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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF AN N-TERMINALLY TRUNCATED SELENOPHOSPHATE SYNTHETASE FROM AQUIFEX AEOLICUS
Keywords INTRAMOLECULAR S-S BOND, TRIMER OF DIMERS, ATP-BINDING, KINASE, MAGNESIUM, NUCLEOTIDE-BINDING, SELENIUM, SELENOCYSTEINE, TRANSFERASE, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ZAU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SELENIDE, WATER DIKINASE  A 307 2377 0
2  Protein   SELENIDE, WATER DIKINASE  B 303 2348 0
3  Protein   SELENIDE, WATER DIKINASE  C 304 2352 0
4  Ligand   SELENIDE, WATER DIKINASE  A 1 0 5
5  Ligand   SELENIDE, WATER DIKINASE  B 1 0 5
6  Ligand   SELENIDE, WATER DIKINASE  C 1 0 5
7 Water     441 0 441
total       1358 7077 456
Proteins
Unit 1 GLY28 PHE29 ASN30 ILE31 TYR32 THR33 ASP34 GLU35 SER36 THR37 LEU38 VAL39 SER40 ILE41 GLY42 ASP43 ASP44 ALA45 GLY46 VAL47 TYR48 GLU49 HIS50 ASN51 GLY52 ILE53 ILE54 TRP55 VAL56 TYR57 THR58 VAL59 ASP60 ILE61 ILE62 THR63 PRO64 VAL65 VAL66 ASN67 ASP68 PRO69 TYR70 LEU71 TRP72 GLY73 ALA74 ILE75 SER76 THR77 ALA78 ASN79 ALA80 LEU81 SER82 ASP83 VAL84 TYR85 ALA86 MET87 GLY88 GLY89 ILE90 PRO91 VAL92 ASN93 ALA94 LEU95 ALA96 ILE97 SER98 CYS99 PHE100 ASN101 ASN102 CYS103 GLU104 ILE107 GLU108 ILE109 PHE110 ARG111 GLU112 VAL113 ILE114 ARG115 GLY116 ALA117 LEU118 ASP119 LYS120 LEU121 ARG122 GLU123 ALA124 LYS125 THR126 VAL127 LEU128 LEU129 GLY130 GLY131 HIS132 THR133 ILE134 ASP135 ASP136 LYS137 GLU138 PRO139 LYS140 PHE141 GLY142 LEU143 SER144 VAL145 ALA146 GLY147 ILE148 CYS149 PRO150 GLU151 GLY152 LYS153 TYR154 ILE155 THR156 GLN157 SER158 GLY159 ALA160 GLN161 VAL162 GLY163 GLN164 LEU165 LEU166 ILE167 LEU168 THR169 LYS170 PRO171 ILE172 GLY173 THR174 GLY175 ILE176 LEU177 ILE178 LYS179 GLY180 LEU181 LYS182 GLU183 GLY184 ILE185 LEU186 LYS187 GLU188 GLU189 ASP190 ILE191 ASN192 GLU193 ALA194 ILE195 GLU196 ASN197 MET198 LEU199 ALA200 LEU201 ASN202 ASP203 LYS204 ALA205 ARG206 ASN207 LEU208 MET209 LEU210 SER211 LEU212 ASP213 ALA214 THR215 ALA216 CYS217 THR218 ASP219 VAL220 THR221 GLY222 PHE223 GLY224 LEU225 LEU226 GLY227 HIS228 ALA229 TRP230 ASN231 ILE232 CYS233 LYS234 ASN235 SER236 ASN237 ILE238 GLY239 ALA240 ARG241 ILE242 PHE243 PHE244 GLU245 LYS246 VAL247 PRO248 TYR249 TYR250 GLN251 LEU252 SER253 GLU254 ASN255 LEU256 VAL257 LYS258 LYS259 LYS260 ILE261 TYR262 PRO263 LYS264 GLY265 ALA266 ILE267 GLU268 ASN269 LEU270 ASN271 PHE272 VAL273 LYS274 ASN275 TYR276 LEU277 LYS278 SER279 ASN280 LEU281 ASP282 ASN283 TRP284 LYS285 LEU286 ILE287 LEU288 LEU289 SER290 ASP291 PRO292 VAL293 THR294 SER295 GLY296 GLY297 LEU298 LEU299 PHE300 THR301 ILE302 ASN303 LYS304 GLU305 LYS306 LEU307 GLU308 LYS309 ILE310 ASP311 GLU312 THR313 ALA314 LYS315 GLU316 LEU317 GLU318 VAL319 ASN320 TYR321 TRP322 ILE323 ILE324 GLY325 GLU326 THR327 ILE328 ALA329 GLU330 ASN331 VAL332 LEU333 GLU334 VAL335 LEU336
Unit 2 GLY28 PHE29 ASN30 ILE31 TYR32 THR33 ASP34 GLU35 SER36 THR37 LEU38 VAL39 SER40 ILE41 ASP44 ALA45 GLY46 VAL47 TYR48 GLU49 HIS50 ASN51 GLY52 ILE53 ILE54 TRP55 VAL56 TYR57 THR58 VAL59 ASP60 ILE61 ILE62 THR63 PRO64 VAL65 VAL66 ASN67 ASP68 PRO69 TYR70 LEU71 TRP72 GLY73 ALA74 ILE75 SER76 THR77 ALA78 ASN79 ALA80 LEU81 SER82 ASP83 VAL84 TYR85 ALA86 MET87 GLY88 GLY89 ILE90 PRO91 VAL92 ASN93 ALA94 LEU95 ALA96 ILE97 SER98 CYS99 PHE100 ASN101 ASN102 CYS103 GLU108 ILE109 PHE110 ARG111 GLU112 VAL113 ILE114 ARG115 GLY116 ALA117 LEU118 ASP119 LYS120 LEU121 ARG122 GLU123 ALA124 LYS125 THR126 VAL127 LEU128 LEU129 GLY130 GLY131 HIS132 THR133 ILE134 ASP135 ASP136 LYS137 GLU138 PRO139 LYS140 PHE141 GLY142 LEU143 SER144 VAL145 ALA146 GLY147 ILE148 CYS149 PRO150 GLU151 GLY152 LYS153 TYR154 ILE155 THR156 GLN157 SER158 GLY159 ALA160 GLN161 VAL162 GLY163 GLN164 LEU165 LEU166 ILE167 LEU168 THR169 LYS170 PRO171 ILE172 GLY173 THR174 GLY175 ILE176 LEU177 ILE178 LYS179 GLY180 LEU181 LYS182 GLU183 GLY184 ILE185 LEU186 LYS187 GLU188 GLU189 ASP190 ILE191 ASN192 GLU193 ALA194 ILE195 GLU196 ASN197 MET198 LEU199 ALA200 LEU201 ASN202 ASP203 LYS204 ALA205 ARG206 ASN207 LEU208 MET209 LEU210 SER211 LEU212 ASP213 ALA214 THR215 ALA216 CYS217 THR218 ASP219 VAL220 THR221 GLY222 PHE223 GLY224 LEU225 LEU226 GLY227 HIS228 ALA229 TRP230 ASN231 ILE232 CYS233 LYS234 ASN235 SER236 ASN237 ILE238 GLY239 ALA240 ARG241 ILE242 PHE243 PHE244 GLU245 LYS246 VAL247 PRO248 TYR249 TYR250 GLN251 LEU252 SER253 GLU254 ASN255 LEU256 VAL257 LYS258 LYS259 LYS260 ILE261 TYR262 PRO263 LYS264 GLY265 ALA266 ILE267 GLU268 ASN269 LEU270 ASN271 PHE272 VAL273 LYS274 ASN275 TYR276 LEU277 LYS278 SER279 ASN280 LEU281 ASP282 ASN283 TRP284 LYS285 LEU286 ILE287 LEU288 LEU289 SER290 ASP291 PRO292 VAL293 THR294 SER295 GLY296 GLY297 LEU298 LEU299 PHE300 THR301 ILE302 ASN303 LYS304 GLU305 LYS306 LEU307 GLU308 LYS309 ILE310 ASP311 GLU312 THR313 ALA314 LYS315 GLU316 LEU317 GLU318 VAL319 ASN320 TYR321 TRP322 ILE323 ILE324 GLY325 GLU326 THR327 ILE328 ALA329 GLU330 ASN331 VAL332 LEU333 GLU334 VAL335 LEU336
Unit 3 GLY28 PHE29 ASN30 ILE31 TYR32 THR33 ASP34 GLU35 SER36 THR37 LEU38 VAL39 SER40 ILE41 GLY42 ALA45 GLY46 VAL47 TYR48 GLU49 HIS50 ASN51 GLY52 ILE53 ILE54 TRP55 VAL56 TYR57 THR58 VAL59 ASP60 ILE61 ILE62 THR63 PRO64 VAL65 VAL66 ASN67 ASP68 PRO69 TYR70 LEU71 TRP72 GLY73 ALA74 ILE75 SER76 THR77 ALA78 ASN79 ALA80 LEU81 SER82 ASP83 VAL84 TYR85 ALA86 MET87 GLY88 GLY89 ILE90 PRO91 VAL92 ASN93 ALA94 LEU95 ALA96 ILE97 SER98 CYS99 PHE100 ASN101 ASN102 CYS103 ILE107 GLU108 ILE109 PHE110 ARG111 GLU112 VAL113 ILE114 ARG115 GLY116 ALA117 LEU118 ASP119 LYS120 LEU121 ARG122 GLU123 ALA124 LYS125 THR126 VAL127 LEU128 LEU129 GLY130 GLY131 HIS132 THR133 ILE134 ASP135 ASP136 LYS137 GLU138 PRO139 LYS140 PHE141 GLY142 LEU143 SER144 VAL145 ALA146 GLY147 ILE148 CYS149 PRO150 GLU151 GLY152 LYS153 TYR154 ILE155 THR156 GLN157 SER158 GLY159 ALA160 GLN161 VAL162 GLY163 GLN164 LEU165 LEU166 ILE167 LEU168 THR169 LYS170 PRO171 ILE172 GLY173 THR174 GLY175 ILE176 LEU177 ILE178 LYS179 GLY180 LEU181 LYS182 GLU183 GLY184 ILE185 LEU186 LYS187 GLU188 GLU189 ASP190 ILE191 ASN192 GLU193 ALA194 ILE195 GLU196 ASN197 MET198 LEU199 ALA200 LEU201 ASN202 ASP203 LYS204 ALA205 ARG206 ASN207 LEU208 MET209 LEU210 SER211 LEU212 ASP213 ALA214 THR215 ALA216 CYS217 THR218 ASP219 VAL220 THR221 GLY222 PHE223 GLY224 LEU225 LEU226 GLY227 HIS228 ALA229 TRP230 ASN231 ILE232 CYS233 LYS234 ASN235 SER236 ASN237 ILE238 GLY239 ALA240 ARG241 ILE242 PHE243 PHE244 GLU245 LYS246 VAL247 PRO248 TYR249 TYR250 GLN251 LEU252 SER253 GLU254 ASN255 LEU256 VAL257 LYS258 LYS259 LYS260 ILE261 TYR262 PRO263 LYS264 GLY265 ALA266 ILE267 GLU268 ASN269 LEU270 ASN271 PHE272 VAL273 LYS274 ASN275 TYR276 LEU277 LYS278 SER279 ASN280 LEU281 ASP282 ASN283 TRP284 LYS285 LEU286 ILE287 LEU288 LEU289 SER290 ASP291 PRO292 VAL293 THR294 SER295 GLY296 GLY297 LEU298 LEU299 PHE300 THR301 ILE302 ASN303 LYS304 GLU305 LYS306 LEU307 GLU308 LYS309 ILE310 ASP311 GLU312 THR313 ALA314 LYS315 GLU316 LEU317 GLU318 VAL319 ASN320 TYR321 TRP322 ILE323 ILE324 GLY325 GLU326 THR327 ILE328 ALA329 GLU330 ASN331 VAL332 LEU333 GLU334 VAL335 LEU336
Ligands
Unit 4 PO4902
Unit 5 PO4903
Unit 6 PO4901
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany