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Title | CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II 2-IODO-N-METHYL-BENZAMIDE | |
Keywords | RESPIRATORY COMPLEX II, INHIBITORS, ELECTRON TRANSPORT, IRON SULFUR, METAL-BINDING, MITOCHONDRION, MITOCHONDRION INNER M OXIDOREDUCTASE, TRANSIT PEPTIDE, TRANSPORT, TRICARBOXYLIC A CYCLE, HEME, TRANSMEMBRANE, FAD-BINDING PROTEIN, OXIDOREDUC OXIDOREDUCTASE INHIBITOR COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3AE4 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN MITOCHONDRIAL | A | 613 | 4729 | 0 |
2 | Protein | SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR MITOCHONDRIAL | B | 239 | 1922 | 0 |
3 | Protein | SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL | C | 138 | 1064 | 0 |
4 | Protein | SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SUBUNIT, MITOCHONDRIAL | D | 102 | 765 | 0 |
5 | Ligand | SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN MITOCHONDRIAL | A | 2 | 0 | 60 |
6 | Ligand | SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR MITOCHONDRIAL | B | 3 | 0 | 19 |
7 | Ligand | SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT, MITOCHONDRIAL | C | 1 | 0 | 43 |
8 | Ligand | SUCCINATE DEHYDROGENASE [UBIQUINONE] CYTOCHROME B SUBUNIT, MITOCHONDRIAL | D | 2 | 0 | 55 |
total | 1100 | 8480 | 177 |
Unit 1 | SER10 THR11 GLN12 TYR13 PRO14 VAL15 VAL16 ASP17 HIS18 GLU19 PHE20 ASP21 ALA22 VAL23 VAL24 VAL25 GLY26 ALA27 GLY28 GLY29 ALA30 GLY31 LEU32 ARG33 ALA34 ALA35 PHE36 GLY37 LEU38 SER39 GLU40 ALA41 GLY42 PHE43 ASN44 THR45 ALA46 CYS47 VAL48 THR49 LYS50 LEU51 PHE52 PRO53 THR54 ARG55 SER56 HIS57 THR58 VAL59 ALA60 ALA61 GLN62 GLY63 GLY64 ILE65 ASN66 ALA67 ALA68 LEU69 GLY70 ASN71 MET72 GLU73 GLU74 ASP75 ASN76 TRP77 ARG78 TRP79 HIS80 PHE81 TYR82 ASP83 THR84 VAL85 LYS86 GLY87 SER88 ASP89 TRP90 LEU91 GLY92 ASP93 GLN94 ASP95 ALA96 ILE97 HIS98 TYR99 MET100 THR101 GLU102 GLN103 ALA104 PRO105 ALA106 SER107 VAL108 VAL109 GLU110 LEU111 GLU112 ASN113 TYR114 GLY115 MET116 PRO117 PHE118 SER119 ARG120 THR121 GLU122 ASP123 GLY124 LYS125 ILE126 TYR127 GLN128 ARG129 ALA130 PHE131 GLY132 GLY133 GLN134 SER135 LEU136 LYS137 PHE138 GLY139 LYS140 GLY141 GLY142 GLN143 ALA144 HIS145 ARG146 CYS147 CYS148 CYS149 VAL150 ALA151 ASP152 ARG153 THR154 GLY155 HIS156 SER157 LEU158 LEU159 HIS160 THR161 LEU162 TYR163 GLY164 ARG165 SER166 LEU167 ARG168 TYR169 ASP170 THR171 SER172 TYR173 PHE174 VAL175 GLU176 TYR177 PHE178 ALA179 LEU180 ASP181 LEU182 LEU183 MET184 GLU185 ASN186 GLY187 GLU188 CYS189 ARG190 GLY191 VAL192 ILE193 ALA194 LEU195 CYS196 ILE197 GLU198 ASP199 GLY200 SER201 ILE202 HIS203 ARG204 ILE205 ARG206 ALA207 ARG208 ASN209 THR210 VAL211 VAL212 ALA213 THR214 GLY215 GLY216 TYR217 GLY218 ARG219 THR220 TYR221 PHE222 SER223 CYS224 THR225 SER226 ALA227 HIS228 THR229 SER230 THR231 GLY232 ASP233 GLY234 THR235 ALA236 MET237 VAL238 THR239 ARG240 ALA241 GLY242 LEU243 PRO244 CYS245 GLN246 ASP247 LEU248 GLU249 PHE250 VAL251 GLN252 PHE253 HIS254 PRO255 THR256 GLY257 ILE258 TYR259 GLY260 ALA261 GLY262 CYS263 LEU264 ILE265 THR266 GLU267 GLY268 CYS269 ARG270 GLY271 GLU272 GLY273 GLY274 ILE275 LEU276 ILE277 ASN278 SER279 GLN280 GLY281 GLU282 ARG283 PHE284 MET285 GLU286 ARG287 TYR288 ALA289 PRO290 VAL291 ALA292 LYS293 ASP294 LEU295 ALA296 SER297 ARG298 ASP299 VAL300 VAL301 SER302 ARG303 SER304 MET305 THR306 LEU307 GLU308 ILE309 ARG310 GLU311 GLY312 ARG313 GLY314 CYS315 GLY316 PRO317 GLU318 LYS319 ASP320 HIS321 VAL322 TYR323 LEU324 GLN325 LEU326 HIS327 HIS328 LEU329 PRO330 PRO331 GLU332 GLN333 LEU334 ALA335 VAL336 ARG337 LEU338 PRO339 GLY340 ILE341 SER342 GLU343 THR344 ALA345 MET346 ILE347 PHE348 ALA349 GLY350 VAL351 ASP352 VAL353 THR354 LYS355 GLU356 PRO357 ILE358 PRO359 VAL360 LEU361 PRO362 THR363 VAL364 HIS365 TYR366 ASN367 MET368 GLY369 GLY370 ILE371 PRO372 THR373 ASN374 TYR375 LYS376 GLY377 GLN378 VAL379 LEU380 ARG381 HIS382 VAL383 ASN384 GLY385 GLN386 ASP387 GLN388 VAL389 VAL390 PRO391 GLY392 LEU393 TYR394 ALA395 CYS396 GLY397 GLU398 ALA399 ALA400 CYS401 ALA402 SER403 VAL404 HIS405 GLY406 ALA407 ASN408 ARG409 LEU410 GLY411 ALA412 ASN413 SER414 LEU415 LEU416 ASP417 LEU418 VAL419 VAL420 PHE421 GLY422 ARG423 ALA424 CYS425 ALA426 LEU427 SER428 ILE429 ALA430 GLU431 SER432 CYS433 ARG434 PRO435 GLY436 ASP437 LYS438 VAL439 PRO440 SER441 ILE442 LYS443 PRO444 ASN445 ALA446 GLY447 GLU448 GLU449 SER450 VAL451 MET452 ASN453 LEU454 ASP455 LYS456 LEU457 ARG458 PHE459 ALA460 ASN461 GLY462 THR463 ILE464 ARG465 THR466 SER467 GLU468 LEU469 ARG470 LEU471 SER472 MET473 GLN474 LYS475 SER476 MET477 GLN478 SER479 HIS480 ALA481 ALA482 VAL483 PHE484 ARG485 VAL486 GLY487 SER488 VAL489 LEU490 GLN491 GLU492 GLY493 CYS494 GLU495 LYS496 ILE497 LEU498 ARG499 LEU500 TYR501 GLY502 ASP503 LEU504 GLN505 HIS506 LEU507 LYS508 THR509 PHE510 ASP511 ARG512 GLY513 MET514 VAL515 TRP516 ASN517 THR518 ASP519 LEU520 VAL521 GLU522 THR523 LEU524 GLU525 LEU526 GLN527 ASN528 LEU529 MET530 LEU531 CYS532 ALA533 LEU534 GLN535 THR536 ILE537 TYR538 GLY539 ALA540 GLU541 ALA542 ARG543 LYS544 GLU545 SER546 ARG547 GLY548 ALA549 HIS550 ALA551 ARG552 GLU553 ASP554 PHE555 LYS556 GLU557 ARG558 VAL559 ASP560 GLU561 TYR562 ASP563 TYR564 SER565 LYS566 PRO567 ILE568 GLN569 GLY570 GLN571 GLN572 LYS573 LYS574 PRO575 PHE576 GLN577 GLU578 HIS579 TRP580 ARG581 LYS582 HIS583 THR584 LEU585 SER586 TYR587 VAL588 ASP589 VAL590 LYS591 THR592 GLY593 LYS594 VAL595 SER596 LEU597 GLU598 TYR599 ARG600 PRO601 VAL602 ILE603 ASP604 LYS605 THR606 LEU607 ASN608 GLU609 ALA610 ASP611 CYS612 ALA613 THR614 VAL615 PRO616 PRO617 ALA618 ILE619 ARG620 SER621 TYR622 |
Unit 2 | PRO9 ARG10 ILE11 LYS12 LYS13 PHE14 ALA15 ILE16 TYR17 ARG18 TRP19 ASP20 PRO21 ASP22 LYS23 THR24 GLY25 ASP26 LYS27 PRO28 HIS29 MET30 GLN31 THR32 TYR33 GLU34 ILE35 ASP36 LEU37 ASN38 ASN39 CYS40 GLY41 PRO42 MET43 VAL44 LEU45 ASP46 ALA47 LEU48 ILE49 LYS50 ILE51 LYS52 ASN53 GLU54 ILE55 ASP56 SER57 THR58 LEU59 THR60 PHE61 ARG62 ARG63 SER64 CYS65 ARG66 GLU67 GLY68 ILE69 CYS70 GLY71 SER72 CYS73 ALA74 MET75 ASN76 ILE77 ASN78 GLY79 GLY80 ASN81 THR82 LEU83 ALA84 CYS85 THR86 ARG87 ARG88 ILE89 ASP90 THR91 ASN92 LEU93 ASP94 LYS95 VAL96 SER97 LYS98 ILE99 TYR100 PRO101 LEU102 PRO103 HIS104 MET105 TYR106 VAL107 ILE108 LYS109 ASP110 LEU111 VAL112 PRO113 ASP114 LEU115 SER116 ASN117 PHE118 TYR119 ALA120 GLN121 TYR122 LYS123 SER124 ILE125 GLU126 PRO127 TYR128 LEU129 LYS130 LYS131 LYS132 ASP133 GLU134 SER135 GLN136 GLU137 GLY138 LYS139 GLN140 GLN141 TYR142 LEU143 GLN144 SER145 ILE146 GLU147 GLU148 ARG149 GLU150 LYS151 LEU152 ASP153 GLY154 LEU155 TYR156 GLU157 CYS158 ILE159 LEU160 CYS161 ALA162 CYS163 CYS164 SER165 THR166 SER167 CYS168 PRO169 SER170 TYR171 TRP172 TRP173 ASN174 GLY175 ASP176 LYS177 TYR178 LEU179 GLY180 PRO181 ALA182 VAL183 LEU184 MET185 GLN186 ALA187 TYR188 ARG189 TRP190 MET191 ILE192 ASP193 SER194 ARG195 ASP196 ASP197 PHE198 THR199 GLU200 GLU201 ARG202 LEU203 ALA204 LYS205 LEU206 GLN207 ASP208 PRO209 PHE210 SER211 LEU212 TYR213 ARG214 CYS215 HIS216 THR217 ILE218 MET219 ASN220 CYS221 THR222 GLY223 THR224 CYS225 PRO226 LYS227 GLY228 LEU229 ASN230 PRO231 GLY232 LYS233 ALA234 ILE235 ALA236 GLU237 ILE238 LYS239 LYS240 MET241 MET242 ALA243 THR244 TYR245 LYS246 GLU247 |
Unit 3 | THR6 THR7 ALA8 LYS9 GLU10 GLU11 MET12 GLU13 ARG14 PHE15 TRP16 ASN17 LYS18 ASN19 LEU20 GLY21 SER22 ASN23 ARG24 PRO25 LEU26 SER27 PRO28 HIS29 ILE30 THR31 ILE32 TYR33 ARG34 TRP35 SER36 LEU37 PRO38 MET39 ALA40 MET41 SER42 ILE43 CYS44 HIS45 ARG46 GLY47 THR48 GLY49 ILE50 ALA51 LEU52 SER53 ALA54 GLY55 VAL56 SER57 LEU58 PHE59 GLY60 LEU61 SER62 ALA63 LEU64 LEU65 LEU66 PRO67 GLY68 ASN69 PHE70 GLU71 SER72 HIS73 LEU74 GLU75 LEU76 VAL77 LYS78 SER79 LEU80 CYS81 LEU82 GLY83 PRO84 THR85 LEU86 ILE87 TYR88 THR89 ALA90 LYS91 PHE92 GLY93 ILE94 VAL95 PHE96 PRO97 LEU98 MET99 TYR100 HIS101 THR102 TRP103 ASN104 GLY105 ILE106 ARG107 HIS108 LEU109 ILE110 TRP111 ASP112 LEU113 GLY114 LYS115 GLY116 LEU117 THR118 ILE119 PRO120 GLN121 LEU122 THR123 GLN124 SER125 GLY126 VAL127 VAL128 VAL129 LEU130 ILE131 LEU132 THR133 VAL134 LEU135 SER136 SER137 VAL138 GLY139 LEU140 ALA141 ALA142 MET143 |
Unit 4 | SER35 SER36 LYS37 ALA38 ALA39 SER40 LEU41 HIS42 TRP43 THR44 GLY45 GLU46 ARG47 VAL48 VAL49 SER50 VAL51 LEU52 LEU53 LEU54 GLY55 LEU56 LEU57 PRO58 ALA59 ALA60 TYR61 LEU62 ASN63 PRO64 CYS65 SER66 ALA67 MET68 ASP69 TYR70 SER71 LEU72 ALA73 ALA74 ALA75 LEU76 THR77 LEU78 HIS79 GLY80 HIS81 TRP82 GLY83 ILE84 GLY85 GLN86 VAL87 VAL88 THR89 ASP90 TYR91 VAL92 ARG93 GLY94 ASP95 ALA96 LEU97 GLN98 LYS99 ALA100 ALA101 LYS102 ALA103 GLY104 LEU105 LEU106 ALA107 LEU108 SER109 ALA110 PHE111 THR112 PHE113 ALA114 GLY115 LEU116 CYS117 TYR118 PHE119 ASN120 TYR121 HIS122 ASP123 VAL124 GLY125 ILE126 CYS127 LYS128 ALA129 VAL130 ALA131 MET132 LEU133 TRP134 LYS135 LEU136 |
Unit 5 | FAD700 MLI701 |
Unit 6 | FES302 SF4303 F3S304 |
Unit 7 | HEM1305 |
Unit 8 | N1M1201 EPH1306 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |