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Sequence, Chains, Asymmetric and Biological Units

Title CLOSED CONFORMATION OF D-3-HYDROXYBUTYRATE DEHYDROGENASE COM WITH NAD+ AND L-3-HYDROXYBUTYRATE
Keywords SHORT CHAIN DEHYDROGENASE/REDUCTASE, SDR FAMILY, NAD, NADH, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ZTL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  A 260 1879 0
2  Protein   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  B 260 1864 0
3  Protein   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  C 260 1879 0
4  Protein   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  D 260 1879 0
5  Ligand   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  A 3 0 52
6  Ligand   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  B 3 0 52
7  Ligand   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  C 2 0 51
8  Ligand   D(-)-3-HYDROXYBUTYRATE DEHYDROGENASE  D 3 0 57
9 Water     836 0 836
total       1887 7501 1048
Proteins
Unit 1 MET1 LEU2 LYS3 GLY4 LYS5 VAL6 ALA7 VAL8 VAL9 THR10 GLY11 SER12 THR13 SER14 GLY15 ILE16 GLY17 LEU18 GLY19 ILE20 ALA21 THR22 ALA23 LEU24 ALA25 ALA26 GLN27 GLY28 ALA29 ASP30 ILE31 VAL32 LEU33 ASN34 GLY35 PHE36 GLY37 ASP38 ALA39 ALA40 GLU41 ILE42 GLU43 LYS44 VAL45 ARG46 ALA47 GLY48 LEU49 ALA50 ALA51 GLN52 HIS53 GLY54 VAL55 LYS56 VAL57 LEU58 TYR59 ASP60 GLY61 ALA62 ASP63 LEU64 SER65 LYS66 GLY67 GLU68 ALA69 VAL70 ARG71 GLY72 LEU73 VAL74 ASP75 ASN76 ALA77 VAL78 ARG79 GLN80 MET81 GLY82 ARG83 ILE84 ASP85 ILE86 LEU87 VAL88 ASN89 ASN90 ALA91 GLY92 ILE93 GLN94 HIS95 THR96 ALA97 LEU98 ILE99 GLU100 ASP101 PHE102 PRO103 THR104 GLU105 LYS106 TRP107 ASP108 ALA109 ILE110 LEU111 ALA112 LEU113 ASN114 LEU115 SER116 ALA117 VAL118 PHE119 HIS120 GLY121 THR122 ALA123 ALA124 ALA125 LEU126 PRO127 HIS128 MET129 LYS130 LYS131 GLN132 GLY133 PHE134 GLY135 ARG136 ILE137 ILE138 ASN139 ILE140 ALA141 SER142 ALA143 HIS144 GLY145 LEU146 VAL147 ALA148 SER149 ALA150 ASN151 LYS152 SER153 ALA154 TYR155 VAL156 ALA157 ALA158 LYS159 HIS160 GLY161 VAL162 VAL163 GLY164 PHE165 THR166 LYS167 VAL168 THR169 ALA170 LEU171 GLU172 THR173 ALA174 GLY175 GLN176 GLY177 ILE178 THR179 ALA180 ASN181 ALA182 ILE183 CYS184 PRO185 GLY186 TRP187 VAL188 ARG189 THR190 PRO191 LEU192 VAL193 GLU194 LYS195 GLN196 ILE197 SER198 ALA199 LEU200 ALA201 GLU202 LYS203 ASN204 GLY205 VAL206 ASP207 GLN208 GLU209 THR210 ALA211 ALA212 ARG213 GLU214 LEU215 LEU216 SER217 GLU218 LYS219 GLN220 PRO221 SER222 LEU223 GLN224 PHE225 VAL226 THR227 PRO228 GLU229 GLN230 LEU231 GLY232 GLY233 THR234 ALA235 VAL236 PHE237 LEU238 ALA239 SER240 ASP241 ALA242 ALA243 ALA244 GLN245 ILE246 THR247 GLY248 THR249 THR250 VAL251 SER252 VAL253 ASP254 GLY255 GLY256 TRP257 THR258 ALA259 ARG260
Unit 2 MET1 LEU2 LYS3 GLY4 LYS5 VAL6 ALA7 VAL8 VAL9 THR10 GLY11 SER12 THR13 SER14 GLY15 ILE16 GLY17 LEU18 GLY19 ILE20 ALA21 THR22 ALA23 LEU24 ALA25 ALA26 GLN27 GLY28 ALA29 ASP30 ILE31 VAL32 LEU33 ASN34 GLY35 PHE36 GLY37 ASP38 ALA39 ALA40 GLU41 ILE42 GLU43 LYS44 VAL45 ARG46 ALA47 GLY48 LEU49 ALA50 ALA51 GLN52 HIS53 GLY54 VAL55 LYS56 VAL57 LEU58 TYR59 ASP60 GLY61 ALA62 ASP63 LEU64 SER65 LYS66 GLY67 GLU68 ALA69 VAL70 ARG71 GLY72 LEU73 VAL74 ASP75 ASN76 ALA77 VAL78 ARG79 GLN80 MET81 GLY82 ARG83 ILE84 ASP85 ILE86 LEU87 VAL88 ASN89 ASN90 ALA91 GLY92 ILE93 GLN94 HIS95 THR96 ALA97 LEU98 ILE99 GLU100 ASP101 PHE102 PRO103 THR104 GLU105 LYS106 TRP107 ASP108 ALA109 ILE110 LEU111 ALA112 LEU113 ASN114 LEU115 SER116 ALA117 VAL118 PHE119 HIS120 GLY121 THR122 ALA123 ALA124 ALA125 LEU126 PRO127 HIS128 MET129 LYS130 LYS131 GLN132 GLY133 PHE134 GLY135 ARG136 ILE137 ILE138 ASN139 ILE140 ALA141 SER142 ALA143 HIS144 GLY145 LEU146 VAL147 ALA148 SER149 ALA150 ASN151 LYS152 SER153 ALA154 TYR155 VAL156 ALA157 ALA158 LYS159 HIS160 GLY161 VAL162 VAL163 GLY164 PHE165 THR166 LYS167 VAL168 THR169 ALA170 LEU171 GLU172 THR173 ALA174 GLY175 GLN176 GLY177 ILE178 THR179 ALA180 ASN181 ALA182 ILE183 CYS184 PRO185 GLY186 TRP187 VAL188 ARG189 THR190 PRO191 LEU192 VAL193 GLU194 LYS195 GLN196 ILE197 SER198 ALA199 LEU200 ALA201 GLU202 LYS203 ASN204 GLY205 VAL206 ASP207 GLN208 GLU209 THR210 ALA211 ALA212 ARG213 GLU214 LEU215 LEU216 SER217 GLU218 LYS219 GLN220 PRO221 SER222 LEU223 GLN224 PHE225 VAL226 THR227 PRO228 GLU229 GLN230 LEU231 GLY232 GLY233 THR234 ALA235 VAL236 PHE237 LEU238 ALA239 SER240 ASP241 ALA242 ALA243 ALA244 GLN245 ILE246 THR247 GLY248 THR249 THR250 VAL251 SER252 VAL253 ASP254 GLY255 GLY256 TRP257 THR258 ALA259 ARG260
Unit 3 MET1 LEU2 LYS3 GLY4 LYS5 VAL6 ALA7 VAL8 VAL9 THR10 GLY11 SER12 THR13 SER14 GLY15 ILE16 GLY17 LEU18 GLY19 ILE20 ALA21 THR22 ALA23 LEU24 ALA25 ALA26 GLN27 GLY28 ALA29 ASP30 ILE31 VAL32 LEU33 ASN34 GLY35 PHE36 GLY37 ASP38 ALA39 ALA40 GLU41 ILE42 GLU43 LYS44 VAL45 ARG46 ALA47 GLY48 LEU49 ALA50 ALA51 GLN52 HIS53 GLY54 VAL55 LYS56 VAL57 LEU58 TYR59 ASP60 GLY61 ALA62 ASP63 LEU64 SER65 LYS66 GLY67 GLU68 ALA69 VAL70 ARG71 GLY72 LEU73 VAL74 ASP75 ASN76 ALA77 VAL78 ARG79 GLN80 MET81 GLY82 ARG83 ILE84 ASP85 ILE86 LEU87 VAL88 ASN89 ASN90 ALA91 GLY92 ILE93 GLN94 HIS95 THR96 ALA97 LEU98 ILE99 GLU100 ASP101 PHE102 PRO103 THR104 GLU105 LYS106 TRP107 ASP108 ALA109 ILE110 LEU111 ALA112 LEU113 ASN114 LEU115 SER116 ALA117 VAL118 PHE119 HIS120 GLY121 THR122 ALA123 ALA124 ALA125 LEU126 PRO127 HIS128 MET129 LYS130 LYS131 GLN132 GLY133 PHE134 GLY135 ARG136 ILE137 ILE138 ASN139 ILE140 ALA141 SER142 ALA143 HIS144 GLY145 LEU146 VAL147 ALA148 SER149 ALA150 ASN151 LYS152 SER153 ALA154 TYR155 VAL156 ALA157 ALA158 LYS159 HIS160 GLY161 VAL162 VAL163 GLY164 PHE165 THR166 LYS167 VAL168 THR169 ALA170 LEU171 GLU172 THR173 ALA174 GLY175 GLN176 GLY177 ILE178 THR179 ALA180 ASN181 ALA182 ILE183 CYS184 PRO185 GLY186 TRP187 VAL188 ARG189 THR190 PRO191 LEU192 VAL193 GLU194 LYS195 GLN196 ILE197 SER198 ALA199 LEU200 ALA201 GLU202 LYS203 ASN204 GLY205 VAL206 ASP207 GLN208 GLU209 THR210 ALA211 ALA212 ARG213 GLU214 LEU215 LEU216 SER217 GLU218 LYS219 GLN220 PRO221 SER222 LEU223 GLN224 PHE225 VAL226 THR227 PRO228 GLU229 GLN230 LEU231 GLY232 GLY233 THR234 ALA235 VAL236 PHE237 LEU238 ALA239 SER240 ASP241 ALA242 ALA243 ALA244 GLN245 ILE246 THR247 GLY248 THR249 THR250 VAL251 SER252 VAL253 ASP254 GLY255 GLY256 TRP257 THR258 ALA259 ARG260
Unit 4 MET1 LEU2 LYS3 GLY4 LYS5 VAL6 ALA7 VAL8 VAL9 THR10 GLY11 SER12 THR13 SER14 GLY15 ILE16 GLY17 LEU18 GLY19 ILE20 ALA21 THR22 ALA23 LEU24 ALA25 ALA26 GLN27 GLY28 ALA29 ASP30 ILE31 VAL32 LEU33 ASN34 GLY35 PHE36 GLY37 ASP38 ALA39 ALA40 GLU41 ILE42 GLU43 LYS44 VAL45 ARG46 ALA47 GLY48 LEU49 ALA50 ALA51 GLN52 HIS53 GLY54 VAL55 LYS56 VAL57 LEU58 TYR59 ASP60 GLY61 ALA62 ASP63 LEU64 SER65 LYS66 GLY67 GLU68 ALA69 VAL70 ARG71 GLY72 LEU73 VAL74 ASP75 ASN76 ALA77 VAL78 ARG79 GLN80 MET81 GLY82 ARG83 ILE84 ASP85 ILE86 LEU87 VAL88 ASN89 ASN90 ALA91 GLY92 ILE93 GLN94 HIS95 THR96 ALA97 LEU98 ILE99 GLU100 ASP101 PHE102 PRO103 THR104 GLU105 LYS106 TRP107 ASP108 ALA109 ILE110 LEU111 ALA112 LEU113 ASN114 LEU115 SER116 ALA117 VAL118 PHE119 HIS120 GLY121 THR122 ALA123 ALA124 ALA125 LEU126 PRO127 HIS128 MET129 LYS130 LYS131 GLN132 GLY133 PHE134 GLY135 ARG136 ILE137 ILE138 ASN139 ILE140 ALA141 SER142 ALA143 HIS144 GLY145 LEU146 VAL147 ALA148 SER149 ALA150 ASN151 LYS152 SER153 ALA154 TYR155 VAL156 ALA157 ALA158 LYS159 HIS160 GLY161 VAL162 VAL163 GLY164 PHE165 THR166 LYS167 VAL168 THR169 ALA170 LEU171 GLU172 THR173 ALA174 GLY175 GLN176 GLY177 ILE178 THR179 ALA180 ASN181 ALA182 ILE183 CYS184 PRO185 GLY186 TRP187 VAL188 ARG189 THR190 PRO191 LEU192 VAL193 GLU194 LYS195 GLN196 ILE197 SER198 ALA199 LEU200 ALA201 GLU202 LYS203 ASN204 GLY205 VAL206 ASP207 GLN208 GLU209 THR210 ALA211 ALA212 ARG213 GLU214 LEU215 LEU216 SER217 GLU218 LYS219 GLN220 PRO221 SER222 LEU223 GLN224 PHE225 VAL226 THR227 PRO228 GLU229 GLN230 LEU231 GLY232 GLY233 THR234 ALA235 VAL236 PHE237 LEU238 ALA239 SER240 ASP241 ALA242 ALA243 ALA244 GLN245 ILE246 THR247 GLY248 THR249 THR250 VAL251 SER252 VAL253 ASP254 GLY255 GLY256 TRP257 THR258 ALA259 ARG260
Ligands
Unit 5 NAD300 3HL301 MG406
Unit 6 NAD300 3HL301 MG401
Unit 7 NAD300 3HL301
Unit 8 NAD300 3HL301 GOL902
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany