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Title | STRUCTURAL BASIS FOR DSRNA RECOGNITION BY NS1 PROTEIN OF HUM INFLUENZA VIRUS A | |
Keywords | DSRNA, PROTEIN-RNA INTERACTION, HOST-VIRUS INTERACTION, INTE ANTIVIRAL SYSTEM EVASION, NUCLEUS, RNA-BINDING, SUPPRESSOR SILENCING, RNA BINDING PROTEIN-RNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2ZKO | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | NON-STRUCTURAL PROTEIN 1 | A | 70 | 562 | 0 |
2 | Protein | NON-STRUCTURAL PROTEIN 1 | B | 70 | 562 | 0 |
3 | RNA | C | 21 | 442 | 0 | |
4 | RNA | D | 21 | 442 | 0 | |
5 | Ligand | NON-STRUCTURAL PROTEIN 1 | A | 1 | 0 | 6 |
6 | Ligand | NON-STRUCTURAL PROTEIN 1 | B | 1 | 0 | 6 |
7 | Water | 205 | 0 | 205 | ||
total | 389 | 2008 | 217 |
Unit 1 | MET1 ASP2 PRO3 ASN4 THR5 VAL6 SER7 SER8 PHE9 GLN10 VAL11 ASP12 CYS13 PHE14 LEU15 TRP16 HIS17 VAL18 ARG19 LYS20 ARG21 VAL22 ALA23 ASP24 GLN25 GLU26 LEU27 GLY28 ASP29 ALA30 PRO31 PHE32 LEU33 ASP34 ARG35 LEU36 ARG37 ARG38 ASP39 GLN40 LYS41 SER42 LEU43 ARG44 GLY45 ARG46 GLY47 SER48 THR49 LEU50 GLY51 LEU52 ASP53 ILE54 GLU55 THR56 ALA57 THR58 ARG59 ALA60 GLY61 LYS62 GLN63 ILE64 VAL65 GLU66 ARG67 ILE68 LEU69 LYS70 |
Unit 2 | MET1 ASP2 PRO3 ASN4 THR5 VAL6 SER7 SER8 PHE9 GLN10 VAL11 ASP12 CYS13 PHE14 LEU15 TRP16 HIS17 VAL18 ARG19 LYS20 ARG21 VAL22 ALA23 ASP24 GLN25 GLU26 LEU27 GLY28 ASP29 ALA30 PRO31 PHE32 LEU33 ASP34 ARG35 LEU36 ARG37 ARG38 ASP39 GLN40 LYS41 SER42 LEU43 ARG44 GLY45 ARG46 GLY47 SER48 THR49 LEU50 GLY51 LEU52 ASP53 ILE54 GLU55 THR56 ALA57 THR58 ARG59 ALA60 GLY61 LYS62 GLN63 ILE64 VAL65 GLU66 ARG67 ILE68 LEU69 LYS70 |
Unit 3 | A1 G2 A3 C4 A5 G6 C7 A8 U9 U10 A11 U12 G13 C14 U15 G16 U17 C18 U19 U20 U21 |
Unit 4 | A1 G2 A3 C4 A5 G6 C7 A8 U9 U10 A11 U12 G13 C14 U15 G16 U17 C18 U19 U20 U21 |
Unit 5 | GOL71 |
Unit 6 | GOL71 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |