 55 ALA 56 HIS 57 CYS 58 TYR 59 ILE 60 ASP 60A ASP 60B ARG 60C GLY 60D PHE 60E ARG 60F TYR 60G SER 60H ASP 60I PRO 61 THR 62 GLN 63 TRP 64 THR 65 ALA 66 PHE 67 LEU 68 GLY 69 LEU 70 HIS 71 ASP 72 GLN 73 SER 74 GLN 75 ARG 76 SER 77 ALA 77A PRO 78 GLY 79 VAL 80 GLN 81 GLU 82 ARG 83 ARG 84 LEU 85 LYS 86 ARG 87 ILE 88 ILE 89 SER 90 HIS 91 PRO 92 PHE 93 PHE 94 ASN 95 ASP 96 PHE 97 THR 98 PHE 99 ASP 100 TYR 101 ASP 102 ILE 103 ALA 104 LEU 105 LEU 106 GLU 107 LEU 108 GLU 109 LYS 110 PRO 111 ALA 112 GLU 113 TYR 114 SER 115 SER 116 MET 117 VAL 118 ARG 119 PRO 120 ILE 121 SER 122 LEU 123 PRO 124 ASP 125 ALA 126 SER 127 HIS 128 VAL 129 PHE 130 PRO 131 ALA 132 GLY 133 LYS 134 ALA 135 ILE 136 TRP 137 VAL 138 THR 139 GLY 140 TRP 141 GLY 142 HIS 143 THR 144 GLN 145 TYR 146 GLY 147 GLY 148 THR 150 GLY 151 ALA 152 LEU 153 ILE 154 LEU 155 GLN 156 LYS 157 GLY 158 GLU 159 ILE 160 ARG 161 VAL 162 ILE 163 ASN 164 GLN 165 THR 166 THR 167 CYS 168 GLU 169 ASN 170 LEU 171 LEU 172 PRO 173 GLN 174 GLN 175 ILE 176 THR 177 PRO 178 ARG 179 MET 180 MET 181 CYS 182 VAL 183 GLY 184 PHE 184A LEU 185 SER 186 GLY 186A GLY 187 VAL 188 ASP 189 SER 190 CYS 191 GLN 192 GLY 193 ASP 194 SER 195 GLY 196 GLY 197 PRO 198 LEU 199 SER 200 SER 201 VAL 202 GLU 203 ALA 204 ASP 204A GLY 205 ARG 206 ILE 207 PHE 208 GLN 209 ALA 210 GLY 211 VAL 212 VAL 213 SER 214 TRP 215 GLY 216 ASP 217 GLY 219 CYS 220 ALA 221 GLN 221A ARG 222 ASN 223 LYS 224 PRO 225 GLY 226 VAL 227 TYR 228 THR 229 ARG 230 LEU 231 PRO 232 LEU 233 PHE 234 ARG 235 ASP 236 TRP 237 ILE 238 LYS 239 GLU 240 ASN 241 THR 242 GLY 243 VAL 244
Unit 5	ASP 1 ILE 2 GLN 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 GLY 28 ILE 29 SER 30 SER 31 TYR 32 LEU 33 ALA 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 LYS 42 ALA 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 SER 53 LEU 54 GLN 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLN 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 VAL 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 HIS 91 GLY 92 ASN 93 LEU 94 PRO 95 TYR 96 THR 97 PHE 98 GLY 99 ASP 100 GLY 101 THR 102 LYS 103 VAL 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 6	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 ALA 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 ALA 50 ILE 51 SER 52 GLY 52A SER 53 GLY 54 GLY 55 SER 56 THR 57 TYR 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 SER 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLN 81 MET 82 SER 82A SER 82B LEU 82C ARG 83 ALA 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 PRO 95 TYR 96 LEU 97 THR 98 TYR 99 PRO 100 GLN 100A ARG 100B ARG 100C GLY 100D PRO 100E GLN 100F ASN 100G VAL 100H SER 100I PRO 100J PHE 100K ASP 101 ASN 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 MET 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 132 GLY 133 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214

Ligands

Unit 7	EDO 1 EDO 3 EDO 4 EDO 6 EDO 7 EDO 8
Unit 8	SO4 215 EDO 216 EDO 217
Unit 9	EDO 243
Unit 10	EDO 2 EDO 12 EDO 13
Unit 11	SO4 215 EDO 216