3ADB - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF O-PHOSPHOSERYL-TRNA KINASE COMPLEXED WI SELENOCYSTEINE TRNA AND AMPPNP (CRYSTAL TYPE 1)
• Keywords: PROTEIN-RNA COMPLEX, TRNA, ATP-BINDING, KINASE, NUCLEOTIDE-B TRANSFERASE, TRANSFERASE-RNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3ADB	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	L-SERYL-TRNA(SEC) KINASE	A	250	2067	32
2	Protein	L-SERYL-TRNA(SEC) KINASE	B	247	2035	40
3	RNA		C	92	1968	0
4	RNA		D	92	1968	0
5	Ligand	L-SERYL-TRNA(SEC) KINASE	A	1	0	5
6	Ligand	L-SERYL-TRNA(SEC) KINASE	B	2	0	32
7	Water			159	0	159
total				843	8038	268

Proteins

Unit 1

HIS -1 HIS 0 MSE 1 LEU 2 ILE 3 ILE 4 LEU 5 THR 6 GLY 7 LEU 8 PRO 9 GLY 10 VAL 11 GLY 12 LYS 13 SER 14 THR 15 PHE 16 SER 17 LYS 18 ASN 19 LEU 20 ALA 21 LYS 22 ILE 23 LEU 24 SER 25 LYS 26 ASN 27 ASN 28 ILE 29 ASP 30 VAL 31 ILE 32 VAL 33 LEU 34 GLY 35 SER 36 ASP 37 LEU 38 ILE 39 ARG 40 GLU 41 SER 42 PHE 43 PRO 44 VAL 45 TRP 46 LYS 47 GLU 48 LYS 49 TYR 50 GLU 51 GLU 52 PHE 53 ILE 54 LYS 55 LYS 56 SER 57 THR 58 TYR 59 ARG 60 LEU 61 ILE 62 ASP 63 SER 64 ALA 65 LEU 66 LYS 67 ASN 68 TYR 69 TRP 70 VAL 71 ILE 72 VAL 73 ASP 74 ASP 75 THR 76 ASN 77 TYR 78 TYR 79 ASN 80 SER 81 MSE 82 ARG 83 ARG 84 ASP 85 LEU 86 ILE 87 ASN 88 ILE 89 ALA 90 LYS 91 LYS 92 TYR 93 ASN 94 LYS 95 ASN 96 TYR 97 ALA 98 ILE 99 ILE 100 TYR 101 LEU 102 LYS 103 ALA 104 SER 105 LEU 106 ASP 107 VAL 108 LEU 109 ILE 110 ARG 111 ARG 112 ASN 113 ILE 114 GLU 115 ARG 116 GLY 117 GLU 118 LYS 119 ILE 120 PRO 121 ASN 122 GLU 123 VAL 124 ILE 125 LYS 126 LYS 127 MSE 128 TYR 129 GLU 130 LYS 131 PHE 132 ASP 133 GLU 134 PRO 135 GLY 136 LYS 137 LYS 138 TYR 139 LYS 140 TRP 141 ASP 142 GLU 143 PRO 144 PHE 145 LEU 146 ILE 147 ILE 148 ASP 149 THR 150 THR 151 LYS 152 ASP 153 ILE 154 ASP 155 PHE 156 ASN 157 GLU 158 ILE 159 ALA 160 LYS 161 LYS 162 LEU 163 ILE 164 GLU 165 LYS 166 SER 167 LYS 168 GLU 169 ILE 170 PRO 171 LYS 172 PHE 173 TYR 174 VAL 175 LEU 176 GLU 177 GLU 178 ASN 179 LYS 180 ASN 181 LYS 182 ASN 183 ASN 184 ASN 185 ILE 186 SER 187 ASP 188 LYS 189 ILE 190 ASP 191 LYS 192 GLU 193 THR 194 ARG 195 LYS 196 ILE 197 VAL 198 SER 199 GLU 200 TYR 201 ILE 202 LYS 203 SER 204 LYS 205 LYS 206 LEU 207 ASP 208 LYS 209 ASP 210 LYS 211 ILE 212 LYS 213 GLU 214 VAL 215 VAL 216 GLU 217 LEU 218 ARG 219 LYS 220 GLU 221 PHE 222 LEU 223 LYS 224 LYS 225 ILE 226 LYS 227 LYS 228 MSE 229 GLU 230 GLU 231 VAL 232 ASP 233 ALA 234 ASP 235 ARG 236 VAL 237 LEU 238 LYS 239 GLU 240 PHE 241 LYS 242 ASP 243 LEU 244 LEU 245 ASN 246 SER 247 TYR 248

Unit 2

MSE -10 ASN -9 HIS -4 HIS -3 HIS -2 HIS -1 HIS 0 MSE 1 LEU 2 ILE 3 ILE 4 LEU 5 THR 6 GLY 7 LEU 8 PRO 9 GLY 10 VAL 11 GLY 12 LYS 13 SER 14 THR 15 PHE 16 SER 17 LYS 18 ASN 19 LEU 20 ALA 21 LYS 22 ILE 23 LEU 24 SER 25 LYS 26 ASN 27 ASN 28 ILE 29 ASP 30 VAL 31 ILE 32 VAL 33 LEU 34 GLY 35 SER 36 ASP 37 LEU 38 ILE 39 ARG 40 GLU 41 SER 42 PHE 43 PRO 44 VAL 45 TRP 46 LYS 47 GLU 48 LYS 49 TYR 50 GLU 51 GLU 52 PHE 53 ILE 54 LYS 55 LYS 56 SER 57 THR 58 TYR 59 ARG 60 LEU 61 ILE 62 ASP 63 SER 64 ALA 65 LEU 66 LYS 67 ASN 68 TYR 69 TRP 70 VAL 71 ILE 72 VAL 73 ASP 74 ASP 75 THR 76 ASN 77 TYR 78 TYR 79 ASN 80 SER 81 MSE 82 ARG 83 ARG 84 ASP 85 LEU 86 ILE 87 ASN 88 ILE 89 ALA 90 LYS 91 LYS 92 TYR 93 ASN 94 LYS 95 ASN 96 TYR 97 ALA 98 ILE 99 ILE 100 TYR 101 LEU 102 LYS 103 ALA 104 SER 105 LEU 106 ASP 107 VAL 108 LEU 109 ILE 110 ARG 111 ARG 112 ASN 113 ILE 114 GLU 115 ARG 116 GLY 117 GLU 118 LYS 119 ILE 120 PRO 121 ASN 122 GLU 123 VAL 124 ILE 125 LYS 126 LYS 127 MSE 128 TYR 129 GLU 130 LYS 131 PHE 132 ASP 133 GLU 134 PRO 135 GLY 136 LYS 137 LYS 138 TYR 139 LYS 140 TRP 141 ASP 142 GLU 143 PRO 144 PHE 145 LEU 146 ILE 147 ILE 148 ASP 149 THR 150 THR 151 LYS 152 ASP 153 ILE 154 ASP 155 PHE 156 ASN 157 GLU 158 ILE 159 ALA 160 LYS 161 LYS 162 LEU 163 ILE 164 GLU 165 LYS 166 SER 167 LYS 168 GLU 169 ILE 170 PRO 171 LYS 172 PHE 173 LYS 182 ASN 183 ASN 184 ASN 185 ILE 186 SER 187 ASP 188 LYS 189 ILE 190 ASP 191 LYS 192 GLU 193 THR 194 ARG 195 LYS 196 ILE 197 VAL 198 SER 199 GLU 200 TYR 201 ILE 202 LYS 203 SER 204 LYS 205 LYS 206 LEU 207 ASP 208 LYS 209 ASP 210 LYS 211 ILE 212 LYS 213 GLU 214 VAL 215 VAL 216 GLU 217 LEU 218 ARG 219 LYS 220 GLU 221 PHE 222 LEU 223 LYS 224 LYS 225 ILE 226 LYS 227 LYS 228 MSE 229 GLU 230 GLU 231 VAL 232 ASP 233 ALA 234 ASP 235 ARG 236 VAL 237 LEU 238 LYS 239 GLU 240 PHE 241 LYS 242 ASP 243 LEU 244 LEU 245 ASN 246 SER 247 TYR 248

Nucleic acids

Unit 3

G 1 G 2 C 3 C 4 G 5 C 5A C 5B G 6 C 7 C 8 A 9 C 10 C 11 G 12 G 13 G 14 G 15 U 16 G 18 G 19 U 20 C 20A C 21 C 22 C 23 G 24 G 25 G 26 C 27 C 28 G 29 G 30 A 31 C 32 U 33 U 34 C 35 A 36 G 37 A 38 U 39 C 40 C 41 G 42 G 43 C 44 G 45 C 46 G 47 C 47A C 47B C 47C C 47D G 47E A 47F G 47G U 47H G 47I G 47J G 47K G 47L C 47M G 47N C 48 G 50 G 51 G 52 G 53 U 54 U 55 C 56 A 57 A 58 U 59 U 60 C 61 C 62 C 63 C 64 G 66 C 67 G 67A G 67B C 68 G 69 G 70 C 71 C 72 G 73 C 74 C 75 A 76

Unit 4

G 1 G 2 C 3 C 4 G 5 C 5A C 5B G 6 C 7 C 8 A 9 C 10 C 11 G 12 G 13 G 14 G 15 U 16 G 18 G 19 U 20 C 20A C 21 C 22 C 23 G 24 G 25 G 26 C 27 C 28 G 29 G 30 A 31 C 32 U 33 U 34 C 35 A 36 G 37 A 38 U 39 C 40 C 41 G 42 G 43 C 44 G 45 C 46 G 47 C 47A C 47B C 47C C 47D G 47E A 47F G 47G U 47H G 47I G 47J G 47K G 47L C 47M G 47N C 48 G 50 G 51 G 52 G 53 U 54 U 55 C 56 A 57 A 58 U 59 U 60 C 61 C 62 C 63 C 64 G 66 C 67 G 67A G 67B C 68 G 69 G 70 C 71 C 72 G 73 C 74 C 75 A 76

Ligands

Unit 5	PO4 2001
Unit 6	ANP 2002 MG 2004