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Sequence, Chains, Asymmetric and Biological Units

Title INHIBITOR-BOUND STRUCTURES OF HUMAN PYRUVATE DEHYDROGENASE K
Keywords PDK4, KINASE, ATP-BINDING, INHIBITOR, CARBOHYDRATE METABOLIS GLUCOSE METABOLISM, MITOCHONDRION, PHOSPHOPROTEIN, TRANSFER TRANSIT PEPTIDE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ZDX     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PYRUVATE DEHYDROGENASE KINASE ISOZYME 4  A 337 2720 0
2  Protein   PYRUVATE DEHYDROGENASE KINASE ISOZYME 4  B 344 2775 0
3  Ligand   PYRUVATE DEHYDROGENASE KINASE ISOZYME 4  A 1 0 22
4  Ligand   PYRUVATE DEHYDROGENASE KINASE ISOZYME 4  B 1 0 22
5 Water     79 0 79
total       762 5495 123
Proteins
Unit 1 VAL20 PRO21 ARG22 GLU23 VAL24 GLU25 HIS26 PHE27 SER28 ARG29 TYR30 SER31 PRO32 SER33 PRO34 LEU35 SER36 MET37 LYS38 GLN39 LEU40 LEU41 ASP42 PHE43 GLY44 SER45 GLU46 ASN47 ALA48 CYS49 GLU50 ARG51 THR52 SER53 PHE54 ALA55 PHE56 LEU57 ARG58 GLN59 GLU60 LEU61 PRO62 VAL63 ARG64 LEU65 ALA66 ASN67 ILE68 LEU69 LYS70 GLU71 ILE72 ASP73 ILE74 LEU75 PRO76 THR77 GLN78 LEU79 VAL80 ASN81 THR82 SER83 SER84 VAL85 GLN86 LEU87 VAL88 LYS89 SER90 TRP91 TYR92 ILE93 GLN94 SER95 LEU96 MET97 ASP98 LEU99 VAL100 GLU101 PHE102 HIS103 GLU104 LYS105 SER106 PRO107 ASP108 ASP109 GLN110 LYS111 ALA112 LEU113 SER114 ASP115 PHE116 VAL117 ASP118 THR119 LEU120 ILE121 LYS122 VAL123 ARG124 ASN125 ARG126 HIS127 HIS128 ASN129 VAL130 VAL131 PRO132 THR133 MET134 ALA135 GLN136 GLY137 ILE138 ILE139 GLU140 TYR141 ASN152 GLN153 ASN154 LEU155 GLN156 TYR157 PHE158 LEU159 ASP160 ARG161 PHE162 TYR163 MET164 ASN165 ARG166 ILE167 SER168 THR169 ARG170 MET171 LEU172 MET173 ASN174 GLN175 HIS176 ILE177 LEU178 ILE179 PHE180 SER181 ASP182 SER183 GLN184 THR185 GLY186 ASN187 PRO188 SER189 HIS190 ILE191 GLY192 SER193 ILE194 ASP195 PRO196 ASN197 CYS198 ASP199 VAL200 VAL201 ALA202 VAL203 VAL204 GLN205 ASP206 ALA207 PHE208 GLU209 CYS210 SER211 ARG212 MET213 LEU214 CYS215 ASP216 GLN217 TYR218 TYR219 LEU220 SER221 SER222 PRO223 GLU224 LEU225 LYS226 LEU227 THR228 GLN229 VAL230 ASN231 GLY232 LYS233 PHE234 PRO235 ASP236 GLN237 PRO238 ILE239 HIS240 ILE241 VAL242 TYR243 VAL244 PRO245 SER246 HIS247 LEU248 HIS249 HIS250 MET251 LEU252 PHE253 GLU254 LEU255 PHE256 LYS257 ASN258 ALA259 MET260 ARG261 ALA262 THR263 VAL264 GLU265 HIS266 GLN267 GLU268 ASN269 GLN270 PRO271 SER272 LEU273 THR274 PRO275 ILE276 GLU277 VAL278 ILE279 VAL280 VAL281 LEU282 GLY283 LYS284 GLU285 ASP286 LEU287 THR288 ILE289 LYS290 ILE291 SER292 ASP293 ARG294 GLY295 GLY296 GLY297 VAL298 PRO299 LEU300 ARG301 ILE302 ILE303 ASP304 ARG305 LEU306 PHE307 SER308 TYR309 THR310 PHE330 GLY331 TYR332 GLY333 LEU334 PRO335 ILE336 SER337 ARG338 LEU339 TYR340 ALA341 LYS342 TYR343 PHE344 GLN345 GLY346 ASP347 LEU348 ASN349 LEU350 TYR351 SER352 LEU353 SER354 GLY355 TYR356 GLY357 THR358 ASP359 ALA360 ILE361 ILE362 TYR363 LEU364 LYS365 ALA366 LEU367 SER368 SER369 GLU370 SER371 ILE372 GLU373 LYS374 LEU375 PRO376 VAL377 PHE378 ASN379 LYS380 SER381 ALA382 PHE383 LYS384 HIS385
Unit 2 VAL20 PRO21 ARG22 GLU23 VAL24 GLU25 HIS26 PHE27 SER28 ARG29 TYR30 SER31 PRO32 SER33 PRO34 LEU35 SER36 MET37 LYS38 GLN39 LEU40 LEU41 ASP42 PHE43 GLY44 SER45 GLU46 ASN47 ALA48 CYS49 GLU50 ARG51 THR52 SER53 PHE54 ALA55 PHE56 LEU57 ARG58 GLN59 GLU60 LEU61 PRO62 VAL63 ARG64 LEU65 ALA66 ASN67 ILE68 LEU69 LYS70 GLU71 ILE72 ASP73 ILE74 LEU75 PRO76 THR77 GLN78 LEU79 VAL80 THR82 SER83 SER84 VAL85 GLN86 LEU87 VAL88 LYS89 SER90 TRP91 TYR92 ILE93 GLN94 SER95 LEU96 MET97 ASP98 LEU99 VAL100 GLU101 PHE102 HIS103 GLU104 LYS105 SER106 PRO107 ASP108 ASP109 GLN110 LYS111 ALA112 LEU113 SER114 ASP115 PHE116 VAL117 ASP118 THR119 LEU120 ILE121 LYS122 VAL123 ARG124 ASN125 ARG126 HIS127 HIS128 ASN129 VAL130 VAL131 PRO132 THR133 MET134 ALA135 GLN136 GLY137 ILE138 GLU140 TYR141 LYS142 ASP143 ALA144 CYS145 THR146 VAL147 ASP148 PRO149 VAL150 THR151 ASN152 GLN153 ASN154 LEU155 GLN156 TYR157 PHE158 LEU159 ASP160 ARG161 PHE162 TYR163 MET164 ASN165 ARG166 ILE167 SER168 THR169 ARG170 MET171 LEU172 MET173 ASN174 GLN175 HIS176 ILE177 LEU178 ILE179 PHE180 SER181 ASP182 GLN184 THR185 GLY186 ASN187 PRO188 SER189 HIS190 ILE191 GLY192 SER193 ILE194 ASP195 PRO196 ASN197 CYS198 ASP199 VAL200 VAL201 ALA202 VAL203 VAL204 GLN205 ASP206 ALA207 PHE208 GLU209 CYS210 SER211 ARG212 MET213 LEU214 CYS215 ASP216 GLN217 TYR218 TYR219 LEU220 SER221 SER222 PRO223 GLU224 LEU225 LYS226 LEU227 THR228 GLN229 VAL230 ASN231 GLY232 LYS233 PHE234 PRO235 ASP236 GLN237 PRO238 ILE239 HIS240 ILE241 VAL242 TYR243 VAL244 PRO245 SER246 HIS247 LEU248 HIS249 HIS250 MET251 LEU252 PHE253 GLU254 LEU255 PHE256 LYS257 ASN258 ALA259 MET260 ARG261 ALA262 THR263 VAL264 GLU265 HIS266 GLN267 GLU268 ASN269 GLN270 PRO271 SER272 LEU273 THR274 PRO275 ILE276 GLU277 VAL278 ILE279 VAL280 VAL281 LEU282 GLY283 LYS284 GLU285 ASP286 LEU287 THR288 ILE289 LYS290 ILE291 SER292 ASP293 ARG294 GLY295 GLY296 GLY297 VAL298 PRO299 LEU300 ARG301 ILE302 ILE303 ASP304 ARG305 LEU306 PHE307 SER308 TYR309 TYR332 GLY333 LEU334 PRO335 ILE336 SER337 ARG338 LEU339 TYR340 ALA341 LYS342 TYR343 PHE344 GLN345 GLY346 ASP347 LEU348 ASN349 LEU350 TYR351 SER352 LEU353 SER354 GLY355 TYR356 GLY357 THR358 ASP359 ALA360 ILE361 ILE362 TYR363 LEU364 LYS365 ALA366 LEU367 SER368 SER369 GLU370 SER371 ILE372 GLU373 LYS374 LEU375 PRO376 VAL377 PHE378 ASN379 LYS380 SER381 ALA382 PHE383 LYS384 HIS385 ASP394 TRP395 CYS396
Ligands
Unit 3 P4A500
Unit 4 P4A1500
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany