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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A/EIF2ALPHA-ADIM2P-RRNA COMPLEX FROM PY HORIKOSHII OT3
Keywords PROTEINS-RRNA COMPLEX, 16S RRNA, RNA-BINDING, RNA PROCESSING INITIATION FACTOR, PROTEIN BIOSYNTHESIS, TRANSLATION-RNA BI PROTEIN-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSLATION INITIATION FACTOR 2 SUBUNIT ALPHA  A 168 1383 0
2  Protein   PUTATIVE UNCHARACTERIZED PROTEIN PH1566  B 177 1425 0
3  RNA    C 11 227 0
total       356 3035 0

Proteins
Unit 1 GLU7 TYR8 PRO9 GLU10 GLU11 GLY12 GLU13 PHE14 VAL15 VAL16 ALA17 THR18 VAL19 LYS20 ARG21 ILE22 HIS23 ASN24 TYR25 GLY26 ALA27 PHE28 LEU29 GLU30 LEU31 ASP32 GLU33 TYR34 PRO35 GLY36 LYS37 GLU38 ALA39 PHE40 MET41 HIS42 ILE43 SER44 GLU45 VAL46 ALA47 SER48 THR49 TRP50 VAL51 ARG52 ASN53 ILE54 ARG55 ASP56 TYR57 LEU58 LYS59 GLU60 GLY61 GLN62 LYS63 VAL64 VAL65 ALA66 LYS67 VAL68 ILE69 ARG70 VAL71 ASP72 PRO73 ARG74 LYS75 GLY76 HIS77 ILE78 ASP79 LEU80 SER81 LEU82 ARG83 ARG84 VAL85 THR86 GLN87 GLN88 GLN89 ARG90 LYS91 ALA92 LYS93 LEU94 GLN95 GLU96 PHE97 LYS98 ARG99 ALA100 GLN101 LYS102 ALA103 GLU104 ASN105 LEU106 LEU107 ARG108 LEU109 ALA110 ALA111 GLU112 LYS113 LEU114 GLY115 LYS116 ASP117 PHE118 GLU119 ALA120 ALA121 TRP122 ARG123 GLU124 VAL125 TRP126 VAL127 PRO128 LEU129 GLU130 GLU131 GLU132 TRP133 GLY134 GLU135 VAL136 TYR137 ALA138 ALA139 PHE140 GLU141 ASP142 ALA143 ALA144 LYS145 ASP146 GLY147 ILE148 GLU149 VAL150 LEU151 LYS152 GLY153 HIS154 VAL155 PRO156 ASP157 GLU158 TRP159 LEU160 PRO161 VAL162 LEU163 LYS164 GLU165 ILE166 VAL167 GLU168 ASN169 TYR170 VAL171 GLU172 VAL173 PRO174
Unit 2 ASP26 GLU27 TRP28 GLU29 GLU30 PHE31 PHE32 LYS33 GLN34 GLU35 GLU36 TYR37 VAL38 LYS39 ILE40 PRO41 LYS42 ASP43 ARG44 ILE45 ALA46 VAL47 LEU48 ILE49 GLY50 LYS51 LYS52 GLY53 GLN54 THR55 LYS56 LYS57 GLU58 ILE59 GLU60 LYS61 ARG62 THR63 LYS64 THR65 LYS66 ILE67 THR68 ILE69 ASP70 SER71 GLU72 THR73 GLY74 GLU75 VAL76 TRP77 ILE78 THR79 SER80 THR81 LYS82 GLU83 THR84 GLU85 ASP86 PRO87 LEU88 ALA89 VAL90 TRP91 LYS92 ALA93 ARG94 ASP95 ILE96 VAL97 LEU98 ALA99 ILE100 GLY101 ARG102 GLY103 PHE104 SER105 PRO106 GLU107 ARG108 ALA109 PHE110 ARG111 LEU112 LEU113 ASN114 GLU115 GLY116 GLU117 TYR118 LEU119 GLU120 ILE121 ILE122 ASN123 LEU124 THR125 ASP126 ILE127 ILE128 ALA135 LEU136 PRO137 ARG138 VAL139 ARG140 GLY141 ARG142 ILE143 ILE144 GLY145 ARG146 LYS147 GLY148 ARG149 THR150 ARG151 GLN152 ILE153 ILE154 GLU155 GLU156 MET157 SER158 GLY159 ALA160 SER161 VAL162 SER163 VAL164 TYR165 GLY166 LYS167 THR168 VAL169 ALA170 ILE171 ILE172 GLY173 ASN174 PRO175 ILE176 GLN177 ILE178 GLU179 ILE180 ALA181 LYS182 THR183 ALA184 ILE185 GLU186 LYS187 LEU188 ALA189 ARG190 GLY191 SER192 PRO193 HIS194 GLY195 SER196 VAL197 TYR198 ARG199 TYR200 LEU201 GLU202 ARG203 ARG204 LYS205 LYS206 ASP207 LEU208

Nucleic acids
Unit 3 G1 G2 A3 U4 C5 A6 C7 C8 U9 C10 C11

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany