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Sequence, Chains, Asymmetric and Biological Units

Title T-STATE STRUCTURE OF ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS CASEI
Keywords OXIDOREDUCTASE, ROSSMANN FOLD, CYTOPLASM, GLYCOLYSIS, NAD, PHOSPHOPROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ZQY     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE  A 305 2334 0
2  Protein   L-LACTATE DEHYDROGENASE  B 308 2359 0
3  Protein   L-LACTATE DEHYDROGENASE  C 316 2424 0
4  Protein   L-LACTATE DEHYDROGENASE  D 305 2334 0
5  Ligand   L-LACTATE DEHYDROGENASE  A 3 0 12
6  Ligand   L-LACTATE DEHYDROGENASE  B 3 0 12
7  Ligand   L-LACTATE DEHYDROGENASE  C 1 0 4
8  Ligand   L-LACTATE DEHYDROGENASE  D 1 0 4
9 Water     320 0 320
total       1562 9451 352
Proteins
Unit 1 GLN21 LYS22 VAL23 ILE24 LEU25 VAL26 GLY27 ASP28 GLY29 ALA30 VAL31 GLY32 SER33 SER34 TYR35 ALA36 TYR37 ALA38 MET39 VAL40 LEU41 GLN42 GLY43 ILE44 ALA45 GLN46 GLU47 ILE48 GLY49 ILE50 VAL51 ASP52 ILE53 PHE54 LYS55 ASP56 LYS57 THR58 LYS59 GLY60 ASP61 ALA62 ILE63 ASP64 LEU65 SER66 ASN67 ALA68 LEU69 PRO70 PHE71 THR72 SER73 PRO75 LYS76 LYS77 ILE78 TYR79 SER80 ALA81 GLU82 TYR83 SER84 ASP85 ALA86 LYS87 ASP88 ALA89 ASP90 LEU91 VAL92 VAL93 ILE94 THR95 ALA96 GLY97 ALA98 PRO99 GLY103 GLU104 THR105 ARG106 LEU107 ASP108 LEU109 VAL110 ASN111 LYS112 ASN113 LEU114 LYS115 ILE116 LEU117 LYS118 SER119 ILE120 VAL121 ASP122 PRO123 ILE124 VAL125 ASP126 SER127 GLY128 PHE129 ASN130 GLY131 ILE132 PHE133 LEU134 VAL135 ALA136 ALA137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 ALA146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 PHE153 PRO154 LYS155 ASN156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 SER164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 GLN172 SER173 ILE174 ALA175 GLU176 MET177 VAL178 ASN179 VAL180 ASP181 ALA182 ARG183 SER184 VAL185 HIS186 ALA187 TYR188 ILE189 MET190 GLY191 GLU192 HIS193 GLY194 ASP195 THR196 GLU197 PHE198 PRO199 VAL200 TRP201 SER202 HIS203 ALA204 ASN205 ILE206 GLY207 GLY208 VAL209 THR210 ILE211 ALA212 GLU213 TRP214 VAL215 LYS216 ALA217 HIS218 PRO219 GLU220 ILE221 LYS222 GLU223 ASP224 LYS225 LEU226 VAL227 LYS228 MET229 PHE230 GLU231 ASP232 VAL233 ARG234 ASP235 ALA236 ALA237 TYR238 GLU239 ILE240 ILE241 LYS242 LEU243 LYS244 GLY245 ALA246 THR247 PHE248 TYR249 GLY250 ILE251 ALA252 THR253 ALA254 LEU255 ALA256 ARG257 ILE258 SER259 LYS260 ALA261 ILE262 LEU263 ASN264 ASP265 GLU266 ASN267 ALA268 VAL269 LEU270 PRO271 LEU272 SER273 VAL274 TYR275 MET276 ASP277 GLY278 GLN279 TYR280 GLY281 LEU282 ASN283 ASP284 ILE285 TYR286 ILE287 GLY288 THR289 PRO290 ALA291 VAL292 ILE293 ASN294 ARG295 ASN296 GLY297 ILE298 GLN299 ASN300 ILE301 LEU302 GLU303 ILE304 PRO305 LEU306 THR307 ASP308 HIS309 GLU310 GLU311 GLU312 SER313 MET314 GLN315 LYS316 SER317 ALA318 SER319 GLN320 LEU321 LYS322 LYS323 VAL324 LEU325 THR326 ASP327 ALA328 PHE329
Unit 2 GLN21 LYS22 VAL23 ILE24 LEU25 VAL26 GLY27 ASP28 GLY29 ALA30 VAL31 GLY32 SER33 SER34 TYR35 ALA36 TYR37 ALA38 MET39 VAL40 LEU41 GLN42 GLY43 ILE44 ALA45 GLN46 GLU47 ILE48 GLY49 ILE50 VAL51 ASP52 ILE53 PHE54 LYS55 ASP56 LYS57 THR58 LYS59 GLY60 ASP61 ALA62 ILE63 ASP64 LEU65 SER66 ASN67 ALA68 LEU69 PRO70 PHE71 THR72 SER73 PRO75 LYS76 LYS77 ILE78 TYR79 SER80 ALA81 GLU82 TYR83 SER84 ASP85 ALA86 LYS87 ASP88 ALA89 ASP90 LEU91 VAL92 VAL93 ILE94 THR95 ALA96 GLY97 ALA98 PRO99 GLN100 LYS101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 ASP108 LEU109 VAL110 ASN111 LYS112 ASN113 LEU114 LYS115 ILE116 LEU117 LYS118 SER119 ILE120 VAL121 ASP122 PRO123 ILE124 VAL125 ASP126 SER127 GLY128 PHE129 ASN130 GLY131 ILE132 PHE133 LEU134 VAL135 ALA136 ALA137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 ALA146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 PHE153 PRO154 LYS155 ASN156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 SER164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 GLN172 SER173 ILE174 ALA175 GLU176 MET177 VAL178 ASN179 VAL180 ASP181 ALA182 ARG183 SER184 VAL185 HIS186 ALA187 TYR188 ILE189 MET190 GLY191 GLU192 HIS193 GLY194 ASP195 THR196 GLU197 PHE198 PRO199 VAL200 TRP201 SER202 HIS203 ALA204 ASN205 ILE206 GLY207 GLY208 VAL209 THR210 ILE211 ALA212 GLU213 TRP214 VAL215 LYS216 ALA217 HIS218 PRO219 GLU220 ILE221 LYS222 GLU223 ASP224 LYS225 LEU226 VAL227 LYS228 MET229 PHE230 GLU231 ASP232 VAL233 ARG234 ASP235 ALA236 ALA237 TYR238 GLU239 ILE240 ILE241 LYS242 LEU243 LYS244 GLY245 ALA246 THR247 PHE248 TYR249 GLY250 ILE251 ALA252 THR253 ALA254 LEU255 ALA256 ARG257 ILE258 SER259 LYS260 ALA261 ILE262 LEU263 ASN264 ASP265 GLU266 ASN267 ALA268 VAL269 LEU270 PRO271 LEU272 SER273 VAL274 TYR275 MET276 ASP277 GLY278 GLN279 TYR280 GLY281 LEU282 ASN283 ASP284 ILE285 TYR286 ILE287 GLY288 THR289 PRO290 ALA291 VAL292 ILE293 ASN294 ARG295 ASN296 GLY297 ILE298 GLN299 ASN300 ILE301 LEU302 GLU303 ILE304 PRO305 LEU306 THR307 ASP308 HIS309 GLU310 GLU311 GLU312 SER313 MET314 GLN315 LYS316 SER317 ALA318 SER319 GLN320 LEU321 LYS322 LYS323 VAL324 LEU325 THR326 ASP327 ALA328 PHE329
Unit 3 GLN21 LYS22 VAL23 ILE24 LEU25 VAL26 GLY27 ASP28 GLY29 ALA30 VAL31 GLY32 SER33 SER34 TYR35 ALA36 TYR37 ALA38 MET39 VAL40 LEU41 GLN42 GLY43 ILE44 ALA45 GLN46 GLU47 ILE48 GLY49 ILE50 VAL51 ASP52 ILE53 PHE54 LYS55 ASP56 LYS57 THR58 LYS59 GLY60 ASP61 ALA62 ILE63 ASP64 LEU65 SER66 ASN67 ALA68 LEU69 PRO70 PHE71 THR72 SER73 PRO75 LYS76 LYS77 ILE78 TYR79 SER80 ALA81 GLU82 TYR83 SER84 ASP85 ALA86 LYS87 ASP88 ALA89 ASP90 LEU91 VAL92 VAL93 ILE94 THR95 ALA96 GLY97 ALA98 PRO99 GLN100 LYS101 PRO102 GLY103 GLU104 THR105 ARG106 LEU107 ASP108 LEU109 VAL110 ASN111 LYS112 ASN113 LEU114 LYS115 ILE116 LEU117 LYS118 SER119 ILE120 VAL121 ASP122 PRO123 ILE124 VAL125 ASP126 SER127 GLY128 PHE129 ASN130 GLY131 ILE132 PHE133 LEU134 VAL135 ALA136 ALA137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 ALA146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 PHE153 PRO154 LYS155 ASN156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 SER164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 GLN172 SER173 ILE174 ALA175 GLU176 MET177 VAL178 ASN179 VAL180 ASP181 ALA182 ARG183 SER184 VAL185 HIS186 ALA187 TYR188 ILE189 MET190 GLY191 GLU192 HIS193 GLY194 ASP195 THR196 GLU197 PHE198 PRO199 VAL200 TRP201 SER202 HIS203 ALA204 ASN205 ILE206 GLY207 GLY208 VAL209 THR210 ILE211 ALA212 GLU213 TRP214 VAL215 LYS216 ALA217 HIS218 PRO219 GLU220 ILE221 LYS222 GLU223 ASP224 LYS225 LEU226 VAL227 LYS228 MET229 PHE230 GLU231 ASP232 VAL233 ARG234 ASP235 ALA236 ALA237 TYR238 GLU239 ILE240 ILE241 LYS242 LEU243 LYS244 GLY245 ALA246 THR247 PHE248 TYR249 GLY250 ILE251 ALA252 THR253 ALA254 LEU255 ALA256 ARG257 ILE258 SER259 LYS260 ALA261 ILE262 LEU263 ASN264 ASP265 GLU266 ASN267 ALA268 VAL269 LEU270 PRO271 LEU272 SER273 VAL274 TYR275 MET276 ASP277 GLY278 GLN279 TYR280 GLY281 LEU282 ASN283 ASP284 ILE285 TYR286 ILE287 GLY288 THR289 PRO290 ALA291 VAL292 ILE293 ASN294 ARG295 ASN296 GLY297 ILE298 GLN299 ASN300 ILE301 LEU302 GLU303 ILE304 PRO305 LEU306 THR307 ASP308 HIS309 GLU310 GLU311 GLU312 SER313 MET314 GLN315 LYS316 SER317 ALA318 SER319 GLN320 LEU321 LYS322 LYS323 VAL324 LEU325 THR326 ASP327 ALA328 PHE329 ALA330 LYS331 ASN332 ASP333 ILE334 GLU335 THR336 ARG337
Unit 4 GLN21 LYS22 VAL23 ILE24 LEU25 VAL26 GLY27 ASP28 GLY29 ALA30 VAL31 GLY32 SER33 SER34 TYR35 ALA36 TYR37 ALA38 MET39 VAL40 LEU41 GLN42 GLY43 ILE44 ALA45 GLN46 GLU47 ILE48 GLY49 ILE50 VAL51 ASP52 ILE53 PHE54 LYS55 ASP56 LYS57 THR58 LYS59 GLY60 ASP61 ALA62 ILE63 ASP64 LEU65 SER66 ASN67 ALA68 LEU69 PRO70 PHE71 THR72 SER73 PRO75 LYS76 LYS77 ILE78 TYR79 SER80 ALA81 GLU82 TYR83 SER84 ASP85 ALA86 LYS87 ASP88 ALA89 ASP90 LEU91 VAL92 VAL93 ILE94 THR95 ALA96 GLY97 ALA98 PRO99 GLY103 GLU104 THR105 ARG106 LEU107 ASP108 LEU109 VAL110 ASN111 LYS112 ASN113 LEU114 LYS115 ILE116 LEU117 LYS118 SER119 ILE120 VAL121 ASP122 PRO123 ILE124 VAL125 ASP126 SER127 GLY128 PHE129 ASN130 GLY131 ILE132 PHE133 LEU134 VAL135 ALA136 ALA137 ASN138 PRO139 VAL140 ASP141 ILE142 LEU143 THR144 TYR145 ALA146 THR147 TRP148 LYS149 LEU150 SER151 GLY152 PHE153 PRO154 LYS155 ASN156 ARG157 VAL158 VAL159 GLY160 SER161 GLY162 THR163 SER164 LEU165 ASP166 THR167 ALA168 ARG169 PHE170 ARG171 GLN172 SER173 ILE174 ALA175 GLU176 MET177 VAL178 ASN179 VAL180 ASP181 ALA182 ARG183 SER184 VAL185 HIS186 ALA187 TYR188 ILE189 MET190 GLY191 GLU192 HIS193 GLY194 ASP195 THR196 GLU197 PHE198 PRO199 VAL200 TRP201 SER202 HIS203 ALA204 ASN205 ILE206 GLY207 GLY208 VAL209 THR210 ILE211 ALA212 GLU213 TRP214 VAL215 LYS216 ALA217 HIS218 PRO219 GLU220 ILE221 LYS222 GLU223 ASP224 LYS225 LEU226 VAL227 LYS228 MET229 PHE230 GLU231 ASP232 VAL233 ARG234 ASP235 ALA236 ALA237 TYR238 GLU239 ILE240 ILE241 LYS242 LEU243 LYS244 GLY245 ALA246 THR247 PHE248 TYR249 GLY250 ILE251 ALA252 THR253 ALA254 LEU255 ALA256 ARG257 ILE258 SER259 LYS260 ALA261 ILE262 LEU263 ASN264 ASP265 GLU266 ASN267 ALA268 VAL269 LEU270 PRO271 LEU272 SER273 VAL274 TYR275 MET276 ASP277 GLY278 GLN279 TYR280 GLY281 LEU282 ASN283 ASP284 ILE285 TYR286 ILE287 GLY288 THR289 PRO290 ALA291 VAL292 ILE293 ASN294 ARG295 ASN296 GLY297 ILE298 GLN299 ASN300 ILE301 LEU302 GLU303 ILE304 PRO305 LEU306 THR307 ASP308 HIS309 GLU310 GLU311 GLU312 SER313 MET314 GLN315 LYS316 SER317 ALA318 SER319 GLN320 LEU321 LYS322 LYS323 VAL324 LEU325 THR326 ASP327 ALA328 PHE329
Ligands
Unit 5 NO31 NO37 NO38
Unit 6 NO32 NO35 NO36
Unit 7 NO33
Unit 8 NO34
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany