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Title | CRYSTAL STRUCTURE OF A MINIMALLY HINGED HAIRPIN RIBOZYME INC THE ADE38DAP MUTATION AND A 2',5' PHOSPHODIESTER LINKAGE AT ACTIVE SITE | |
Keywords | HAIRPIN RIBOZYME; 2, 6 DIAMINOPURINE; RNA; 2', 5' PHOSPHODIE LINKAGE, RNA | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3B5F | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 32 | 639 | 23 | |
2 | RNA | B | 30 | 635 | 13 | |
3 | RNA | C | 32 | 639 | 23 | |
4 | Ligand | LOOP A SUBSTRATE STRAND29-MER LOOP A AND LOOP B RIBOZYME STRAND | B | 2 | 0 | 14 |
5 | Water | 3 | 0 | 3 | ||
total | 99 | 1913 | 76 |
Unit 1 | U1 C2 C3 C4 A5 G6 U7 C8 C9 A10 C11 C12 G13 U31 C32 G33 U34 G35 G36 U37 N6G38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49 |
Unit 2 | C2 G3 G4 U5 G6 A7 G8 A9 A10 G11 G12 G13 S9L14 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 |
Unit 3 | U1 C2 C3 C4 A5 G6 U7 C8 C9 A10 C11 C12 G13 U31 C32 G33 U34 G35 G36 U37 N6G38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49 |
Unit 4 | NCO101 NCO102 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |