2YZK - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF OROTATE PHOSPHORIBOSYLTRANSFERASE FROM AEROPYRUM PERNIX
• Keywords: ROSSMANN FOLD, GLYCOSYLTRANSFERASE, MAGNESIUM, PYRIMIDINE BIOSYNTHESIS, TRANSFERASE, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2YZK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	OROTATE PHOSPHORIBOSYLTRANSFERASE	A	177	1274	32
2	Protein	OROTATE PHOSPHORIBOSYLTRANSFERASE	B	167	1204	32
3	Protein	OROTATE PHOSPHORIBOSYLTRANSFERASE	C	166	1197	32
4	Protein	OROTATE PHOSPHORIBOSYLTRANSFERASE	D	177	1274	32
5	Ligand	OROTATE PHOSPHORIBOSYLTRANSFERASE	B	1	0	5
6	Ligand	OROTATE PHOSPHORIBOSYLTRANSFERASE	C	1	0	5
7	Water			338	0	338
total				1027	4949	476

Proteins

Unit 1	MSE 1 LEU 2 ALA 3 LYS 4 VAL 5 LEU 6 LYS 7 LYS 8 ARG 9 GLY 10 ALA 11 VAL 12 LEU 13 ARG 14 GLY 15 ASP 16 PHE 17 VAL 18 LEU 19 SER 20 SER 21 GLY 22 ARG 23 ARG 24 SER 25 SER 26 VAL 27 TYR 28 ILE 29 ASP 30 MSE 31 ARG 32 ARG 33 LEU 34 LEU 35 GLY 36 ASP 37 GLU 38 SER 39 SER 40 TYR 41 SER 42 VAL 43 ALA 44 LEU 45 ASP 46 LEU 47 LEU 48 LEU 49 GLU 50 VAL 51 GLY 52 GLY 53 GLN 54 ASP 55 LEU 56 ALA 57 ARG 58 SER 59 SER 60 ALA 61 VAL 62 ILE 63 GLY 64 VAL 65 ALA 66 THR 67 GLY 68 GLY 69 LEU 70 PRO 71 TRP 72 ALA 73 ALA 74 MSE 75 LEU 76 ALA 77 LEU 78 ARG 79 LEU 80 SER 81 LYS 82 PRO 83 LEU 84 GLY 85 TYR 86 VAL 87 ARG 88 PRO 89 GLU 90 ARG 91 LYS 92 GLY 93 HIS 94 GLY 95 THR 96 LEU 97 SER 98 GLN 99 VAL 100 GLU 101 GLY 102 ASP 103 PRO 104 PRO 105 LYS 106 GLY 107 ARG 108 VAL 109 VAL 110 VAL 111 VAL 112 ASP 113 ASP 114 VAL 115 ALA 116 THR 117 THR 118 GLY 119 THR 120 SER 121 ILE 122 ALA 123 LYS 124 SER 125 ILE 126 GLU 127 VAL 128 LEU 129 ARG 130 SER 131 ASN 132 GLY 133 TYR 134 THR 135 VAL 136 GLY 137 THR 138 ALA 139 LEU 140 VAL 141 LEU 142 VAL 143 ASP 144 ARG 145 GLY 146 GLU 147 GLY 148 ALA 149 GLY 150 GLU 151 LEU 152 LEU 153 ALA 154 ARG 155 MSE 156 GLY 157 VAL 158 ARG 159 LEU 160 VAL 161 SER 162 VAL 163 ALA 164 THR 165 LEU 166 LYS 167 THR 168 ILE 169 LEU 170 GLU 171 LYS 172 LEU 173 GLY 174 TRP 175 GLY 176 GLY 177
Unit 2	MSE 1 LEU 2 ALA 3 LYS 4 VAL 5 LEU 6 LYS 7 LYS 8 ARG 9 GLY 10 ALA 11 VAL 12 LEU 13 ARG 14 GLY 15 ASP 16 PHE 17 VAL 18 LEU 19 SER 20 SER 21 GLY 22 ARG 23 ARG 24 SER 25 SER 26 VAL 27 TYR 28 ILE 29 ASP 30 MSE 31 ARG 32 ARG 33 LEU 34 LEU 35 GLY 36 ASP 37 GLU 38 SER 39 SER 40 TYR 41 SER 42 VAL 43 ALA 44 LEU 45 ASP 46 LEU 47 LEU 48 LEU 49 GLU 50 VAL 51 GLY 52 GLY 53 GLN 54 ASP 55 LEU 56 ALA 57 ARG 58 SER 59 SER 60 ALA 61 VAL 62 ILE 63 GLY 64 VAL 65 ALA 66 THR 67 GLY 68 GLY 69 LEU 70 PRO 71 TRP 72 ALA 73 ALA 74 MSE 75 LEU 76 ALA 77 LEU 78 ARG 79 LEU 80 SER 81 LYS 82 PRO 83 LEU 84 GLY 85 TYR 86 VAL 87 ARG 88 PRO 89 SER 98 GLN 99 VAL 100 GLU 101 GLY 102 ASP 103 PRO 104 PRO 105 LYS 106 GLY 107 ARG 108 VAL 109 VAL 110 VAL 111 VAL 112 ASP 113 ASP 114 VAL 115 ALA 116 THR 117 THR 118 GLY 119 THR 120 SER 121 ILE 122 ALA 123 LYS 124 SER 125 ILE 126 GLU 127 VAL 128 LEU 129 ARG 130 SER 131 ASN 132 GLY 133 TYR 134 THR 135 VAL 136 GLY 137 THR 138 ALA 139 LEU 140 VAL 141 LEU 142 VAL 143 ASP 144 ARG 145 GLY 146 GLU 147 GLY 148 ALA 149 GLY 150 GLU 151 LEU 152 LEU 153 ALA 154 ARG 155 MSE 156 GLY 157 VAL 158 ARG 159 LEU 160 VAL 161 SER 162 VAL 163 ALA 164 THR 165 LEU 166 LYS 167 THR 168 ILE 169 LEU 170 GLU 171 LYS 172 LEU 173 GLY 174 TRP 175
Unit 3	MSE 1 LEU 2 ALA 3 LYS 4 VAL 5 LEU 6 LYS 7 LYS 8 ARG 9 GLY 10 ALA 11 VAL 12 LEU 13 ARG 14 GLY 15 ASP 16 PHE 17 VAL 18 LEU 19 SER 20 SER 21 GLY 22 ARG 23 ARG 24 SER 25 SER 26 VAL 27 TYR 28 ILE 29 ASP 30 MSE 31 ARG 32 ARG 33 LEU 34 LEU 35 GLY 36 ASP 37 GLU 38 SER 39 SER 40 TYR 41 SER 42 VAL 43 ALA 44 LEU 45 ASP 46 LEU 47 LEU 48 LEU 49 GLU 50 VAL 51 GLY 52 GLY 53 GLN 54 ASP 55 LEU 56 ALA 57 ARG 58 SER 59 SER 60 ALA 61 VAL 62 ILE 63 GLY 64 VAL 65 ALA 66 THR 67 GLY 68 GLY 69 LEU 70 PRO 71 TRP 72 ALA 73 ALA 74 MSE 75 LEU 76 ALA 77 LEU 78 ARG 79 LEU 80 SER 81 LYS 82 PRO 83 LEU 84 GLY 85 TYR 86 VAL 87 ARG 88 SER 98 GLN 99 VAL 100 GLU 101 GLY 102 ASP 103 PRO 104 PRO 105 LYS 106 GLY 107 ARG 108 VAL 109 VAL 110 VAL 111 VAL 112 ASP 113 ASP 114 VAL 115 ALA 116 THR 117 THR 118 GLY 119 THR 120 SER 121 ILE 122 ALA 123 LYS 124 SER 125 ILE 126 GLU 127 VAL 128 LEU 129 ARG 130 SER 131 ASN 132 GLY 133 TYR 134 THR 135 VAL 136 GLY 137 THR 138 ALA 139 LEU 140 VAL 141 LEU 142 VAL 143 ASP 144 ARG 145 GLY 146 GLU 147 GLY 148 ALA 149 GLY 150 GLU 151 LEU 152 LEU 153 ALA 154 ARG 155 MSE 156 GLY 157 VAL 158 ARG 159 LEU 160 VAL 161 SER 162 VAL 163 ALA 164 THR 165 LEU 166 LYS 167 THR 168 ILE 169 LEU 170 GLU 171 LYS 172 LEU 173 GLY 174 TRP 175
Unit 4	MSE 1 LEU 2 ALA 3 LYS 4 VAL 5 LEU 6 LYS 7 LYS 8 ARG 9 GLY 10 ALA 11 VAL 12 LEU 13 ARG 14 GLY 15 ASP 16 PHE 17 VAL 18 LEU 19 SER 20 SER 21 GLY 22 ARG 23 ARG 24 SER 25 SER 26 VAL 27 TYR 28 ILE 29 ASP 30 MSE 31 ARG 32 ARG 33 LEU 34 LEU 35 GLY 36 ASP 37 GLU 38 SER 39 SER 40 TYR 41 SER 42 VAL 43 ALA 44 LEU 45 ASP 46 LEU 47 LEU 48 LEU 49 GLU 50 VAL 51 GLY 52 GLY 53 GLN 54 ASP 55 LEU 56 ALA 57 ARG 58 SER 59 SER 60 ALA 61 VAL 62 ILE 63 GLY 64 VAL 65 ALA 66 THR 67 GLY 68 GLY 69 LEU 70 PRO 71 TRP 72 ALA 73 ALA 74 MSE 75 LEU 76 ALA 77 LEU 78 ARG 79 LEU 80 SER 81 LYS 82 PRO 83 LEU 84 GLY 85 TYR 86 VAL 87 ARG 88 PRO 89 GLU 90 ARG 91 LYS 92 GLY 93 HIS 94 GLY 95 THR 96 LEU 97 SER 98 GLN 99 VAL 100 GLU 101 GLY 102 ASP 103 PRO 104 PRO 105 LYS 106 GLY 107 ARG 108 VAL 109 VAL 110 VAL 111 VAL 112 ASP 113 ASP 114 VAL 115 ALA 116 THR 117 THR 118 GLY 119 THR 120 SER 121 ILE 122 ALA 123 LYS 124 SER 125 ILE 126 GLU 127 VAL 128 LEU 129 ARG 130 SER 131 ASN 132 GLY 133 TYR 134 THR 135 VAL 136 GLY 137 THR 138 ALA 139 LEU 140 VAL 141 LEU 142 VAL 143 ASP 144 ARG 145 GLY 146 GLU 147 GLY 148 ALA 149 GLY 150 GLU 151 LEU 152 LEU 153 ALA 154 ARG 155 MSE 156 GLY 157 VAL 158 ARG 159 LEU 160 VAL 161 SER 162 VAL 163 ALA 164 THR 165 LEU 166 LYS 167 THR 168 ILE 169 LEU 170 GLU 171 LYS 172 LEU 173 GLY 174 TRP 175 GLY 176 GLY 177

Ligands

Unit 5	PO4 646
Unit 6	PO4 647