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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ESCHERICHIA COLI GAMMA-GLUTAMYLTRANSPEP COMPLEX WITH AZASERINE PREPARED IN THE DARK
Keywords AZASERINE WITH A DIAZO GROUP, COVALENT BOND WITH THR391, ACYLTRANSFERASE, GLUTATHIONE BIOSYNTHESIS, TRANSFERASE, ZYM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2Z8J     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GAMMA-GLUTAMYLTRANSPEPTIDASE  A 350 2652 0
2  Protein   GAMMA-GLUTAMYLTRANSPEPTIDASE  B 190 1407 0
3  Protein   GAMMA-GLUTAMYLTRANSPEPTIDASE  C 350 2652 0
4  Protein   GAMMA-GLUTAMYLTRANSPEPTIDASE  D 190 1407 0
5  Ligand   GAMMA-GLUTAMYLTRANSPEPTIDASE  B 1 0 12
6  Ligand   GAMMA-GLUTAMYLTRANSPEPTIDASE  D 1 0 12
7 Water     413 0 413
total       1495 8118 437

Proteins
Unit 1 GLU38 ASP39 VAL40 PHE41 HIS42 PRO43 VAL44 ARG45 ALA46 LYS47 GLN48 GLY49 MET50 VAL51 ALA52 SER53 VAL54 ASP55 ALA56 THR57 ALA58 THR59 GLN60 VAL61 GLY62 VAL63 ASP64 ILE65 LEU66 LYS67 GLU68 GLY69 GLY70 ASN71 ALA72 VAL73 ASP74 ALA75 ALA76 VAL77 ALA78 VAL79 GLY80 TYR81 ALA82 LEU83 ALA84 VAL85 THR86 HIS87 PRO88 GLN89 ALA90 GLY91 ASN92 LEU93 GLY94 GLY95 GLY96 GLY97 PHE98 MET99 LEU100 ILE101 ARG102 SER103 LYS104 ASN105 GLY106 ASN107 THR108 THR109 ALA110 ILE111 ASP112 PHE113 ARG114 GLU115 MET116 ALA117 PRO118 ALA119 LYS120 ALA121 THR122 ARG123 ASP124 MET125 PHE126 LEU127 ASP128 ASP129 GLN130 GLY131 ASN132 PRO133 ASP134 SER135 LYS136 LYS137 SER138 LEU139 THR140 SER141 HIS142 LEU143 ALA144 SER145 GLY146 THR147 PRO148 GLY149 THR150 VAL151 ALA152 GLY153 PHE154 SER155 LEU156 ALA157 LEU158 ASP159 LYS160 TYR161 GLY162 THR163 MET164 PRO165 LEU166 ASN167 LYS168 VAL169 VAL170 GLN171 PRO172 ALA173 PHE174 LYS175 LEU176 ALA177 ARG178 ASP179 GLY180 PHE181 ILE182 VAL183 ASN184 ASP185 ALA186 LEU187 ALA188 ASP189 ASP190 LEU191 LYS192 THR193 TYR194 GLY195 SER196 GLU197 VAL198 LEU199 PRO200 ASN201 HIS202 GLU203 ASN204 SER205 LYS206 ALA207 ILE208 PHE209 TRP210 LYS211 GLU212 GLY213 GLU214 PRO215 LEU216 LYS217 LYS218 GLY219 ASP220 THR221 LEU222 VAL223 GLN224 ALA225 ASN226 LEU227 ALA228 LYS229 SER230 LEU231 GLU232 MET233 ILE234 ALA235 GLU236 ASN237 GLY238 PRO239 ASP240 GLU241 PHE242 TYR243 LYS244 GLY245 THR246 ILE247 ALA248 GLU249 GLN250 ILE251 ALA252 GLN253 GLU254 MET255 GLN256 LYS257 ASN258 GLY259 GLY260 LEU261 ILE262 THR263 LYS264 GLU265 ASP266 LEU267 ALA268 ALA269 TYR270 LYS271 ALA272 VAL273 GLU274 ARG275 THR276 PRO277 ILE278 SER279 GLY280 ASP281 TYR282 ARG283 GLY284 TYR285 GLN286 VAL287 TYR288 SER289 MET290 PRO291 PRO292 PRO293 SER294 SER295 GLY296 GLY297 ILE298 HIS299 ILE300 VAL301 GLN302 ILE303 LEU304 ASN305 ILE306 LEU307 GLU308 ASN309 PHE310 ASP311 MET312 LYS313 LYS314 TYR315 GLY316 PHE317 GLY318 SER319 ALA320 ASP321 ALA322 MET323 GLN324 ILE325 MET326 ALA327 GLU328 ALA329 GLU330 LYS331 TYR332 ALA333 TYR334 ALA335 ASP336 ARG337 SER338 GLU339 TYR340 LEU341 GLY342 ASP343 PRO344 ASP345 PHE346 VAL347 LYS348 VAL349 PRO350 TRP351 GLN352 ALA353 LEU354 THR355 ASN356 LYS357 ALA358 TYR359 ALA360 LYS361 SER362 ILE363 ALA364 ASP365 GLN366 ILE367 ASP368 ILE369 ASN370 LYS371 ALA372 LYS373 PRO374 SER375 SER376 GLU377 ILE378 ARG379 PRO380 GLY381 LYS382 LEU383 ALA384 PRO385 TYR386 GLU387
Unit 2 THR391 THR392 HIS393 TYR394 SER395 VAL396 VAL397 ASP398 LYS399 ASP400 GLY401 ASN402 ALA403 VAL404 ALA405 VAL406 THR407 TYR408 THR409 LEU410 ASN411 THR412 THR413 PHE414 GLY415 THR416 GLY417 ILE418 VAL419 ALA420 GLY421 GLU422 SER423 GLY424 ILE425 LEU426 LEU427 ASN428 ASN429 GLN430 MET431 ASP432 ASP433 PHE434 SER435 ALA436 LYS437 PRO438 GLY439 VAL440 PRO441 ASN442 VAL443 TYR444 GLY445 LEU446 VAL447 GLY448 GLY449 ASP450 ALA451 ASN452 ALA453 VAL454 GLY455 PRO456 ASN457 LYS458 ARG459 PRO460 LEU461 SER462 SER463 MET464 SER465 PRO466 THR467 ILE468 VAL469 VAL470 LYS471 ASP472 GLY473 LYS474 THR475 TRP476 LEU477 VAL478 THR479 GLY480 SER481 PRO482 GLY483 GLY484 SER485 ARG486 ILE487 ILE488 THR489 THR490 VAL491 LEU492 GLN493 MET494 VAL495 VAL496 ASN497 SER498 ILE499 ASP500 TYR501 GLY502 LEU503 ASN504 VAL505 ALA506 GLU507 ALA508 THR509 ASN510 ALA511 PRO512 ARG513 PHE514 HIS515 HIS516 GLN517 TRP518 LEU519 PRO520 ASP521 GLU522 LEU523 ARG524 VAL525 GLU526 LYS527 GLY528 PHE529 SER530 PRO531 ASP532 THR533 LEU534 LYS535 LEU536 LEU537 GLU538 ALA539 LYS540 GLY541 GLN542 LYS543 VAL544 ALA545 LEU546 LYS547 GLU548 ALA549 MET550 GLY551 SER552 THR553 GLN554 SER555 ILE556 MET557 VAL558 GLY559 PRO560 ASP561 GLY562 GLU563 LEU564 TYR565 GLY566 ALA567 SER568 ASP569 PRO570 ARG571 SER572 VAL573 ASP574 ASP575 LEU576 THR577 ALA578 GLY579 TYR580
Unit 3 GLU38 ASP39 VAL40 PHE41 HIS42 PRO43 VAL44 ARG45 ALA46 LYS47 GLN48 GLY49 MET50 VAL51 ALA52 SER53 VAL54 ASP55 ALA56 THR57 ALA58 THR59 GLN60 VAL61 GLY62 VAL63 ASP64 ILE65 LEU66 LYS67 GLU68 GLY69 GLY70 ASN71 ALA72 VAL73 ASP74 ALA75 ALA76 VAL77 ALA78 VAL79 GLY80 TYR81 ALA82 LEU83 ALA84 VAL85 THR86 HIS87 PRO88 GLN89 ALA90 GLY91 ASN92 LEU93 GLY94 GLY95 GLY96 GLY97 PHE98 MET99 LEU100 ILE101 ARG102 SER103 LYS104 ASN105 GLY106 ASN107 THR108 THR109 ALA110 ILE111 ASP112 PHE113 ARG114 GLU115 MET116 ALA117 PRO118 ALA119 LYS120 ALA121 THR122 ARG123 ASP124 MET125 PHE126 LEU127 ASP128 ASP129 GLN130 GLY131 ASN132 PRO133 ASP134 SER135 LYS136 LYS137 SER138 LEU139 THR140 SER141 HIS142 LEU143 ALA144 SER145 GLY146 THR147 PRO148 GLY149 THR150 VAL151 ALA152 GLY153 PHE154 SER155 LEU156 ALA157 LEU158 ASP159 LYS160 TYR161 GLY162 THR163 MET164 PRO165 LEU166 ASN167 LYS168 VAL169 VAL170 GLN171 PRO172 ALA173 PHE174 LYS175 LEU176 ALA177 ARG178 ASP179 GLY180 PHE181 ILE182 VAL183 ASN184 ASP185 ALA186 LEU187 ALA188 ASP189 ASP190 LEU191 LYS192 THR193 TYR194 GLY195 SER196 GLU197 VAL198 LEU199 PRO200 ASN201 HIS202 GLU203 ASN204 SER205 LYS206 ALA207 ILE208 PHE209 TRP210 LYS211 GLU212 GLY213 GLU214 PRO215 LEU216 LYS217 LYS218 GLY219 ASP220 THR221 LEU222 VAL223 GLN224 ALA225 ASN226 LEU227 ALA228 LYS229 SER230 LEU231 GLU232 MET233 ILE234 ALA235 GLU236 ASN237 GLY238 PRO239 ASP240 GLU241 PHE242 TYR243 LYS244 GLY245 THR246 ILE247 ALA248 GLU249 GLN250 ILE251 ALA252 GLN253 GLU254 MET255 GLN256 LYS257 ASN258 GLY259 GLY260 LEU261 ILE262 THR263 LYS264 GLU265 ASP266 LEU267 ALA268 ALA269 TYR270 LYS271 ALA272 VAL273 GLU274 ARG275 THR276 PRO277 ILE278 SER279 GLY280 ASP281 TYR282 ARG283 GLY284 TYR285 GLN286 VAL287 TYR288 SER289 MET290 PRO291 PRO292 PRO293 SER294 SER295 GLY296 GLY297 ILE298 HIS299 ILE300 VAL301 GLN302 ILE303 LEU304 ASN305 ILE306 LEU307 GLU308 ASN309 PHE310 ASP311 MET312 LYS313 LYS314 TYR315 GLY316 PHE317 GLY318 SER319 ALA320 ASP321 ALA322 MET323 GLN324 ILE325 MET326 ALA327 GLU328 ALA329 GLU330 LYS331 TYR332 ALA333 TYR334 ALA335 ASP336 ARG337 SER338 GLU339 TYR340 LEU341 GLY342 ASP343 PRO344 ASP345 PHE346 VAL347 LYS348 VAL349 PRO350 TRP351 GLN352 ALA353 LEU354 THR355 ASN356 LYS357 ALA358 TYR359 ALA360 LYS361 SER362 ILE363 ALA364 ASP365 GLN366 ILE367 ASP368 ILE369 ASN370 LYS371 ALA372 LYS373 PRO374 SER375 SER376 GLU377 ILE378 ARG379 PRO380 GLY381 LYS382 LEU383 ALA384 PRO385 TYR386 GLU387
Unit 4 THR391 THR392 HIS393 TYR394 SER395 VAL396 VAL397 ASP398 LYS399 ASP400 GLY401 ASN402 ALA403 VAL404 ALA405 VAL406 THR407 TYR408 THR409 LEU410 ASN411 THR412 THR413 PHE414 GLY415 THR416 GLY417 ILE418 VAL419 ALA420 GLY421 GLU422 SER423 GLY424 ILE425 LEU426 LEU427 ASN428 ASN429 GLN430 MET431 ASP432 ASP433 PHE434 SER435 ALA436 LYS437 PRO438 GLY439 VAL440 PRO441 ASN442 VAL443 TYR444 GLY445 LEU446 VAL447 GLY448 GLY449 ASP450 ALA451 ASN452 ALA453 VAL454 GLY455 PRO456 ASN457 LYS458 ARG459 PRO460 LEU461 SER462 SER463 MET464 SER465 PRO466 THR467 ILE468 VAL469 VAL470 LYS471 ASP472 GLY473 LYS474 THR475 TRP476 LEU477 VAL478 THR479 GLY480 SER481 PRO482 GLY483 GLY484 SER485 ARG486 ILE487 ILE488 THR489 THR490 VAL491 LEU492 GLN493 MET494 VAL495 VAL496 ASN497 SER498 ILE499 ASP500 TYR501 GLY502 LEU503 ASN504 VAL505 ALA506 GLU507 ALA508 THR509 ASN510 ALA511 PRO512 ARG513 PHE514 HIS515 HIS516 GLN517 TRP518 LEU519 PRO520 ASP521 GLU522 LEU523 ARG524 VAL525 GLU526 LYS527 GLY528 PHE529 SER530 PRO531 ASP532 THR533 LEU534 LYS535 LEU536 LEU537 GLU538 ALA539 LYS540 GLY541 GLN542 LYS543 VAL544 ALA545 LEU546 LYS547 GLU548 ALA549 MET550 GLY551 SER552 THR553 GLN554 SER555 ILE556 MET557 VAL558 GLY559 PRO560 ASP561 GLY562 GLU563 LEU564 TYR565 GLY566 ALA567 SER568 ASP569 PRO570 ARG571 SER572 VAL573 ASP574 ASP575 LEU576 THR577 ALA578 GLY579 TYR580

Ligands
Unit 5 AZS390
Unit 6 AZS390

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany