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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF VIRAL POLYMERASE FORM I
Keywords RNA POLYMERASE, REPLICASE, TRANSLATION, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3AGP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ELONGATION FACTOR TS, ELONGATION FACTOR TU, LINKE REPLICASE  A 1202 9274 0
2  Ligand   ELONGATION FACTOR TS, ELONGATION FACTOR TU, LINKE REPLICASE  A 1 0 1
3 Water     36 0 36
total       1239 9274 37

Proteins
Unit 1 ALA2 GLU3 ILE4 THR5 ALA6 SER7 LEU8 VAL9 LYS10 GLU11 LEU12 ARG13 GLU14 ARG15 THR16 GLY17 ALA18 GLY19 MET20 MET21 ASP22 CYS23 LYS24 LYS25 ALA26 LEU27 THR28 GLU29 ALA30 ASN31 GLY32 ASP33 ILE34 GLU35 LEU36 ALA37 ILE38 GLU39 ASN40 MET41 ARG42 LYS43 SER44 GLY45 ALA46 ILE47 LYS48 ALA49 ALA50 LYS51 LYS52 ALA53 GLY54 ASN55 VAL56 ALA57 ALA58 ASP59 GLY60 VAL61 ILE62 LYS63 THR64 LYS65 ILE66 ASP67 GLY68 ASN69 TYR70 GLY71 ILE72 ILE73 LEU74 GLU75 VAL76 ASN77 CYS78 GLN79 THR80 ASP81 PHE82 VAL83 ALA84 LYS85 ASP86 ALA87 GLY88 PHE89 GLN90 ALA91 PHE92 ALA93 ASP94 LYS95 VAL96 LEU97 ASP98 ALA99 ALA100 VAL101 ALA102 GLY103 LYS104 ILE105 THR106 ASP107 VAL108 GLU109 VAL110 LEU111 LYS112 ALA113 GLN114 PHE115 GLU116 GLU117 GLU118 ARG119 VAL120 ALA121 LEU122 VAL123 ALA124 LYS125 ILE126 GLY127 GLU128 ASN129 ILE130 ASN131 ILE132 ARG133 ARG134 VAL135 ALA136 ALA137 LEU138 GLU139 GLY140 ASP141 VAL142 LEU143 GLY144 SER145 TYR146 GLN147 HIS148 GLY149 ALA150 ARG151 ILE152 GLY153 VAL154 LEU155 VAL156 ALA157 ALA158 LYS159 GLY160 ALA161 ASP162 GLU163 GLU164 LEU165 VAL166 LYS167 HIS168 ILE169 ALA170 MET171 HIS172 VAL173 ALA174 ALA175 SER176 LYS177 PRO178 GLU179 PHE180 ILE181 LYS182 PRO183 GLU184 ASP185 VAL186 SER187 ALA188 GLU189 VAL190 VAL191 GLU192 LYS193 GLU194 TYR195 GLN196 VAL197 GLN198 LEU199 ASP200 ILE201 ALA202 MET203 GLN204 SER205 GLY206 LYS207 PRO208 LYS209 GLU210 ILE211 ALA212 GLU213 LYS214 MET215 VAL216 GLU217 GLY218 ARG219 MET220 LYS221 LYS222 PHE223 THR224 GLY225 GLU226 VAL227 SER228 LEU229 THR230 GLY231 GLN232 PRO233 PHE234 VAL235 MET236 GLU237 PRO238 SER239 LYS240 THR241 VAL242 GLY243 GLN244 LEU245 LEU246 LYS247 GLU248 HIS249 ASN250 ALA251 GLU252 VAL253 THR254 GLY255 PHE256 ILE257 ARG258 PHE259 GLU260 VAL261 GLY262 GLU263 GLY264 ILE265 GLU266 LYS267 VAL268 GLU269 THR270 ASP271 PHE272 ALA273 ALA274 GLU275 VAL276 ALA277 ALA278 MET279 SER280 LYS281 GLN282 SER283 HIS284 MET285 SER286 PHE290 GLU291 ARG292 THR293 LYS294 PRO295 HIS296 VAL297 ASN298 VAL299 GLY300 THR301 ILE302 GLY303 HIS304 VAL305 ASP306 HIS307 GLY308 LYS309 THR310 THR311 LEU312 THR313 ALA314 ALA315 ILE316 THR317 THR318 VAL319 LEU320 ALA321 LYS322 THR323 TYR324 GLY325 GLY326 THR349 SER350 HIS351 VAL352 GLU353 TYR354 ASP355 THR356 PRO357 THR358 ARG359 HIS360 TYR361 ALA362 HIS363 VAL364 ASP365 CYS366 PRO367 GLY368 HIS369 ALA370 ASP371 TYR372 VAL373 LYS374 ASN375 MET376 ILE377 THR378 GLY379 ALA380 ALA381 GLN382 MET383 ASP384 GLY385 ALA386 ILE387 LEU388 VAL389 VAL390 ALA391 ALA392 THR393 ASP394 GLY395 PRO396 MET397 PRO398 GLN399 THR400 ARG401 GLU402 HIS403 ILE404 LEU405 LEU406 GLY407 ARG408 GLN409 VAL410 GLY411 VAL412 PRO413 TYR414 ILE415 ILE416 VAL417 PHE418 LEU419 ASN420 LYS421 CYS422 ASP423 MET424 VAL425 ASP426 ASP427 GLU428 GLU429 LEU430 LEU431 GLU432 LEU433 VAL434 GLU435 MET436 GLU437 VAL438 ARG439 GLU440 LEU441 LEU442 SER443 GLN444 TYR445 ASP446 PHE447 PRO448 GLY449 ASP450 ASP451 THR452 PRO453 ILE454 VAL455 ARG456 GLY457 SER458 ALA459 LEU460 LYS461 ALA462 LEU463 GLU464 GLY465 ASP466 ALA467 GLU468 TRP469 GLU470 ALA471 LYS472 ILE473 LEU474 GLU475 LEU476 ALA477 GLY478 PHE479 LEU480 ASP481 SER482 TYR483 ILE484 PRO485 GLU486 PRO487 GLU488 ARG489 ALA490 ILE491 ASP492 LYS493 PRO494 PHE495 LEU496 LEU497 PRO498 ILE499 GLU500 ASP501 VAL502 PHE503 SER504 ILE505 SER506 GLY507 ARG508 GLY509 THR510 VAL511 VAL512 THR513 GLY514 ARG515 VAL516 GLU517 ARG518 GLY519 ILE520 ILE521 LYS522 VAL523 GLY524 GLU525 GLU526 VAL527 GLU528 ILE529 VAL530 GLY531 ILE532 LYS533 GLU534 THR535 GLN536 LYS537 SER538 THR539 CYS540 THR541 GLY542 VAL543 GLU544 MET545 PHE546 ARG547 LYS548 LEU549 LEU550 ASP551 GLU552 GLY553 ARG554 ALA555 GLY556 GLU557 ASN558 VAL559 GLY560 VAL561 LEU562 LEU563 ARG564 GLY565 ILE566 LYS567 ARG568 GLU569 GLU570 ILE571 GLU572 ARG573 GLY574 GLN575 VAL576 LEU577 ALA578 LYS579 PRO580 GLY581 THR582 ILE583 LYS584 PRO585 HIS586 THR587 LYS588 PHE589 GLU590 SER591 GLU592 VAL593 TYR594 ILE595 LEU596 SER597 LYS598 ASP599 GLU600 GLY601 GLY602 ARG603 HIS604 THR605 PRO606 PHE607 PHE608 LYS609 GLY610 TYR611 ARG612 PRO613 GLN614 PHE615 TYR616 PHE617 ARG618 THR619 THR620 ASP621 VAL622 THR623 GLY624 THR625 ILE626 GLU627 LEU628 PRO629 GLU630 GLY631 VAL632 GLU633 MET634 VAL635 MET636 PRO637 GLY638 ASP639 ASN640 ILE641 LYS642 MET643 VAL644 VAL645 THR646 LEU647 ILE648 HIS649 PRO650 ILE651 ALA652 MET653 ASP654 ASP655 GLY656 LEU657 ARG658 PHE659 ALA660 ILE661 ARG662 GLU663 GLY664 GLY665 ARG666 THR667 VAL668 GLY669 ALA670 GLY671 VAL672 VAL673 ALA674 LYS675 VAL676 LEU677 SER678 GLY679 ALA680 SER700 SER701 ARG702 ASN703 SER704 LEU705 SER706 ALA707 GLN708 LEU709 ARG710 ARG711 ALA712 ALA713 ASN714 THR715 ARG716 ILE717 GLU718 VAL719 GLU720 GLY721 ASN722 LEU723 ALA724 LEU725 SER726 ILE727 ALA728 ASN729 ASP730 LEU731 LEU732 LEU733 ALA734 TYR735 GLY736 GLN737 SER738 PRO739 PHE740 ASN741 SER742 GLU743 ALA744 GLU745 CYS746 ILE747 SER748 PHE749 SER750 PRO751 ARG752 PHE753 ASP754 GLY755 THR756 PRO757 ASP758 ASP759 PHE760 ARG761 ILE762 ASN763 TYR764 LEU765 LYS766 ALA767 GLU768 ILE769 MET770 SER771 LYS772 TYR773 ASP774 ASP775 PHE776 SER777 LEU778 GLY779 ILE780 ASP781 THR782 GLU783 ALA784 VAL785 ALA786 TRP787 GLU788 LYS789 PHE790 LEU791 ALA792 ALA793 GLU794 ALA795 GLU796 CYS797 ALA798 LEU799 THR800 ASN801 ALA802 ARG803 LEU804 TYR805 ARG806 PRO807 ASP808 TYR809 SER810 GLU811 ASP812 PHE813 ASN814 PHE815 SER816 LEU817 GLY818 GLU819 SER820 CYS821 ILE822 HIS823 MET824 ALA825 ARG826 ARG827 LYS828 ILE829 ALA830 LYS831 LEU832 ILE833 GLY834 ASP835 VAL836 PRO837 SER838 VAL839 GLU840 GLY841 MET842 LEU843 ARG844 HIS845 CYS846 ARG847 PHE848 SER849 GLY850 GLY851 ALA852 THR853 THR854 THR855 ASN856 ASN857 ARG858 SER859 TYR860 GLY861 HIS862 PRO863 SER864 PHE865 LYS866 PHE867 ALA868 LEU869 PRO870 GLN871 ALA872 CYS873 THR874 PRO875 ARG876 ALA877 LEU878 LYS879 TYR880 VAL881 LEU882 ALA883 LEU884 ARG885 ALA886 SER887 THR888 HIS889 PHE890 ASP891 ILE892 ARG893 ILE894 SER895 ASP896 ILE897 SER898 PRO899 PHE900 ASN901 LYS902 ALA903 VAL904 THR905 VAL906 PRO907 LYS908 ASN909 SER910 LYS911 THR912 ASP913 ARG914 CYS915 ILE916 ALA917 ILE918 GLU919 PRO920 GLY921 TRP922 ASN923 MET924 PHE925 PHE926 GLN927 LEU928 GLY929 ILE930 GLY931 GLY932 ILE933 LEU934 ARG935 ASP936 ARG937 LEU938 ARG939 CYS940 TRP941 GLY942 ILE943 ASP944 LEU945 ASN946 ASP947 GLN948 THR949 ILE950 ASN951 GLN952 ARG953 ARG954 ALA955 HIS956 GLU957 GLY958 SER959 VAL960 THR961 ASN962 ASN963 LEU964 ALA965 THR966 VAL967 ASP968 LEU969 SER970 ALA971 ALA972 SER973 ASP974 SER975 ILE976 SER977 LEU978 ALA979 LEU980 CYS981 GLU982 LEU983 LEU984 LEU985 PRO986 PRO987 GLY988 TRP989 PHE990 GLU991 VAL992 LEU993 MET994 ASP995 LEU996 ARG997 SER998 PRO999 LYS1000 GLY1001 ARG1002 LEU1003 PRO1004 ASP1005 GLY1006 SER1007 VAL1008 VAL1009 THR1010 TYR1011 GLU1012 LYS1013 ILE1014 SER1015 SER1016 MET1017 GLY1018 ASN1019 GLY1020 TYR1021 THR1022 PHE1023 GLU1024 LEU1025 GLU1026 SER1027 LEU1028 ILE1029 PHE1030 ALA1031 SER1032 LEU1033 ALA1034 ARG1035 SER1036 VAL1037 CYS1038 GLU1039 ILE1040 LEU1041 ASP1042 LEU1043 ASP1044 SER1045 SER1046 GLU1047 VAL1048 THR1049 VAL1050 TYR1051 GLY1052 ASP1053 ASP1054 ILE1055 ILE1056 LEU1057 PRO1058 SER1059 CYS1060 ALA1061 VAL1062 PRO1063 ALA1064 LEU1065 ARG1066 GLU1067 VAL1068 PHE1069 LYS1070 TYR1071 VAL1072 GLY1073 PHE1074 THR1075 THR1076 ASN1077 THR1078 LYS1079 LYS1080 THR1081 PHE1082 SER1083 GLU1084 GLY1085 PRO1086 PHE1087 ARG1088 GLU1089 SER1090 CYS1091 GLY1092 LYS1093 HIS1094 TYR1095 TYR1096 SER1097 GLY1098 VAL1099 ASP1100 VAL1101 THR1102 PRO1103 PHE1104 TYR1105 ILE1106 ARG1107 HIS1108 ARG1109 ILE1110 VAL1111 SER1112 PRO1113 ALA1114 ASP1115 LEU1116 ILE1117 LEU1118 VAL1119 LEU1120 ASN1121 ASN1122 LEU1123 TYR1124 ARG1125 TRP1126 ALA1127 THR1128 ILE1129 ASP1130 GLY1131 VAL1132 TRP1133 ASP1134 PRO1135 ARG1136 ALA1137 HIS1138 SER1139 VAL1140 TYR1141 LEU1142 LYS1143 TYR1144 ARG1145 LYS1146 LEU1147 LEU1148 PRO1149 LYS1150 GLN1151 LEU1152 GLN1153 ARG1154 ASN1155 THR1156 ILE1157 PRO1158 ASP1159 GLY1160 TYR1161 GLY1162 ASP1163 GLY1164 ALA1165 LEU1166 VAL1167 GLY1168 SER1169 VAL1170 LEU1171 ILE1172 ASN1173 PRO1174 PHE1175 ALA1176 LYS1177 ASN1178 ARG1179 GLY1180 TRP1181 ILE1182 ARG1183 TYR1184 VAL1185 PRO1186 VAL1187 ILE1188 THR1189 ASP1190 HIS1191 THR1192 ARG1193 ASP1194 ARG1195 GLU1196 ARG1197 ALA1198 GLU1199 LEU1200 GLY1201 SER1202 TYR1203 LEU1204 TYR1205 ASP1206 LEU1207 PHE1208 SER1209 ARG1210 CYS1211 LEU1212 SER1213 GLU1214 SER1215 ASN1216 ALA1234 ILE1235 ASP1236 GLN1237 LEU1238 ILE1239 CYS1240 ARG1241 SER1242 ASN1243 PRO1244 THR1245 LYS1246 ILE1247 SER1248 ARG1249 SER1250 THR1251 GLY1252 LYS1253 PHE1254 ASP1255 ILE1256 GLN1257 TYR1258 ILE1259 ALA1260 CYS1261 SER1262 SER1263 ARG1264

Ligands
Unit 2 CA2001

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany