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Sequence, Chains, Asymmetric and Biological Units

Title HETEROTETRAMERIC SARCOSINE OXIDASE FROM CORYNEBACTERIUM SP. COMPLEX WITH PYRROLE 2-CARBOXYLATE
Keywords SARCOSINE OXIDASE, LIGAND COMPLEX, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3AD8     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SARCOSINE OXIDASE ALPHA SUBUNIT  A 963 7229 0
2  Protein   SARCOSINE OXIDASE BETA SUBUNIT  B 404 3108 0
3  Protein   SARCOSINE OXIDASE GAMMA SUBUNIT  C 195 1433 0
4  Protein   SARCOSINE OXIDASE DELTA SUBUNIT  D 91 749 0
5  Ligand   SARCOSINE OXIDASE ALPHA SUBUNIT  A 8 0 79
6  Ligand   SARCOSINE OXIDASE BETA SUBUNIT  B 6 0 107
7  Ligand   SARCOSINE OXIDASE GAMMA SUBUNIT  C 1 0 5
8  Ligand   SARCOSINE OXIDASE DELTA SUBUNIT  D 2 0 6
9 Water     1020 0 1020
total       2690 12519 1217

Proteins
Unit 1 SER1 LYS2 PRO3 GLN4 ARG5 LEU6 SER7 ALA8 ALA9 GLN10 THR11 ALA12 GLY13 ALA14 ARG15 ILE16 ASN17 ARG18 ASP19 GLU20 ALA21 LEU22 THR23 LEU24 THR25 VAL26 ASP27 GLY28 GLN29 GLN30 LEU31 SER32 ALA33 PHE34 ARG35 GLY36 ASP37 THR38 VAL39 ALA40 SER41 ALA42 MET43 LEU44 ALA45 ASN46 GLY47 LEU48 ARG49 SER50 CYS51 GLY52 ASN53 SER54 MET55 TYR56 LEU57 ASP58 ARG59 PRO60 ARG61 GLY62 ILE63 PHE64 SER65 ALA66 GLY67 VAL68 GLU69 GLU70 PRO71 ASN72 ALA73 LEU74 ILE75 THR76 VAL77 GLY78 ALA79 ARG80 HIS81 GLN82 ALA83 ASP84 ILE85 ASN86 GLU87 SER88 MET89 LEU90 PRO91 ALA92 THR93 THR94 VAL95 SER96 VAL97 THR98 ASP99 GLY100 LEU101 ASN102 ALA103 THR104 LEU105 LEU106 SER107 GLY108 LEU109 GLY110 VAL111 LEU112 ASP113 PRO114 SER115 GLU116 ASP117 PRO118 ALA119 TYR120 TYR121 ASP122 HIS123 VAL124 HIS125 VAL126 HIS127 THR128 ASP129 VAL130 LEU131 VAL132 VAL133 GLY134 ALA135 GLY136 PRO137 ALA138 GLY139 LEU140 ALA141 ALA142 ALA143 ARG144 GLU145 ALA146 SER147 ARG148 SER149 GLY150 ALA151 ARG152 VAL153 MET154 LEU155 LEU156 ASP157 GLU158 ARG159 PRO160 GLU161 ALA162 GLY163 GLY164 THR165 LEU166 ARG167 GLU168 ALA169 SER170 GLY171 GLU172 GLN173 ILE174 ASP175 GLY176 ILE177 ASP178 ALA179 ALA180 GLN181 TRP182 ILE183 ASP184 ALA185 VAL186 THR187 GLU188 GLU189 LEU190 ALA191 ALA192 ALA193 GLU194 GLU195 THR196 THR197 HIS198 LEU199 GLN200 ARG201 THR202 THR203 VAL204 PHE205 GLY206 SER207 TYR208 ASP209 ALA210 ASN211 TYR212 ILE213 LEU214 ALA215 ALA216 GLN217 ARG218 ARG219 THR220 VAL221 HIS222 LEU223 ASP224 GLY225 PRO226 SER227 GLY228 GLN229 GLY230 VAL231 SER232 ARG233 GLU234 ARG235 ILE236 TRP237 HIS238 ILE239 ARG240 ALA241 LYS242 GLN243 VAL244 VAL245 LEU246 ALA247 THR248 ALA249 ALA250 HIS251 GLU252 ARG253 PRO254 ILE255 VAL256 PHE257 GLU258 ASN259 ASN260 ASP261 ARG262 PRO263 GLY264 ILE265 MET266 LEU267 ALA268 GLY269 SER270 VAL271 ARG272 SER273 TYR274 LEU275 ASN276 ARG277 PHE278 GLY279 VAL280 ARG281 ALA282 GLY283 SER284 LYS285 ILE286 ALA287 VAL288 ALA289 THR290 THR291 ASN292 ASP293 SER294 VAL295 TYR296 PRO297 LEU298 VAL299 SER300 GLU301 LEU302 ALA303 ALA304 SER305 GLY306 GLY307 VAL308 VAL309 ALA310 VAL311 ILE312 ASP313 ALA314 ARG315 GLN316 ASN317 ILE318 SER319 ALA320 ALA321 ALA322 ALA323 GLN324 ALA325 VAL326 THR327 ASP328 GLY329 VAL330 THR331 VAL332 LEU333 THR334 GLY335 SER336 VAL337 VAL338 ALA339 ASN340 THR341 GLU342 ALA343 ASP344 ALA345 SER346 GLY347 GLU348 LEU349 SER350 ALA351 VAL352 LEU353 VAL354 ALA355 THR356 LEU357 ASP358 GLU359 GLN360 ARG361 ASN362 LEU363 GLY364 GLU365 ALA366 GLN367 ARG368 PHE369 GLU370 ALA371 ASP372 VAL373 LEU374 ALA375 VAL376 SER377 GLY378 GLY379 PHE380 ASN381 PRO382 VAL383 VAL384 HIS385 LEU386 HIS387 SER388 GLN389 ARG390 GLN391 GLY392 LYS393 LEU394 ASN395 TRP396 ASP397 THR398 SER399 ILE400 HIS401 ALA402 PHE403 VAL404 PRO405 ALA406 ASP407 ALA408 VAL409 ALA410 ASN411 GLN412 HIS413 LEU414 ALA415 GLY416 ALA417 LEU418 THR419 GLY420 LEU421 LEU422 ASP423 THR424 ALA425 SER426 ALA427 LEU428 SER429 THR430 GLY431 ALA432 ALA433 THR434 GLY435 ALA436 ALA437 ALA438 ALA439 SER440 ALA441 ALA442 GLY443 PHE444 GLU445 LYS446 ILE447 ALA448 GLU449 VAL450 PRO451 GLN452 ALA453 LEU454 ALA455 VAL456 PRO457 ALA458 GLY459 GLU460 THR461 ARG462 PRO463 VAL464 TRP465 LEU466 VAL467 PRO468 SER469 LEU470 SER471 GLY472 ASP473 ASP474 ALA475 VAL476 HIS477 TYR478 LYS479 PHE480 HIS481 PHE482 VAL483 ASP484 LEU485 GLN486 ARG487 ASP488 GLN489 THR490 VAL491 ALA492 ASP493 VAL494 LEU495 ARG496 ALA497 THR498 GLY499 ALA500 GLY501 MET502 GLN503 SER504 VAL505 GLU506 HIS507 ILE508 LYS509 ARG510 TYR511 THR512 SER513 ILE514 SER515 THR516 ALA517 ASN518 ASP519 GLN520 GLY521 LYS522 THR523 SER524 GLY525 VAL526 ALA527 ALA528 ILE529 GLY530 VAL531 ILE532 ALA533 ALA534 VAL535 LEU536 GLY537 ILE538 GLU539 ASN540 PRO541 ALA542 GLN543 ILE544 GLY545 THR546 THR547 THR548 PHE549 ARG550 ALA551 PRO552 TYR553 THR554 PRO555 VAL556 SER557 PHE558 ALA559 ALA560 LEU561 ALA562 GLY563 ARG564 THR565 ARG566 GLY567 GLU568 LEU569 LEU570 ASP571 PRO572 ALA573 ARG574 LEU575 THR576 ALA577 MET578 HIS579 PRO580 TRP581 HIS582 LEU583 ALA584 HIS585 GLY586 ALA587 LYS588 PHE589 GLU590 ASP591 VAL592 GLY593 GLN594 TRP595 LYS596 ARG597 PRO598 TRP599 TYR600 TYR601 PRO602 GLN603 ASP604 GLY605 GLU606 SER607 MET608 ASP609 GLU610 ALA611 VAL612 TYR613 ARG614 GLU615 CYS616 LYS617 ALA618 VAL619 ARG620 ASP621 SER622 VAL623 GLY624 MET625 LEU626 ASP627 ALA628 SER629 THR630 LEU631 GLY632 LYS633 ILE634 GLU635 ILE636 ARG637 GLY638 LYS639 ASP640 ALA641 ALA642 GLU643 PHE644 LEU645 ASN646 ARG647 MET648 TYR649 THR650 ASN651 GLY652 TYR653 THR654 LYS655 LEU656 LYS657 VAL658 GLY659 MET660 GLY661 ARG662 TYR663 GLY664 VAL665 MET666 CYS667 LYS668 ALA669 ASP670 GLY671 MET672 ILE673 PHE674 ASP675 ASP676 GLY677 VAL678 THR679 LEU680 ARG681 LEU682 ALA683 GLU684 ASP685 ARG686 PHE687 LEU688 MET689 HIS690 THR691 THR692 THR693 GLY694 GLY695 ALA696 ALA697 ASP698 VAL699 LEU700 ASP701 TRP702 LEU703 GLU704 GLU705 TRP706 LEU707 GLN708 THR709 GLU710 TRP711 PRO712 GLU713 LEU714 ASP715 VAL716 THR717 CYS718 THR719 SER720 VAL721 THR722 GLU723 GLN724 LEU725 ALA726 THR727 VAL728 ALA729 VAL730 VAL731 GLY732 PRO733 ARG734 SER735 ARG736 ASP737 VAL738 ILE739 ALA740 LYS741 LEU742 ALA743 SER744 SER745 LEU746 ASP747 VAL748 SER749 ASN750 ASP751 ALA752 PHE753 LYS754 PHE755 MET756 ALA757 PHE758 GLN759 ASP760 VAL761 THR762 LEU763 ASP764 SER765 GLY766 ILE767 GLU768 ALA769 ARG770 ILE771 SER772 ARG773 ILE774 SER775 PHE776 SER777 GLY778 GLU779 LEU780 ALA781 PHE782 GLU783 ILE784 ALA785 ILE786 PRO787 ALA788 TRP789 HIS790 GLY791 LEU792 GLN793 VAL794 TRP795 GLU796 ASP797 VAL798 TYR799 ALA800 ALA801 GLY802 GLN803 GLU804 PHE805 ASN806 ILE807 THR808 PRO809 TYR810 GLY811 THR812 GLU813 THR814 MET815 HIS816 VAL817 LEU818 ARG819 ALA820 GLU821 LYS822 GLY823 PHE824 ILE825 ILE826 VAL827 GLY828 GLN829 ASP830 THR831 ASP832 GLY833 THR834 VAL835 THR836 PRO837 GLN838 ASP839 ALA840 GLY841 MET842 GLU843 TRP844 VAL845 VAL846 SER847 LYS848 LEU849 LYS850 ASP851 PHE852 VAL853 GLY854 LYS855 ARG856 SER857 PHE858 SER859 ARG860 GLU861 ASP862 ASN863 VAL864 ARG865 GLU866 ASP867 ARG868 LYS869 HIS870 LEU871 VAL872 SER873 VAL874 LEU875 PRO876 VAL877 ASP878 SER879 SER880 LEU881 ARG882 LEU883 ALA884 GLU885 GLY886 ALA887 ALA888 LEU889 VAL890 ALA891 ALA892 ASP893 ALA894 VAL895 ALA896 SER897 GLU898 GLY899 VAL900 THR901 PRO902 MET903 GLU904 GLY905 TRP906 VAL907 THR908 HIS909 ALA910 TYR911 ASN912 SER913 PRO914 ALA915 LEU916 GLY917 ARG918 THR919 PHE920 GLY921 LEU922 ALA923 LEU924 ILE925 LYS926 ASN927 GLY928 ARG929 ASN930 ARG931 ILE932 GLY933 GLU934 VAL935 LEU936 LYS937 THR938 PRO939 VAL940 ASP941 GLY942 GLN943 LEU944 VAL945 ASP946 VAL947 GLN948 VAL949 SER950 ASP951 LEU952 VAL953 LEU954 PHE955 ASP956 PRO957 GLU958 GLY959 SER960 ARG961 ARG962 ASP963
Unit 2 ALA1 ASP2 LEU3 LEU4 PRO5 GLU6 HIS7 PRO8 GLU9 PHE10 LEU11 TRP12 ASN13 ASN14 PRO15 GLU16 PRO17 LYS18 LYS19 SER20 TYR21 ASP22 VAL23 VAL24 ILE25 VAL26 GLY27 GLY28 GLY29 GLY30 HIS31 GLY32 LEU33 ALA34 THR35 ALA36 TYR37 TYR38 LEU39 ALA40 LYS41 ASN42 HIS43 GLY44 ILE45 THR46 ASN47 VAL48 ALA49 VAL50 LEU51 GLU52 LYS53 GLY54 TRP55 LEU56 ALA57 GLY58 GLY59 ASN60 MET61 ALA62 ARG63 ASN64 THR65 THR66 ILE67 ILE68 ARG69 SER70 ASN71 TYR72 LEU73 TRP74 ASP75 GLU76 SER77 ALA78 GLY79 ILE80 TYR81 GLU82 LYS83 SER84 LEU85 LYS86 LEU87 TRP88 GLU89 GLU90 LEU91 PRO92 GLU93 GLU94 LEU95 GLU96 TYR97 ASP98 PHE99 LEU100 PHE101 SER102 GLN103 ARG104 GLY105 VAL106 LEU107 ASN108 LEU109 ALA110 HIS111 THR112 LEU113 GLY114 ASP115 VAL116 ARG117 GLU118 SER119 ILE120 ARG121 ARG122 VAL123 GLU124 ALA125 ASN126 LYS127 PHE128 ASN129 GLY130 VAL131 ASP132 ALA133 GLU134 TRP135 LEU136 THR137 PRO138 GLU139 GLN140 VAL141 LYS142 GLU143 VAL144 CYS145 PRO146 ILE147 ILE148 ASN149 THR150 GLY151 ASP152 ASN153 ILE154 ARG155 TYR156 PRO157 VAL158 MET159 GLY160 ALA161 THR162 TYR163 GLN164 PRO165 ARG166 ALA167 GLY168 ILE169 ALA170 LYS171 HIS172 ASP173 HIS174 VAL175 ALA176 TRP177 ALA178 PHE179 ALA180 ARG181 LYS182 ALA183 ASN184 GLU185 MET186 GLY187 VAL188 ASP189 ILE190 ILE191 GLN192 ASN193 CYS194 GLU195 VAL196 THR197 GLY198 PHE199 LEU200 LYS201 ASP202 GLY203 GLU204 LYS205 VAL206 THR207 GLY208 VAL209 LYS210 THR211 THR212 ARG213 GLY214 THR215 ILE216 LEU217 ALA218 GLY219 LYS220 VAL221 ALA222 LEU223 ALA224 GLY225 ALA226 GLY227 HIS228 SER229 SER230 VAL231 LEU232 ALA233 GLU234 LEU235 ALA236 GLY237 PHE238 GLU239 LEU240 PRO241 ILE242 GLN243 SER244 HIS245 PRO246 LEU247 GLN248 ALA249 LEU250 VAL251 SER252 GLU253 LEU254 PHE255 GLU256 PRO257 VAL258 HIS259 PRO260 THR261 VAL262 VAL263 MET264 SER265 ASN266 HIS267 ILE268 HIS269 VAL270 TYR271 VAL272 SER273 GLN274 ALA275 HIS276 LYS277 GLY278 GLU279 LEU280 VAL281 MET282 GLY283 ALA284 GLY285 ILE286 ASP287 SER288 TYR289 ASN290 GLY291 TYR292 GLY293 GLN294 ARG295 GLY296 ALA297 PHE298 HIS299 VAL300 ILE301 GLU302 GLU303 GLN304 MET305 ALA306 ALA307 ALA308 VAL309 GLU310 LEU311 PHE312 PRO313 ILE314 PHE315 ALA316 ARG317 ALA318 HIS319 VAL320 LEU321 ARG322 THR323 TRP324 GLY325 GLY326 ILE327 VAL328 ASP329 THR330 THR331 MET332 ASP333 ALA334 SER335 PRO336 ILE337 ILE338 SER339 LYS340 THR341 PRO342 ILE343 GLN344 ASN345 LEU346 TYR347 VAL348 ASN349 CYS350 GLY351 TRP352 GLY353 THR354 GLY355 GLY356 PHE357 LYS358 GLY359 THR360 PRO361 GLY362 ALA363 GLY364 TYR365 THR366 LEU367 ALA368 HIS369 THR370 ILE371 ALA372 HIS373 ASP374 GLU375 PRO376 HIS377 LYS378 LEU379 ASN380 ALA381 PRO382 PHE383 ALA384 LEU385 GLU386 ARG387 PHE388 GLU389 THR390 GLY391 HIS392 LEU393 ILE394 ASP395 GLU396 HIS397 GLY398 ALA399 ALA400 ALA401 VAL402 ALA403 HIS404
Unit 3 GLN6 LEU7 ARG8 ARG9 SER10 PRO11 ALA12 ALA13 HIS14 LEU15 ALA16 ALA17 ALA18 MET19 GLU20 ALA21 ALA22 GLU23 VAL24 ALA25 GLY26 GLU27 ARG28 ALA29 VAL30 THR31 LEU32 ARG33 GLU34 VAL35 ALA36 PHE37 THR38 THR39 GLN40 LEU41 GLY42 LEU43 ARG44 ALA45 VAL46 PRO47 GLY48 SER49 THR50 GLY51 HIS52 ALA53 ALA54 LEU55 ALA56 ALA57 ALA58 THR59 GLY60 VAL61 GLY62 LEU63 PRO64 ALA65 ALA66 VAL67 GLY68 GLU69 VAL70 ALA71 GLY72 ASP73 VAL74 SER75 GLY76 THR77 ALA78 VAL79 LEU80 TRP81 LEU82 GLY83 PRO84 ASP85 GLU86 PHE87 LEU88 LEU89 ALA90 ALA91 GLU92 GLU93 ASN94 PRO95 ALA96 LEU97 LEU98 ASP99 THR100 LEU101 GLN102 GLY103 ALA104 LEU105 GLY106 GLN107 GLU108 PRO109 GLY110 GLN111 VAL112 LEU113 ASP114 LEU115 SER116 ALA117 ASN118 ARG119 SER120 VAL121 LEU122 GLN123 LEU124 GLU125 GLY126 PRO127 ALA128 ALA129 ALA130 LEU131 VAL132 LEU133 ARG134 LYS135 SER136 CYS137 PRO138 ALA139 ASP140 LEU141 HIS142 PRO143 ARG144 GLU145 PHE146 GLY147 VAL148 ASN149 ARG150 ALA151 ILE152 THR153 THR154 SER155 LEU156 ALA157 ASN158 ILE159 PRO160 VAL161 LEU162 LEU163 TRP164 ARG165 THR166 GLY167 GLU168 GLN169 SER170 TRP171 ARG172 ILE173 LEU174 PRO175 ARG176 ALA177 SER178 PHE179 THR180 GLU181 HIS182 THR183 VAL184 HIS185 TRP186 LEU187 ILE188 ASP189 ALA190 MET191 SER192 GLU193 PHE194 SER195 ALA196 ALA197 GLU198 VAL199 ALA200
Unit 4 MET1 MET2 LEU3 ILE4 GLU5 CYS6 PRO7 ASN8 CYS9 GLY10 PRO11 ARG12 ASN13 GLU14 ASN15 GLU16 PHE17 LYS18 TYR19 GLY20 GLY21 GLU22 ALA23 HIS24 VAL25 ALA26 TYR27 PRO28 GLU29 ASP30 PRO31 ASN32 ALA33 LEU34 SER35 ASP36 LYS37 GLU38 TRP39 SER40 ARG41 TYR42 LEU43 PHE44 TYR45 ARG46 GLY47 ASN48 LYS49 LYS50 GLY51 ILE52 PHE53 ALA54 GLU55 ARG56 TRP57 VAL58 HIS59 SER60 GLY61 GLY62 CYS63 ARG64 LYS65 TRP66 PHE67 ASN68 ALA69 LEU70 ARG71 ASP72 THR73 VAL74 SER75 TYR76 GLU77 PHE78 LYS79 ALA80 VAL81 TYR82 ARG83 ALA84 GLY85 GLU86 ALA87 ARG88 PRO89 GLN90 LEU91

Ligands
Unit 5 NAD965 SO42500 SO42501 SO42502 SO42504 SO42506 SO42507 SO42509
Unit 6 FAD405 FMN406 PYC801 SO42505 SO42510 SO42511
Unit 7 SO42508
Unit 8 ZN100 SO42503

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany