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Sequence, Chains, Asymmetric and Biological Units

Title COMPUTER-BASED REDESIGN OF A BETA SANDWICH PROTEIN SUGGESTS EXTENSIVE NEGATIVE DESIGN IS NOT REQUIRED FOR DE NOVO BETA DESIGN.
Keywords BETA SHEET, COMPUTATIONAL REDESIGNED PROTEIN, CELL ADHESION, DOMAIN, EXTRACELLULAR MATRIX, GLYCOPROTEIN, PHOSPHORYLATION SECRETED, UNKNOWN FUNCTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3B83     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TEN-D3  A 95 735 0
2  Protein   TEN-D3  B 92 708 0
3  Protein   TEN-D3  C 99 775 0
4  Protein   TEN-D3  D 91 700 0
5  Protein   TEN-D3  E 99 775 0
6  Protein   TEN-D3  F 92 708 0
7  Protein   TEN-D3  G 99 775 0
8  Protein   TEN-D3  H 94 725 0
9 Water     46 0 47
total       807 5901 47
Proteins
Unit 1 MET0 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92 GLU93 HIS94
Unit 2 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92
Unit 3 MET0 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92 GLU93 HIS94 HIS95 HIS96 HIS97 HIS98
Unit 4 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91
Unit 5 MET0 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92 GLU93 HIS94 HIS95 HIS96 HIS97 HIS98
Unit 6 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92
Unit 7 MET0 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92 GLU93 HIS94 HIS95 HIS96 HIS97 HIS98
Unit 8 MET0 LEU1 GLN2 PRO3 PRO4 PHE5 ASN6 ILE7 LYS8 VAL9 THR10 ASN11 ILE12 THR13 LEU14 THR15 THR16 ALA17 VAL18 VAL19 THR20 TRP21 GLN22 PRO23 PRO24 ILE25 LEU26 PRO27 ILE28 GLU29 GLY30 ILE31 LEU32 VAL33 THR34 PHE35 GLY36 ARG37 LYS38 ASN39 ASP40 PRO41 SER42 ASP43 GLU44 THR45 THR46 VAL47 ASP48 LEU49 THR50 SER51 SER52 ILE53 THR54 SER55 LEU56 THR57 LEU58 THR59 ASN60 LEU61 GLU62 PRO63 ASN64 THR65 THR66 TYR67 GLU68 ILE69 ARG70 ILE71 VAL72 ALA73 ARG74 ASN75 GLY76 GLN77 GLN78 TYR79 SER80 PRO81 PRO82 VAL83 SER84 THR85 THR86 PHE87 THR88 THR89 GLY90 SER91 LEU92 GLU93
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany