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Title | CRYSTAL STRUCTURE OF THE SRA DOMAIN OF MOUSE NP95 IN COMPLEX HEMI-METHYLATED CPG DNA | |
Keywords | PROTEIN-DNA INTERACTION, CELL CYCLE, DEVELOPMENTAL PROTEIN, DAMAGE, DNA REPAIR, DNA-BINDING, LIGASE, METAL-BINDING, NUC PHOSPHOPROTEIN, TRANSCRIPTION, TRANSCRIPTION REGULATION, UB CONJUGATION PATHWAY, ZINC-FINGER | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2ZKE | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | E3 UBIQUITIN-PROTEIN LIGASE UHRF1 | A | 210 | 1647 | 0 |
2 | Other macromolecule | DNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DT 3') | C | 12 | 241 | 0 |
3 | Other macromolecule | DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM) P*DGP*DGP*DTP*DAP*DG)-3') | D | 12 | 226 | 20 |
4 | Water | 19 | 0 | 19 | ||
total | 253 | 2114 | 39 |
Unit 1 | SER404 GLY405 MET406 ALA407 CYS408 VAL409 GLY410 ARG411 THR412 THR413 GLU414 CYS415 THR416 ILE417 VAL418 PRO419 ALA420 ASN421 HIS422 PHE423 GLY424 PRO425 ILE426 PRO427 GLY428 VAL429 PRO430 VAL431 GLY432 THR433 MET434 TRP435 ARG436 PHE437 ARG438 VAL439 GLN440 VAL441 SER442 GLU443 SER444 GLY445 VAL446 HIS447 ARG448 PRO449 HIS450 VAL451 ALA452 GLY453 ILE454 HIS455 GLY456 ARG457 SER458 ASN459 ASP460 GLY461 ALA462 TYR463 SER464 LEU465 VAL466 LEU467 ALA468 GLY469 GLY470 TYR471 GLU472 ASP473 ASP474 VAL475 ASP476 ASN477 GLY478 ASN479 TYR480 PHE481 THR482 TYR483 THR484 GLY485 SER486 GLY487 GLY488 ARG489 ASP490 LEU491 SER492 GLY493 ASN494 LYS495 ARG496 THR497 ALA498 GLY499 GLN500 SER501 SER502 ASP503 GLN504 LYS505 LEU506 THR507 ASN508 ASN509 ASN510 ARG511 ALA512 LEU513 ALA514 LEU515 ASN516 CYS517 HIS518 SER519 PRO520 ILE521 ASN522 GLU523 LYS524 GLY525 ALA526 GLU527 ALA528 GLU529 ASP530 TRP531 ARG532 GLN533 GLY534 LYS535 PRO536 VAL537 ARG538 VAL539 VAL540 ARG541 ASN542 MET543 LYS544 GLY545 GLY546 LYS547 HIS548 SER549 LYS550 TYR551 ALA552 PRO553 ALA554 GLU555 GLY556 ASN557 ARG558 TYR559 ASP560 GLY561 ILE562 TYR563 LYS564 VAL565 VAL566 LYS567 TYR568 TRP569 PRO570 GLU571 ARG572 GLY573 LYS574 SER575 GLY576 PHE577 LEU578 VAL579 TRP580 ARG581 TYR582 LEU583 LEU584 ARG585 ARG586 ASP587 ASP588 THR589 GLU590 PRO591 GLU592 PRO593 TRP594 THR595 ARG596 GLU597 GLY598 LYS599 ASP600 ARG601 THR602 ARG603 GLN604 LEU605 GLY606 LEU607 THR608 MET609 GLN610 TYR611 PRO612 GLU613 |
Unit 2 | DC1 DT2 DA3 DC4 DC5 DG6 DG7 DA8 DT9 DT10 DG11 DC12 |
Unit 3 | DG1 DC2 DA3 DA4 DT5 DC6 5CM7 DG8 DG9 DT10 DA11 DG12 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |