2YXU - Sequence, Chains, Asymmetric and Biological Units

• Title: HUMAN PYRIDOXAL KINASE
• Keywords: BETA SHEET WITH ALPHA HELIX, ATP COMPLEX, METAL ION, TRANSFE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2YXU	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRIDOXAL KINASE	A	306	2414	0
2	Protein	PYRIDOXAL KINASE	B	307	2428	0
3	Ligand	PYRIDOXAL KINASE	A	8	0	67
4	Ligand	PYRIDOXAL KINASE	B	15	0	120
5	Water			474	0	474
total				1110	4842	661

Proteins

Unit 1

GLU 3 GLU 4 CYS 5 ARG 6 VAL 7 LEU 8 SER 9 ILE 10 GLN 11 SER 12 HIS 13 VAL 14 ILE 15 ARG 16 GLY 17 TYR 18 VAL 19 GLY 20 ASN 21 ARG 22 ALA 23 ALA 24 THR 25 PHE 26 PRO 27 LEU 28 GLN 29 VAL 30 LEU 31 GLY 32 PHE 33 GLU 34 ILE 35 ASP 36 ALA 37 VAL 38 ASN 39 SER 40 VAL 41 GLN 42 PHE 43 SER 44 ASN 45 HIS 46 THR 47 GLY 48 TYR 49 ALA 50 HIS 51 TRP 52 LYS 53 GLY 54 GLN 55 VAL 56 LEU 57 ASN 58 SER 59 ASP 60 GLU 61 LEU 62 GLN 63 GLU 64 LEU 65 TYR 66 GLU 67 GLY 68 LEU 69 ARG 70 LEU 71 ASN 72 ASN 73 MET 74 ASN 75 LYS 76 TYR 77 ASP 78 TYR 79 VAL 80 LEU 81 THR 82 GLY 83 TYR 84 THR 85 ARG 86 ASP 87 LYS 88 SER 89 PHE 90 LEU 91 ALA 92 MET 93 VAL 94 VAL 95 ASP 96 ILE 97 VAL 98 GLN 99 GLU 100 LEU 101 LYS 102 GLN 103 GLN 104 ASN 105 PRO 106 ARG 107 LEU 108 VAL 109 TYR 110 VAL 111 CYS 112 ASP 113 PRO 114 VAL 115 LEU 116 GLY 117 ASP 118 LYS 119 TRP 120 ASP 121 GLY 122 GLU 123 GLY 124 SER 125 MET 126 TYR 127 VAL 128 PRO 129 GLU 130 ASP 131 LEU 132 LEU 133 PRO 134 VAL 135 TYR 136 LYS 137 GLU 138 LYS 139 VAL 140 VAL 141 PRO 142 LEU 143 ALA 144 ASP 145 ILE 146 ILE 147 THR 148 PRO 149 ASN 150 GLN 151 PHE 152 GLU 153 ALA 154 GLU 155 LEU 156 LEU 157 SER 158 GLY 159 ARG 160 LYS 161 ILE 162 HIS 163 SER 164 GLN 165 GLU 166 GLU 167 ALA 168 LEU 169 ARG 170 VAL 171 MET 172 ASP 173 MET 174 LEU 175 HIS 176 SER 177 MET 178 GLY 179 PRO 180 ASP 181 THR 182 VAL 183 VAL 184 ILE 185 THR 186 SER 187 SER 188 ASP 189 LEU 190 PRO 191 SER 192 PRO 193 GLN 194 GLY 195 SER 196 ASN 197 TYR 198 LEU 199 ILE 200 VAL 201 LEU 202 GLY 203 SER 204 GLN 205 ARG 206 ARG 207 GLY 212 SER 213 VAL 214 VAL 215 MET 216 GLU 217 ARG 218 ILE 219 ARG 220 MET 221 ASP 222 ILE 223 ARG 224 LYS 225 VAL 226 ASP 227 ALA 228 VAL 229 PHE 230 VAL 231 GLY 232 THR 233 GLY 234 ASP 235 LEU 236 PHE 237 ALA 238 ALA 239 MET 240 LEU 241 LEU 242 ALA 243 TRP 244 THR 245 HIS 246 LYS 247 HIS 248 PRO 249 ASN 250 ASN 251 LEU 252 LYS 253 VAL 254 ALA 255 CYS 256 GLU 257 LYS 258 THR 259 VAL 260 SER 261 THR 262 LEU 263 HIS 264 HIS 265 VAL 266 LEU 267 GLN 268 ARG 269 THR 270 ILE 271 GLN 272 CYS 273 ALA 274 LYS 275 ALA 276 GLN 277 ALA 278 GLY 279 GLU 280 GLY 281 VAL 282 ARG 283 PRO 284 SER 285 PRO 286 MET 287 GLN 288 LEU 289 GLU 290 LEU 291 ARG 292 MET 293 VAL 294 GLN 295 SER 296 LYS 297 ARG 298 ASP 299 ILE 300 GLU 301 ASP 302 PRO 303 GLU 304 ILE 305 VAL 306 VAL 307 GLN 308 ALA 309 THR 310 VAL 311 LEU 312

Unit 2

GLU 3 GLU 4 CYS 5 ARG 6 VAL 7 LEU 8 SER 9 ILE 10 GLN 11 SER 12 HIS 13 VAL 14 ILE 15 ARG 16 GLY 17 TYR 18 VAL 19 GLY 20 ASN 21 ARG 22 ALA 23 ALA 24 THR 25 PHE 26 PRO 27 LEU 28 GLN 29 VAL 30 LEU 31 GLY 32 PHE 33 GLU 34 ILE 35 ASP 36 ALA 37 VAL 38 ASN 39 SER 40 VAL 41 GLN 42 PHE 43 SER 44 ASN 45 HIS 46 THR 47 GLY 48 TYR 49 ALA 50 HIS 51 TRP 52 LYS 53 GLY 54 GLN 55 VAL 56 LEU 57 ASN 58 SER 59 ASP 60 GLU 61 LEU 62 GLN 63 GLU 64 LEU 65 TYR 66 GLU 67 GLY 68 LEU 69 ARG 70 LEU 71 ASN 72 ASN 73 MET 74 ASN 75 LYS 76 TYR 77 ASP 78 TYR 79 VAL 80 LEU 81 THR 82 GLY 83 TYR 84 THR 85 ARG 86 ASP 87 LYS 88 SER 89 PHE 90 LEU 91 ALA 92 MET 93 VAL 94 VAL 95 ASP 96 ILE 97 VAL 98 GLN 99 GLU 100 LEU 101 LYS 102 GLN 103 GLN 104 ASN 105 PRO 106 ARG 107 LEU 108 VAL 109 TYR 110 VAL 111 CYS 112 ASP 113 PRO 114 VAL 115 LEU 116 GLY 117 ASP 118 LYS 119 TRP 120 ASP 121 GLY 122 GLU 123 GLY 124 SER 125 MET 126 TYR 127 VAL 128 PRO 129 GLU 130 ASP 131 LEU 132 LEU 133 PRO 134 VAL 135 TYR 136 LYS 137 GLU 138 LYS 139 VAL 140 VAL 141 PRO 142 LEU 143 ALA 144 ASP 145 ILE 146 ILE 147 THR 148 PRO 149 ASN 150 GLN 151 PHE 152 GLU 153 ALA 154 GLU 155 LEU 156 LEU 157 SER 158 GLY 159 ARG 160 LYS 161 ILE 162 HIS 163 SER 164 GLN 165 GLU 166 GLU 167 ALA 168 LEU 169 ARG 170 VAL 171 MET 172 ASP 173 MET 174 LEU 175 HIS 176 SER 177 MET 178 GLY 179 PRO 180 ASP 181 THR 182 VAL 183 VAL 184 ILE 185 THR 186 SER 187 SER 188 ASP 189 LEU 190 PRO 191 SER 192 PRO 193 GLN 194 GLY 195 SER 196 ASN 197 TYR 198 LEU 199 ILE 200 VAL 201 LEU 202 GLY 203 SER 204 GLN 205 ARG 206 ARG 207 ARG 208 ASN 209 PRO 210 ALA 211 GLY 212 SER 213 VAL 214 VAL 215 MET 216 GLU 217 ARG 218 ILE 219 ARG 220 MET 221 ASP 222 ILE 223 ARG 224 LYS 225 VAL 226 ASP 227 ALA 228 VAL 229 PHE 230 VAL 231 GLY 232 THR 233 GLY 234 ASP 235 LEU 236 PHE 237 ALA 238 ALA 239 MET 240 LEU 241 LEU 242 ALA 243 TRP 244 THR 245 HIS 246 LYS 247 HIS 248 PRO 249 ASN 250 ASN 251 LEU 252 LYS 253 VAL 254 ALA 255 CYS 256 GLU 257 LYS 258 THR 259 VAL 260 SER 261 THR 262 LEU 263 HIS 264 HIS 265 VAL 266 LEU 267 GLN 268 ARG 269 THR 270 ILE 271 GLN 272 CYS 273 ALA 274 LYS 275 ALA 276 GLN 277 ALA 278 VAL 282 ARG 283 PRO 284 SER 285 PRO 286 MET 287 GLN 288 LEU 289 GLU 290 LEU 291 ARG 292 MET 293 VAL 294 GLN 295 SER 296 LYS 297 ARG 298 ASP 299 ILE 300 GLU 301 ASP 302 PRO 303 GLU 304 ILE 305 VAL 306 VAL 307 GLN 308 ALA 309 THR 310 VAL 311 LEU 312

Ligands

Unit 3	MPD 1011 MPD 1013 MPD 1037 MG 1404 NA 1406 ATP 1410 PO4 1501 PO4 1505
Unit 4	MPD 1015 MPD 1019 MPD 1021 MPD 1023 MPD 1025 MPD 1029 MPD 1031 MPD 1039 MPD 1041 PO4 1503 PO4 1517 PO4 1527 MG 2404 NA 2406 ATP 2410