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| Title | CRYSTAL STRUCTURE OF MOUSE DNA METHYLTRANSFERASE 1 WITH ADOM | |
| Keywords | CXXC-TYPE ZINC FINGER/C5-METHYLTRANSFERASE FAMILY, METHYLATE RESIDUES, PREFERENTIALLY METHYLATES HEMIMETHYLATED DNA, DNA HEMI-METHYLATION, NUCLEUS, TRANSFERASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 3AV6 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | DNA (CYTOSINE-5)-METHYLTRANSFERASE 1 | A | 1135 | 9079 | 0 |
| 2 | Ligand | DNA (CYTOSINE-5)-METHYLTRANSFERASE 1 | A | 5 | 0 | 31 |
| total | 1140 | 9079 | 31 |
| Unit 1 | PRO357 LYS358 CYS359 PRO360 GLU361 CYS362 GLY363 GLN364 HIS365 LEU366 ASP367 ASP368 PRO369 ASN370 LEU371 LYS372 TYR373 GLN374 GLN375 HIS376 PRO377 GLU378 ASP379 ALA380 VAL381 ASP382 GLU383 PRO384 GLN385 MET386 LEU387 THR388 SER389 GLU390 LYS391 LEU392 SER393 THR404 TYR405 GLU406 ASP407 SER408 PRO409 MET410 HIS411 ARG412 PHE413 THR414 SER415 PHE416 SER417 VAL418 TYR419 CYS420 SER421 ARG422 GLY423 HIS424 LEU425 CYS426 PRO427 VAL428 ASP429 THR430 GLY431 LEU432 ILE433 GLU434 LYS435 ASN436 VAL437 GLU438 LEU439 TYR440 PHE441 SER442 GLY443 CYS444 ALA445 LYS446 ALA447 ILE448 HIS449 ASP450 GLU451 ASN452 PRO453 SER454 MET455 GLU456 GLY457 GLY458 ILE459 ASN460 GLY461 LYS462 ASN463 LEU464 GLY465 PRO466 ILE467 ASN468 GLN469 TRP470 TRP471 LEU472 SER473 GLY474 PHE475 ASP476 GLY477 GLY478 GLU479 LYS480 VAL481 LEU482 ILE483 GLY484 PHE485 SER486 THR487 ALA488 PHE489 ALA490 GLU491 TYR492 ILE493 LEU494 MET495 GLU496 PRO497 SER498 LYS499 GLU500 TYR501 GLU502 PRO503 ILE504 PHE505 GLY506 LEU507 MET508 GLN509 GLU510 LYS511 ILE512 TYR513 ILE514 SER515 LYS516 ILE517 VAL518 VAL519 GLU520 PHE521 LEU522 GLN523 ASN524 ASN525 PRO526 ASP527 ALA528 VAL529 TYR530 GLU531 ASP532 LEU533 ILE534 ASN535 LYS536 ILE537 GLU538 THR539 THR540 VAL541 PRO542 PRO543 SER544 THR545 ILE546 ASN547 VAL548 ASN549 ARG550 PHE551 THR552 GLU553 ASP554 SER555 LEU556 LEU557 ARG558 HIS559 ALA560 GLN561 PHE562 VAL563 VAL564 SER565 GLN566 VAL567 GLU568 SER569 TYR570 ASP571 GLU572 ALA573 LYS574 ASP575 ASP576 ASP577 GLU578 THR579 PRO580 ILE581 PHE582 LEU583 SER584 PRO585 CYS586 MET587 ARG588 ALA589 LEU590 ILE591 HIS592 LEU593 ALA594 GLY595 VAL596 SER597 LEU598 GLY599 GLN600 ARG601 ARG602 ALA603 THR604 ARG605 PRO618 THR619 LYS620 ALA621 THR622 THR623 THR624 LYS625 LEU626 VAL627 TYR628 GLN629 ILE630 PHE631 ASP632 THR633 PHE634 PHE635 SER636 GLU637 GLN638 ILE639 GLU640 ARG653 ARG654 ARG655 CYS656 GLY657 VAL658 CYS659 GLU660 VAL661 CYS662 GLN663 GLN664 PRO665 GLU666 ALA688 CYS689 LEU690 LYS691 ARG692 ARG693 CYS694 PRO695 ASN696 LEU697 ALA698 VAL699 LYS700 GLU701 ALA702 ASP703 ASP704 ASP705 GLU706 GLU707 ALA708 ASP709 ASP710 GLU714 MET715 PRO716 SER717 PRO718 LYS719 LYS720 LEU721 HIS722 GLN723 GLY724 LYS725 LYS726 LYS727 LYS728 GLN729 ASN730 LYS731 ASP732 ARG733 ILE734 SER735 TRP736 LEU737 GLY738 GLN739 PRO740 MET741 LYS742 ILE743 GLU744 ARG747 THR748 TYR749 TYR750 GLN751 LYS752 VAL753 SER754 ILE755 ASP756 GLU757 GLU758 MET759 LEU760 GLU761 VAL762 GLY763 ASP764 CYS765 VAL766 SER767 VAL768 ILE769 PRO770 ASP771 ASP772 SER773 SER774 LYS775 PRO776 LEU777 TYR778 LEU779 ALA780 ARG781 VAL782 THR783 ALA784 LEU785 TRP786 GLU787 ASP788 LYS789 ASN790 GLY791 GLN792 MET793 MET794 PHE795 HIS796 ALA797 HIS798 TRP799 PHE800 CYS801 ALA802 GLY803 THR804 ASP805 THR806 VAL807 LEU808 GLY809 ALA810 THR811 SER812 ASP813 PRO814 LEU815 GLU816 LEU817 PHE818 LEU819 VAL820 GLY821 GLU822 CYS823 GLU824 ASN825 MET826 GLN827 LEU828 SER829 TYR830 ILE831 HIS832 SER833 LYS834 VAL835 LYS836 VAL837 ILE838 TYR839 LYS840 ALA841 PRO842 SER843 GLU844 ASN845 TRP846 ALA847 MET848 GLU849 GLY850 GLY851 LYS865 THR866 TYR867 PHE868 PHE869 GLN870 LEU871 TRP872 TYR873 ASN874 GLN875 GLU876 TYR877 ALA878 ARG879 PHE880 GLU881 SER882 PRO883 PRO884 LYS885 THR886 GLN887 PRO888 THR889 GLU890 ASP891 ASN892 LYS893 HIS894 LYS895 PHE896 CYS897 LEU898 SER899 CYS900 ILE901 ARG902 LEU903 ALA904 GLU905 LEU906 ARG907 GLN908 LYS909 GLU910 MET911 PRO912 LYS913 VAL914 LEU915 GLU916 GLN917 ILE918 GLU919 GLU920 VAL921 ASP922 GLY923 ARG924 VAL925 TYR926 CYS927 SER928 SER929 ILE930 THR931 LYS932 ASN933 GLY934 VAL935 VAL936 TYR937 ARG938 LEU939 GLY940 ASP941 SER942 VAL943 TYR944 LEU945 PRO946 PRO947 GLU948 ALA949 PHE950 THR951 PHE952 ASN953 ILE954 LYS955 LYS964 LYS965 ASP966 PRO967 VAL968 ASN969 GLU970 THR971 LEU972 TYR973 PRO974 GLU975 HIS976 TYR977 ARG978 LYS979 TYR980 SER981 LEU989 ASP990 ALA991 PRO992 GLU993 PRO994 TYR995 ARG996 ILE997 GLY998 ARG999 ILE1000 LYS1001 GLU1002 ILE1003 HIS1004 CYS1005 GLY1006 LYS1007 LYS1008 LYS1009 GLY1010 LYS1011 VAL1012 ASN1013 GLU1014 ALA1015 ASP1016 ILE1017 LYS1018 LEU1019 ARG1020 LEU1021 TYR1022 LYS1023 PHE1024 TYR1025 ARG1026 PRO1027 GLU1028 ASN1029 THR1030 HIS1031 ARG1032 SER1033 TYR1034 ASN1035 GLY1036 SER1037 TYR1038 HIS1039 THR1040 ASP1041 ILE1042 ASN1043 MET1044 LEU1045 TYR1046 TRP1047 SER1048 ASP1049 GLU1050 GLU1051 ALA1052 VAL1053 VAL1054 ASN1055 PHE1056 SER1057 ASP1058 VAL1059 GLN1060 GLY1061 ARG1062 CYS1063 THR1064 VAL1065 GLU1066 TYR1067 GLY1068 GLU1069 ASP1070 LEU1071 LEU1072 GLU1073 SER1074 ILE1075 GLN1076 ASP1077 TYR1078 SER1079 GLN1080 GLY1081 GLY1082 PRO1083 ASP1084 ARG1085 PHE1086 TYR1087 PHE1088 LEU1089 GLU1090 ALA1091 TYR1092 ASN1093 SER1094 LYS1095 THR1096 LYS1097 ASN1098 PHE1099 GLU1100 ASP1101 PRO1102 PRO1103 ASN1104 HIS1105 ALA1106 ARG1107 SER1108 LYS1138 LEU1139 PRO1140 LYS1141 LEU1142 ARG1143 THR1144 LEU1145 ASP1146 VAL1147 PHE1148 SER1149 GLY1150 CYS1151 GLY1152 GLY1153 LEU1154 SER1155 GLU1156 GLY1157 PHE1158 HIS1159 GLN1160 ALA1161 GLY1162 ILE1163 SER1164 GLU1165 THR1166 LEU1167 TRP1168 ALA1169 ILE1170 GLU1171 MET1172 TRP1173 ASP1174 PRO1175 ALA1176 ALA1177 GLN1178 ALA1179 PHE1180 ARG1181 LEU1182 ASN1183 ASN1184 PRO1185 GLY1186 THR1187 THR1188 VAL1189 PHE1190 THR1191 GLU1192 ASP1193 CYS1194 ASN1195 VAL1196 LEU1197 LEU1198 LYS1199 LEU1200 VAL1201 MET1202 ALA1203 GLY1204 GLU1205 VAL1206 THR1207 ASN1208 SER1209 LEU1210 GLY1211 GLN1212 ARG1213 LEU1214 PRO1215 GLN1216 LYS1217 GLY1218 ASP1219 VAL1220 GLU1221 MET1222 LEU1223 CYS1224 GLY1225 GLY1226 PRO1227 PRO1228 CYS1229 GLN1230 GLY1231 PHE1232 SER1233 GLY1234 MET1235 ASN1236 ARG1237 PHE1238 ASN1239 SER1240 ARG1241 THR1242 TYR1243 SER1244 LYS1245 PHE1246 LYS1247 ASN1248 SER1249 LEU1250 VAL1251 VAL1252 SER1253 PHE1254 LEU1255 SER1256 TYR1257 CYS1258 ASP1259 TYR1260 TYR1261 ARG1262 PRO1263 ARG1264 PHE1265 PHE1266 LEU1267 LEU1268 GLU1269 ASN1270 VAL1271 ARG1272 ASN1273 PHE1274 VAL1275 SER1276 TYR1277 ARG1278 ARG1279 SER1280 MET1281 VAL1282 LEU1283 LYS1284 LEU1285 THR1286 LEU1287 ARG1288 CYS1289 LEU1290 VAL1291 ARG1292 MET1293 GLY1294 TYR1295 GLN1296 CYS1297 THR1298 PHE1299 GLY1300 VAL1301 LEU1302 GLN1303 ALA1304 GLY1305 GLN1306 TYR1307 GLY1308 VAL1309 ALA1310 GLN1311 THR1312 ARG1313 ARG1314 ARG1315 ALA1316 ILE1317 ILE1318 LEU1319 ALA1320 ALA1321 ALA1322 PRO1323 GLY1324 GLU1325 LYS1326 LEU1327 PRO1328 LEU1329 PHE1330 PRO1331 GLU1332 PRO1333 LEU1334 HIS1335 VAL1336 PHE1337 ALA1338 PRO1339 ARG1340 ALA1341 CYS1342 GLN1343 LEU1344 SER1345 VAL1346 VAL1347 VAL1348 ASP1349 ASP1350 LYS1351 LYS1352 PHE1353 VAL1354 SER1355 ASN1356 ILE1357 THR1358 ARG1359 LEU1360 SER1361 SER1362 GLY1363 PRO1364 PHE1365 ARG1366 THR1367 ILE1368 THR1369 VAL1370 ARG1371 ASP1372 THR1373 MET1374 SER1375 ASP1376 LEU1377 PRO1378 GLU1379 ILE1380 GLN1381 ASN1382 GLY1383 ALA1384 SER1385 ASN1386 SER1387 GLU1388 ILE1389 PRO1390 TYR1391 ASN1392 GLY1393 GLU1394 PRO1395 LEU1396 SER1397 TRP1398 PHE1399 GLN1400 ARG1401 GLN1402 LEU1403 ARG1404 GLY1405 SER1406 HIS1407 TYR1408 GLN1409 PRO1410 ILE1411 LEU1412 ARG1413 ASP1414 HIS1415 ILE1416 CYS1417 LYS1418 ASP1419 MET1420 SER1421 PRO1422 LEU1423 VAL1424 ALA1425 ALA1426 ARG1427 MET1428 ARG1429 HIS1430 ILE1431 PRO1432 LEU1433 PHE1434 PRO1435 GLY1436 SER1437 ASP1438 TRP1439 ARG1440 ASP1441 LEU1442 PRO1443 ASN1444 ILE1445 GLN1446 VAL1447 ARG1448 LEU1449 GLY1450 ASP1451 GLY1452 VAL1453 ILE1454 ALA1455 HIS1456 LYS1457 LEU1458 GLN1459 TYR1460 THR1461 PHE1462 HIS1463 ASP1464 VAL1465 LYS1466 ASN1467 GLY1468 TYR1469 SER1470 SER1471 THR1472 GLY1473 ALA1474 LEU1475 ARG1476 GLY1477 VAL1478 CYS1479 SER1480 CYS1481 ALA1482 GLU1483 GLY1484 LYS1485 ALA1486 CYS1487 ASP1488 PRO1489 GLU1490 SER1491 ARG1492 GLN1493 PHE1494 SER1495 THR1496 LEU1497 ILE1498 PRO1499 TRP1500 CYS1501 LEU1502 PRO1503 HIS1504 THR1505 GLY1506 ASN1507 ARG1508 HIS1509 ASN1510 HIS1511 TRP1512 ALA1513 GLY1514 LEU1515 TYR1516 GLY1517 ARG1518 LEU1519 GLU1520 TRP1521 ASP1522 GLY1523 PHE1524 PHE1525 SER1526 THR1527 THR1528 VAL1529 THR1530 ASN1531 PRO1532 GLU1533 PRO1534 MET1535 GLY1536 LYS1537 GLN1538 GLY1539 ARG1540 VAL1541 LEU1542 HIS1543 PRO1544 GLU1545 GLN1546 HIS1547 ARG1548 VAL1549 VAL1550 SER1551 VAL1552 ARG1553 GLU1554 CYS1555 ALA1556 ARG1557 SER1558 GLN1559 GLY1560 PHE1561 PRO1562 ASP1563 SER1564 TYR1565 ARG1566 PHE1567 PHE1568 GLY1569 ASN1570 ILE1571 LEU1572 ASP1573 ARG1574 HIS1575 ARG1576 GLN1577 VAL1578 GLY1579 ASN1580 ALA1581 VAL1582 PRO1583 PRO1584 PRO1585 LEU1586 ALA1587 LYS1588 ALA1589 ILE1590 GLY1591 LEU1592 GLU1593 ILE1594 LYS1595 LEU1596 CYS1597 LEU1598 LEU1599 SER1600 SER1601 ALA1602 ARG1603 GLU1604 SER1605 ALA1606 SER1607 ALA1608 |
| Unit 2 | SAM1 ZN2001 ZN2002 ZN2004 ZN2005 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |