3ASV - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CLOSED FORM OF SERINE DEHYDROGENASE COMPLEXED WITH NADP+
• Keywords: SDR FAMILY, ROSSMANN FOLD, SHORT-CHAIN DEHYDROGENASE/REDUCTA ALLO-THREONINE DEHYDROGENASE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3ASV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	A	248	1891	0
2	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	B	248	1911	0
3	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	C	248	1900	0
4	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	D	248	1907	0
5	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	E	248	1891	0
6	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	F	248	1880	0
7	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	A	2	0	53
8	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	B	2	0	53
9	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	C	2	0	53
10	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	D	2	0	53
11	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	E	2	0	53
12	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	F	2	0	53
13	Water			347	0	347
total				1847	11380	665

Proteins

Unit 1	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248
Unit 2	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248
Unit 3	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248
Unit 4	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248
Unit 5	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248
Unit 6	MET 1 ILE 2 VAL 3 LEU 4 VAL 5 THR 6 GLY 7 ALA 8 THR 9 ALA 10 GLY 11 PHE 12 GLY 13 GLU 14 CYS 15 ILE 16 THR 17 ARG 18 ARG 19 PHE 20 ILE 21 GLN 22 GLN 23 GLY 24 HIS 25 LYS 26 VAL 27 ILE 28 ALA 29 THR 30 GLY 31 ARG 32 ARG 33 GLN 34 GLU 35 ARG 36 LEU 37 GLN 38 GLU 39 LEU 40 LYS 41 ASP 42 GLU 43 LEU 44 GLY 45 ASP 46 ASN 47 LEU 48 TYR 49 ILE 50 ALA 51 GLN 52 LEU 53 ASP 54 VAL 55 ARG 56 ASN 57 ARG 58 ALA 59 ALA 60 ILE 61 GLU 62 GLU 63 MET 64 LEU 65 ALA 66 SER 67 LEU 68 PRO 69 ALA 70 GLU 71 TRP 72 CYS 73 ASN 74 ILE 75 ASP 76 ILE 77 LEU 78 VAL 79 ASN 80 ASN 81 ALA 82 GLY 83 LEU 84 ALA 85 LEU 86 GLY 87 MET 88 GLU 89 PRO 90 ALA 91 HIS 92 LYS 93 ALA 94 SER 95 VAL 96 GLU 97 ASP 98 TRP 99 GLU 100 THR 101 MET 102 ILE 103 ASP 104 THR 105 ASN 106 ASN 107 LYS 108 GLY 109 LEU 110 VAL 111 TYR 112 MET 113 THR 114 ARG 115 ALA 116 VAL 117 LEU 118 PRO 119 GLY 120 MET 121 VAL 122 GLU 123 ARG 124 ASN 125 HIS 126 GLY 127 HIS 128 ILE 129 ILE 130 ASN 131 ILE 132 GLY 133 SER 134 THR 135 ALA 136 GLY 137 SER 138 TRP 139 PRO 140 TYR 141 ALA 142 GLY 143 GLY 144 ASN 145 VAL 146 TYR 147 GLY 148 ALA 149 THR 150 LYS 151 ALA 152 PHE 153 VAL 154 ARG 155 GLN 156 PHE 157 SER 158 LEU 159 ASN 160 LEU 161 ARG 162 THR 163 ASP 164 LEU 165 HIS 166 GLY 167 THR 168 ALA 169 VAL 170 ARG 171 VAL 172 THR 173 ASP 174 ILE 175 GLU 176 PRO 177 GLY 178 LEU 179 VAL 180 GLY 181 GLY 182 THR 183 GLU 184 PHE 185 SER 186 ASN 187 VAL 188 ARG 189 PHE 190 LYS 191 GLY 192 ASP 193 ASP 194 GLY 195 LYS 196 ALA 197 GLU 198 LYS 199 THR 200 TYR 201 GLN 202 ASN 203 THR 204 VAL 205 ALA 206 LEU 207 THR 208 PRO 209 GLU 210 ASP 211 VAL 212 SER 213 GLU 214 ALA 215 VAL 216 TRP 217 TRP 218 VAL 219 SER 220 THR 221 LEU 222 PRO 223 ALA 224 HIS 225 VAL 226 ASN 227 ILE 228 ASN 229 THR 230 LEU 231 GLU 232 MET 233 MET 234 PRO 235 VAL 236 THR 237 GLN 238 SER 239 TYR 240 ALA 241 GLY 242 LEU 243 ASN 244 VAL 245 HIS 246 ARG 247 GLN 248

Ligands

Unit 7	NAP 301 PO4 311
Unit 8	NAP 302 PO4 312
Unit 9	NAP 303 PO4 313
Unit 10	NAP 304 PO4 314
Unit 11	NAP 305 PO4 315
Unit 12	NAP 306 PO4 316