3BGF - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY CRYSTAL STRUCTURE OF THE SARS CORONAVIRUS SPIKE RECEPT DOMAIN IN COMPLEX WITH F26G19 FAB
• Keywords: ANTIGEN-ANTIBODY COMPLEX, ENVELOPE PROTEIN, GLYCOPROTEIN, HO INTERACTION, MEMBRANE, TRANSMEMBRANE, VIRION, VIRULENCE, VI PROTEIN-IMMUNE SYSTEM COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3BGF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SPIKE PROTEIN S1	S	179	1440	0
2	Protein	SPIKE PROTEIN S1	A	178	1429	0
3	Protein	F26G19 FAB	L	212	1649	0
4	Protein	F26G19 FAB	H	216	1632	0
5	Protein	F26G19 FAB	C	210	1629	0
6	Protein	F26G19 FAB	B	216	1632	0
7	Water			6	0	6
total				1217	9411	6

Proteins

Unit 1	CYS 323 PRO 324 PHE 325 GLY 326 GLU 327 VAL 328 PHE 329 ASN 330 ALA 331 THR 332 LYS 333 PHE 334 PRO 335 SER 336 VAL 337 TYR 338 ALA 339 TRP 340 GLU 341 ARG 342 LYS 343 LYS 344 ILE 345 SER 346 ASN 347 CYS 348 VAL 349 ALA 350 ASP 351 TYR 352 SER 353 VAL 354 LEU 355 TYR 356 ASN 357 SER 358 THR 359 PHE 360 PHE 361 SER 362 THR 363 PHE 364 LYS 365 CYS 366 TYR 367 GLY 368 VAL 369 SER 370 ALA 371 THR 372 LYS 373 LEU 374 ASN 375 ASP 376 LEU 377 CYS 378 PHE 379 SER 380 ASN 381 VAL 382 TYR 383 ALA 384 ASP 385 SER 386 PHE 387 VAL 388 VAL 389 LYS 390 GLY 391 ASP 392 ASP 393 VAL 394 ARG 395 GLN 396 ILE 397 ALA 398 PRO 399 GLY 400 GLN 401 THR 402 GLY 403 VAL 404 ILE 405 ALA 406 ASP 407 TYR 408 ASN 409 TYR 410 LYS 411 LEU 412 PRO 413 ASP 414 ASP 415 PHE 416 MET 417 GLY 418 CYS 419 VAL 420 LEU 421 ALA 422 TRP 423 ASN 424 THR 425 ARG 426 ASN 427 ILE 428 ASP 429 ALA 430 THR 431 SER 432 THR 433 GLY 434 ASN 435 TYR 436 ASN 437 TYR 438 LYS 439 TYR 440 ARG 441 TYR 442 LEU 443 ARG 444 HIS 445 GLY 446 LYS 447 LEU 448 ARG 449 PRO 450 PHE 451 GLU 452 ARG 453 ASP 454 ILE 455 SER 456 ASN 457 VAL 458 PRO 459 PHE 460 SER 461 PRO 462 ASP 463 GLY 464 LYS 465 PRO 466 CYS 467 THR 468 PRO 469 PRO 470 ALA 471 LEU 472 ASN 473 CYS 474 TYR 475 TRP 476 PRO 477 LEU 478 ASN 479 ASP 480 TYR 481 GLY 482 PHE 483 TYR 484 THR 485 THR 486 THR 487 GLY 488 ILE 489 GLY 490 TYR 491 GLN 492 PRO 493 TYR 494 ARG 495 VAL 496 VAL 497 VAL 498 LEU 499 SER 500 PHE 501
Unit 2	CYS 323 PRO 324 PHE 325 GLY 326 GLU 327 VAL 328 PHE 329 ASN 330 ALA 331 THR 332 LYS 333 PHE 334 PRO 335 SER 336 VAL 337 TYR 338 ALA 339 TRP 340 GLU 341 ARG 342 LYS 343 LYS 344 ILE 345 SER 346 ASN 347 CYS 348 VAL 349 ALA 350 ASP 351 TYR 352 SER 353 VAL 354 LEU 355 SER 358 THR 359 PHE 360 PHE 361 SER 362 THR 363 PHE 364 LYS 365 CYS 366 TYR 367 GLY 368 VAL 369 SER 370 ALA 371 THR 372 LYS 373 LEU 374 ASN 375 ASP 376 LEU 377 CYS 378 PHE 379 SER 380 ASN 381 VAL 382 TYR 383 ALA 384 ASP 385 SER 386 PHE 387 VAL 388 VAL 389 LYS 390 GLY 391 ASP 392 ASP 393 VAL 394 ARG 395 GLN 396 ILE 397 ALA 398 PRO 399 GLY 400 GLN 401 THR 402 GLY 403 VAL 404 ILE 405 ALA 406 ASP 407 TYR 408 ASN 409 TYR 410 LYS 411 LEU 412 PRO 413 ASP 414 ASP 415 PHE 416 MET 417 GLY 418 CYS 419 VAL 420 LEU 421 ALA 422 TRP 423 ASN 424 THR 425 ARG 426 ASN 427 ILE 428 ASP 429 ALA 430 THR 431 SER 432 THR 433 GLY 434 ASN 435 TYR 436 ASN 437 TYR 438 LYS 439 TYR 440 ARG 441 TYR 442 LEU 443 ARG 444 HIS 445 GLY 446 LYS 447 LEU 448 ARG 449 PRO 450 PHE 451 GLU 452 ARG 453 ASP 454 ILE 455 SER 456 ASN 457 VAL 458 PRO 459 PHE 460 SER 461 PRO 462 ASP 463 GLY 464 LYS 465 PRO 466 CYS 467 THR 468 PRO 469 PRO 470 ALA 471 LEU 472 ASN 473 CYS 474 TYR 475 TRP 476 PRO 477 LEU 478 ASN 479 ASP 480 TYR 481 GLY 482 PHE 483 TYR 484 THR 485 THR 486 THR 487 GLY 488 ILE 489 GLY 490 TYR 491 GLN 492 PRO 493 TYR 494 ARG 495 VAL 496 VAL 497 VAL 498 LEU 499 SER 500 PHE 501 GLU 502
Unit 3	ASP 1 ILE 2 LEU 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 VAL 19 SER 20 LEU 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 GLU 28 ILE 29 SER 30 GLY 31 TYR 32 LEU 33 SER 34 TRP 35 LEU 36 GLN 37 GLU 38 LYS 39 PRO 40 ASP 41 GLY 42 THR 43 ILE 44 LYS 45 ARG 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 THR 53 LEU 54 ASP 55 SER 56 GLY 57 VAL 58 PRO 59 LYS 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 SER 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLU 79 SER 80 GLU 81 ASP 82 PHE 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 LEU 89 GLN 90 TYR 91 VAL 92 SER 93 TYR 94 PRO 95 TRP 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 ASN 212
Unit 4	GLU 1 VAL 2 GLN 3 LEU 4 GLU 5 GLU 6 SER 7 GLY 8 THR 9 VAL 10 LEU 11 ALA 12 ARG 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 MET 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 THR 31 TYR 32 ARG 33 MET 34 HIS 35 TRP 36 ILE 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 ALA 50 ILE 51 TYR 52 PRO 52A GLY 53 ASN 54 SER 55 ASP 56 THR 57 THR 58 TYR 59 ASN 60 GLN 61 LYS 62 PHE 63 LYS 64 ASP 65 LYS 66 ALA 67 LYS 68 LEU 69 THR 70 ALA 71 VAL 72 THR 73 SER 74 THR 75 SER 76 SER 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 ASN 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 THR 93 ARG 94 GLU 95 GLY 96 ILE 97 PRO 98 GLN 99 LEU 100 LEU 100A ARG 100B THR 100C LEU 100D ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 VAL 127 CYS 128 GLY 135 SER 136 SER 137 VAL 138 THR 139 LEU 140 GLY 141 CYS 142 LEU 143 VAL 144 LYS 145 GLY 146 TYR 147 PHE 148 PRO 149 GLU 150 PRO 151 VAL 152 THR 153 LEU 154 THR 155 TRP 156 ASN 157 SER 158 GLY 159 SER 160 LEU 161 SER 162 SER 163 GLY 164 VAL 165 HIS 166 THR 167 PHE 168 PRO 169 ALA 170 VAL 171 LEU 172 GLN 173 SER 174 ASP 175 LEU 176 TYR 177 THR 178 LEU 179 SER 180 SER 181 SER 182 VAL 183 THR 184 VAL 185 THR 186 SER 187 SER 188 THR 189 TRP 190 PRO 191 SER 192 GLN 193 SER 194 ILE 195 THR 196 CYS 197 ASN 198 VAL 199 ALA 200 HIS 201 PRO 202 ALA 203 SER 204 SER 205 THR 206 LYS 207 VAL 208 ASP 209 LYS 210 LYS 211 ILE 212 GLU 213 PRO 214
Unit 5	ASP 1 ILE 2 LEU 3 MET 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 VAL 19 SER 20 LEU 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 GLU 28 ILE 29 SER 30 GLY 31 TYR 32 LEU 33 SER 34 TRP 35 LEU 36 GLN 37 GLU 38 LYS 39 PRO 40 ASP 41 GLY 42 THR 43 ILE 44 LYS 45 ARG 46 LEU 47 ILE 48 TYR 49 ALA 50 ALA 51 SER 52 THR 53 LEU 54 ASP 55 SER 56 GLY 57 VAL 58 PRO 59 LYS 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 ARG 66 SER 67 GLY 68 SER 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 SER 76 SER 77 LEU 78 GLU 79 SER 80 GLU 81 ASP 82 PHE 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 LEU 89 GLN 90 TYR 91 VAL 92 SER 93 TYR 94 PRO 95 TRP 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 6	GLU 1 VAL 2 GLN 3 LEU 4 GLU 5 GLU 6 SER 7 GLY 8 THR 9 VAL 10 LEU 11 ALA 12 ARG 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 MET 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 THR 31 TYR 32 ARG 33 MET 34 HIS 35 TRP 36 ILE 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 ALA 50 ILE 51 TYR 52 PRO 52A GLY 53 ASN 54 SER 55 ASP 56 THR 57 THR 58 TYR 59 ASN 60 GLN 61 LYS 62 PHE 63 LYS 64 ASP 65 LYS 66 ALA 67 LYS 68 LEU 69 THR 70 ALA 71 VAL 72 THR 73 SER 74 THR 75 SER 76 SER 77 ALA 78 TYR 79 MET 80 GLU 81 LEU 82 SER 82A SER 82B LEU 82C THR 83 ASN 84 GLU 85 ASP 86 SER 87 ALA 88 VAL 89 TYR 90 PHE 91 CYS 92 THR 93 ARG 94 GLU 95 GLY 96 ILE 97 PRO 98 GLN 99 LEU 100 LEU 100A ARG 100B THR 100C LEU 100D ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 VAL 127 CYS 128 GLY 135 SER 136 SER 137 VAL 138 THR 139 LEU 140 GLY 141 CYS 142 LEU 143 VAL 144 LYS 145 GLY 146 TYR 147 PHE 148 PRO 149 GLU 150 PRO 151 VAL 152 THR 153 LEU 154 THR 155 TRP 156 ASN 157 SER 158 GLY 159 SER 160 LEU 161 SER 162 SER 163 GLY 164 VAL 165 HIS 166 THR 167 PHE 168 PRO 169 ALA 170 VAL 171 LEU 172 GLN 173 SER 174 ASP 175 LEU 176 TYR 177 THR 178 LEU 179 SER 180 SER 181 SER 182 VAL 183 THR 184 VAL 185 THR 186 SER 187 SER 188 THR 189 TRP 190 PRO 191 SER 192 GLN 193 SER 194 ILE 195 THR 196 CYS 197 ASN 198 VAL 199 ALA 200 HIS 201 PRO 202 ALA 203 SER 204 SER 205 THR 206 LYS 207 VAL 208 ASP 209 LYS 210 LYS 211 ILE 212 GLU 213 PRO 214