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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 2,3-DIKETO-5-METHYLTHIOPENTYL-1- PHOSPHATE ENOLASE FROM BACILLUS SUBTILIS
Keywords CRYSTAL STRUCTURE, ENOLASE, METHIONINE SALVAGE PATHWAY, AMINO-ACID BIOSYNTHESIS, ISOMERASE, MAGNESIUM, METAL- BINDING, METHIONINE BIOSYNTHESIS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2ZVI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE  A 395 3031 0
2  Protein   2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE  B 396 3024 0
3  Protein   2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE  C 385 2936 0
4  Protein   2,3-DIKETO-5-METHYLTHIOPENTYL-1-PHOSPHATE ENOLASE  D 388 2954 0
5 Water     308 0 308
total       1872 11945 308

Proteins
Unit 1 SER11 GLU12 LEU13 LEU14 ALA15 THR16 TYR17 LEU18 LEU19 THR20 GLU21 PRO22 ASP25 THR26 GLU27 LYS28 LYS29 ALA30 GLU31 GLN32 ILE33 ALA34 THR35 GLY36 LEU37 THR38 VAL39 GLY40 SER41 TRP42 THR43 ASP44 LEU45 PRO46 LEU47 VAL48 LYS49 GLN50 GLU51 GLN52 MET53 GLN54 LYS55 HIS56 LYS57 GLY58 ARG59 VAL60 ILE61 LYS62 VAL63 GLU64 GLU65 ARG66 ALA70 ALA71 SER72 GLU73 LYS74 GLN75 ALA76 VAL77 ILE78 THR79 ILE80 ALA81 TYR82 PRO83 GLU84 ILE85 ASN86 PHE87 SER88 GLN89 ASP90 ILE91 PRO92 ALA93 LEU94 LEU95 THR96 THR97 VAL98 PHE99 GLY100 LYS101 LEU102 SER103 LEU104 ASP105 GLY106 LYS107 ILE108 LYS109 LEU110 ILE111 ASP112 LEU113 HIS114 PHE115 SER116 GLU117 ALA118 PHE119 LYS120 ARG121 ALA122 LEU123 PRO124 GLY125 PRO126 LYS127 PHE128 GLY129 VAL130 TYR131 GLY132 ILE133 ARG134 LYS135 LEU136 LEU137 GLY138 GLU139 PHE140 GLU141 ARG142 PRO143 LEU144 LEU145 MET146 SER147 ILE148 PHE149 LYS150 GLY151 VAL152 ILE153 GLY154 ARG155 ASP156 LEU157 SER158 ASP159 ILE160 LYS161 GLU162 GLN163 LEU164 ARG165 GLN166 GLN167 ALA168 LEU169 GLY170 GLY171 VAL172 ASP173 LEU174 ILE175 LYS176 ASP177 ASP178 GLU179 ILE180 PHE181 PHE182 GLU183 THR184 GLY185 LEU186 ALA187 PRO188 PHE189 GLU190 THR191 ARG192 ILE193 ALA194 GLU195 GLY196 LYS197 GLN198 ILE199 LEU200 LYS201 GLU202 THR203 TYR204 GLU205 GLN206 THR207 GLY208 HIS209 LYS210 THR211 LEU212 TYR213 ALA214 VAL215 ASN216 LEU217 THR218 GLY219 ARG220 THR221 ALA222 ASP223 LEU224 LYS225 ASP226 LYS227 ALA228 ARG229 ARG230 ALA231 ALA232 GLU233 LEU234 GLY235 ALA236 ASP237 ALA238 LEU239 LEU240 PHE241 ASN242 VAL243 PHE244 ALA245 TYR246 GLY247 LEU248 ASP249 VAL250 MET251 GLN252 GLY253 LEU254 ALA255 GLU256 ASP257 PRO258 GLU259 ILE260 PRO261 VAL262 PRO263 ILE264 MET265 ALA266 HIS267 PRO268 ALA269 VAL270 SER271 GLY272 ALA273 PHE274 THR275 SER276 SER277 PRO278 PHE279 TYR280 GLY281 PHE282 SER283 HIS284 ALA285 LEU286 LEU287 LEU288 GLY289 LYS290 LEU291 ASN292 ARG293 TYR294 CYS295 GLY296 ALA297 ASP298 PHE299 SER300 LEU301 PHE302 PRO303 SER304 PRO305 TYR306 GLY307 SER308 VAL309 ALA310 LEU311 PRO312 ARG313 ALA314 ASP315 ALA316 LEU317 ALA318 ILE319 HIS320 GLU321 GLU322 CYS323 VAL324 ARG325 GLU326 ASP327 ALA328 PHE329 ASN330 GLN331 THR332 PHE333 ALA334 VAL335 PRO336 SER337 ALA338 GLY339 ILE340 HIS341 PRO342 GLY343 MET344 VAL345 PRO346 LEU347 LEU348 MET349 ARG350 ASP351 PHE352 GLY353 ILE354 ASP355 HIS356 ILE357 ILE358 ASN359 ALA360 GLY361 GLY362 GLY363 VAL364 HIS365 GLY366 HIS367 PRO368 ASN369 GLY370 ALA371 GLN372 GLY373 GLY374 GLY375 ARG376 ALA377 PHE378 ARG379 ALA380 ILE381 ILE382 ASP383 ALA384 VAL385 LEU386 GLU387 ALA388 GLN389 PRO390 ILE391 ASP392 GLU393 LYS394 ALA395 GLU396 GLN397 CYS398 LYS399 ASP400 LEU401 LYS402 LEU403 ALA404 LEU405 ASP406 LYS407 TRP408 GLY409 LYS410
Unit 2 SER11 GLU12 LEU13 LEU14 ALA15 THR16 TYR17 LEU18 LEU19 THR20 GLU21 PRO22 GLY23 ALA24 ASP25 THR26 GLU27 LYS28 LYS29 ALA30 GLU31 GLN32 ILE33 ALA34 THR35 GLY36 LEU37 THR38 VAL39 GLY40 SER41 TRP42 THR43 ASP44 LEU45 PRO46 LEU47 VAL48 LYS49 GLN50 GLU51 GLN52 MET53 GLN54 LYS55 HIS56 LYS57 GLY58 ARG59 VAL60 ILE61 LYS62 VAL63 GLU64 GLU65 ARG66 SER72 GLU73 LYS74 GLN75 ALA76 VAL77 ILE78 THR79 ILE80 ALA81 TYR82 PRO83 GLU84 ILE85 ASN86 PHE87 SER88 GLN89 ASP90 ILE91 PRO92 ALA93 LEU94 LEU95 THR96 THR97 VAL98 PHE99 GLY100 LYS101 LEU102 SER103 LEU104 ASP105 GLY106 LYS107 ILE108 LYS109 LEU110 ILE111 ASP112 LEU113 HIS114 PHE115 SER116 GLU117 ALA118 PHE119 LYS120 ARG121 ALA122 LEU123 PRO124 GLY125 PRO126 LYS127 PHE128 GLY129 VAL130 TYR131 GLY132 ILE133 ARG134 LYS135 LEU136 LEU137 GLY138 GLU139 PHE140 GLU141 ARG142 PRO143 LEU144 LEU145 MET146 SER147 ILE148 PHE149 LYS150 GLY151 VAL152 ILE153 GLY154 ARG155 ASP156 LEU157 SER158 ASP159 ILE160 LYS161 GLU162 GLN163 LEU164 ARG165 GLN166 GLN167 ALA168 LEU169 GLY170 GLY171 VAL172 ASP173 LEU174 ILE175 LYS176 ASP177 ASP178 GLU179 ILE180 PHE181 PHE182 GLU183 THR184 GLY185 LEU186 ALA187 PRO188 PHE189 GLU190 THR191 ARG192 ILE193 ALA194 GLU195 GLY196 LYS197 GLN198 ILE199 LEU200 LYS201 GLU202 THR203 TYR204 GLU205 GLN206 THR207 GLY208 HIS209 LYS210 THR211 LEU212 TYR213 ALA214 VAL215 ASN216 LEU217 THR218 GLY219 ARG220 THR221 ALA222 ASP223 LEU224 LYS225 ASP226 LYS227 ALA228 ARG229 ARG230 ALA231 ALA232 GLU233 LEU234 GLY235 ALA236 ASP237 ALA238 LEU239 LEU240 PHE241 ASN242 VAL243 PHE244 ALA245 TYR246 GLY247 LEU248 ASP249 VAL250 MET251 GLN252 GLY253 LEU254 ALA255 GLU256 ASP257 PRO258 GLU259 ILE260 PRO261 VAL262 PRO263 ILE264 MET265 ALA266 HIS267 PRO268 ALA269 VAL270 SER271 GLY272 ALA273 PHE274 THR275 SER276 SER277 PRO278 PHE279 TYR280 GLY281 PHE282 SER283 HIS284 ALA285 LEU286 LEU287 LEU288 GLY289 LYS290 LEU291 ASN292 ARG293 TYR294 CYS295 GLY296 ALA297 ASP298 PHE299 SER300 LEU301 PHE302 PRO303 SER304 PRO305 TYR306 GLY307 SER308 VAL309 ALA310 LEU311 PRO312 ARG313 ALA314 ASP315 ALA316 LEU317 ALA318 ILE319 HIS320 GLU321 GLU322 CYS323 VAL324 ARG325 GLU326 ASP327 ALA328 PHE329 ASN330 GLN331 THR332 PHE333 ALA334 VAL335 PRO336 SER337 ALA338 GLY339 ILE340 HIS341 PRO342 GLY343 MET344 VAL345 PRO346 LEU347 LEU348 MET349 ARG350 ASP351 PHE352 GLY353 ILE354 ASP355 HIS356 ILE357 ILE358 ASN359 ALA360 GLY361 GLY362 GLY363 VAL364 HIS365 GLY366 HIS367 PRO368 ASN369 GLY370 ALA371 GLN372 GLY373 GLY374 GLY375 ARG376 ALA377 PHE378 ARG379 ALA380 ILE381 ILE382 ASP383 ALA384 VAL385 LEU386 GLU387 ALA388 GLN389 PRO390 ILE391 ASP392 GLU393 LYS394 ALA395 GLU396 GLN397 CYS398 LYS399 ASP400 LEU401 LYS402 LEU403 ALA404 LEU405 ASP406 LYS407 TRP408 GLY409 LYS410 ALA411
Unit 3 SER11 GLU12 LEU13 LEU14 ALA15 THR16 TYR17 LEU18 LEU19 THR20 GLU21 PRO22 GLY23 ALA24 ASP25 THR26 GLU27 LYS28 LYS29 ALA30 GLU31 GLN32 ILE33 ALA34 THR35 GLY36 LEU37 THR38 VAL39 VAL48 LYS49 GLN50 GLU51 GLN52 MET53 GLN54 LYS55 HIS56 LYS57 GLY58 ARG59 VAL60 ILE61 LYS62 VAL63 GLU64 GLU65 ARG66 GLU73 LYS74 GLN75 ALA76 VAL77 ILE78 THR79 ILE80 ALA81 TYR82 PRO83 GLU84 ILE85 ASN86 PHE87 SER88 GLN89 ASP90 ILE91 PRO92 ALA93 LEU94 LEU95 THR96 THR97 VAL98 PHE99 GLY100 LYS101 LEU102 SER103 LEU104 ASP105 GLY106 LYS107 ILE108 LYS109 LEU110 ILE111 ASP112 LEU113 HIS114 PHE115 SER116 GLU117 ALA118 PHE119 LYS120 ARG121 ALA122 LEU123 PRO124 GLY125 PRO126 LYS127 PHE128 GLY129 VAL130 TYR131 GLY132 ILE133 ARG134 LYS135 LEU136 LEU137 GLY138 GLU139 PHE140 GLU141 ARG142 PRO143 LEU144 LEU145 MET146 SER147 ILE148 PHE149 LYS150 GLY151 VAL152 ILE153 GLY154 ARG155 ASP156 LEU157 SER158 ASP159 ILE160 LYS161 GLU162 GLN163 LEU164 ARG165 GLN166 GLN167 ALA168 LEU169 GLY170 GLY171 VAL172 ASP173 LEU174 ILE175 LYS176 ASP177 ASP178 GLU179 ILE180 PHE181 PHE182 GLU183 THR184 GLY185 LEU186 ALA187 PRO188 PHE189 GLU190 THR191 ARG192 ILE193 ALA194 GLU195 GLY196 LYS197 GLN198 ILE199 LEU200 LYS201 GLU202 THR203 TYR204 GLU205 GLN206 THR207 GLY208 HIS209 LYS210 THR211 LEU212 TYR213 ALA214 VAL215 ASN216 LEU217 THR218 GLY219 ARG220 THR221 ALA222 ASP223 LEU224 LYS225 ASP226 LYS227 ALA228 ARG229 ARG230 ALA231 ALA232 GLU233 LEU234 GLY235 ALA236 ASP237 ALA238 LEU239 LEU240 PHE241 ASN242 VAL243 PHE244 ALA245 TYR246 GLY247 LEU248 ASP249 VAL250 MET251 GLN252 GLY253 LEU254 ALA255 GLU256 ASP257 PRO258 GLU259 ILE260 PRO261 VAL262 PRO263 ILE264 MET265 ALA266 HIS267 PRO268 ALA269 VAL270 SER271 GLY272 ALA273 PHE274 THR275 SER276 SER277 PRO278 PHE279 TYR280 GLY281 PHE282 SER283 HIS284 ALA285 LEU286 LEU287 LEU288 GLY289 LYS290 LEU291 ASN292 ARG293 TYR294 CYS295 GLY296 ALA297 ASP298 PHE299 SER300 LEU301 PHE302 PRO303 SER304 PRO305 TYR306 GLY307 SER308 VAL309 ALA310 LEU311 PRO312 ARG313 ALA314 ASP315 ALA316 LEU317 ALA318 ILE319 HIS320 GLU321 GLU322 CYS323 VAL324 ARG325 GLU326 ASP327 ALA328 PHE329 ASN330 GLN331 THR332 PHE333 ALA334 VAL335 PRO336 SER337 ALA338 GLY339 ILE340 HIS341 PRO342 GLY343 MET344 VAL345 PRO346 LEU347 LEU348 MET349 ARG350 ASP351 PHE352 GLY353 ILE354 ASP355 HIS356 ILE357 ILE358 ASN359 ALA360 GLY361 GLY362 GLY363 VAL364 HIS365 GLY366 HIS367 PRO368 ASN369 GLY370 ALA371 GLN372 GLY373 GLY374 GLY375 ARG376 ALA377 PHE378 ARG379 ALA380 ILE381 ILE382 ASP383 ALA384 VAL385 LEU386 GLU387 ALA388 GLN389 PRO390 ILE391 ASP392 GLU393 LYS394 ALA395 GLU396 GLN397 CYS398 LYS399 ASP400 LEU401 LYS402 LEU403 ALA404 LEU405 ASP406 LYS407 TRP408 GLY409
Unit 4 SER11 GLU12 LEU13 LEU14 ALA15 THR16 TYR17 LEU18 LEU19 THR20 GLU21 PRO22 GLY23 ALA24 ASP25 THR26 GLU27 LYS28 LYS29 ALA30 GLU31 GLN32 ILE33 ALA34 THR35 GLY36 PRO46 LEU47 VAL48 LYS49 GLN50 GLU51 GLN52 MET53 GLN54 LYS55 HIS56 LYS57 GLY58 ARG59 VAL60 ILE61 LYS62 VAL63 GLU64 GLU65 ARG66 GLU67 LYS74 GLN75 ALA76 VAL77 ILE78 THR79 ILE80 ALA81 TYR82 PRO83 GLU84 ILE85 ASN86 PHE87 SER88 GLN89 ASP90 ILE91 PRO92 ALA93 LEU94 LEU95 THR96 THR97 VAL98 PHE99 GLY100 LYS101 LEU102 SER103 LEU104 ASP105 GLY106 LYS107 ILE108 LYS109 LEU110 ILE111 ASP112 LEU113 HIS114 PHE115 SER116 GLU117 ALA118 PHE119 LYS120 ARG121 ALA122 LEU123 PRO124 GLY125 PRO126 LYS127 PHE128 GLY129 VAL130 TYR131 GLY132 ILE133 ARG134 LYS135 LEU136 LEU137 GLY138 GLU139 PHE140 GLU141 ARG142 PRO143 LEU144 LEU145 MET146 SER147 ILE148 PHE149 LYS150 GLY151 VAL152 ILE153 GLY154 ARG155 ASP156 LEU157 SER158 ASP159 ILE160 LYS161 GLU162 GLN163 LEU164 ARG165 GLN166 GLN167 ALA168 LEU169 GLY170 GLY171 VAL172 ASP173 LEU174 ILE175 LYS176 ASP177 ASP178 GLU179 ILE180 PHE181 PHE182 GLU183 THR184 GLY185 LEU186 ALA187 PRO188 PHE189 GLU190 THR191 ARG192 ILE193 ALA194 GLU195 GLY196 LYS197 GLN198 ILE199 LEU200 LYS201 GLU202 THR203 TYR204 GLU205 GLN206 THR207 GLY208 HIS209 LYS210 THR211 LEU212 TYR213 ALA214 VAL215 ASN216 LEU217 THR218 GLY219 ARG220 THR221 ALA222 ASP223 LEU224 LYS225 ASP226 LYS227 ALA228 ARG229 ARG230 ALA231 ALA232 GLU233 LEU234 GLY235 ALA236 ASP237 ALA238 LEU239 LEU240 PHE241 ASN242 VAL243 PHE244 ALA245 TYR246 GLY247 LEU248 ASP249 VAL250 MET251 GLN252 GLY253 LEU254 ALA255 GLU256 ASP257 PRO258 GLU259 ILE260 PRO261 VAL262 PRO263 ILE264 MET265 ALA266 HIS267 PRO268 ALA269 VAL270 SER271 GLY272 ALA273 PHE274 THR275 SER276 SER277 PRO278 PHE279 TYR280 GLY281 PHE282 SER283 HIS284 ALA285 LEU286 LEU287 LEU288 GLY289 LYS290 LEU291 ASN292 ARG293 TYR294 CYS295 GLY296 ALA297 ASP298 PHE299 SER300 LEU301 PHE302 PRO303 SER304 PRO305 TYR306 GLY307 SER308 VAL309 ALA310 LEU311 PRO312 ARG313 ALA314 ASP315 ALA316 LEU317 ALA318 ILE319 HIS320 GLU321 GLU322 CYS323 VAL324 ARG325 GLU326 ASP327 ALA328 PHE329 ASN330 GLN331 THR332 PHE333 ALA334 VAL335 PRO336 SER337 ALA338 GLY339 ILE340 HIS341 PRO342 GLY343 MET344 VAL345 PRO346 LEU347 LEU348 MET349 ARG350 ASP351 PHE352 GLY353 ILE354 ASP355 HIS356 ILE357 ILE358 ASN359 ALA360 GLY361 GLY362 GLY363 VAL364 HIS365 GLY366 HIS367 PRO368 ASN369 GLY370 ALA371 GLN372 GLY373 GLY374 GLY375 ARG376 ALA377 PHE378 ARG379 ALA380 ILE381 ILE382 ASP383 ALA384 VAL385 LEU386 GLU387 ALA388 GLN389 PRO390 ILE391 ASP392 GLU393 LYS394 ALA395 GLU396 GLN397 CYS398 LYS399 ASP400 LEU401 LYS402 LEU403 ALA404 LEU405 ASP406 LYS407 TRP408 GLY409 LYS410 ALA411 GLU412 ALA413

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany