Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIHYRODIPICOLINATE SYNTHASE (DAPA)
Keywords MJ0244, DIHYDRODIPICOLINATE SYNTHASE, TIM BETA/ALPHA-BARREL FOLD, STRUCTURAL GENOMICS, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AND FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2YXG     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDRODIPICOLINATE SYNTHASE  A 289 2216 0
2  Protein   DIHYDRODIPICOLINATE SYNTHASE  B 288 2211 0
3  Protein   DIHYDRODIPICOLINATE SYNTHASE  C 288 2211 0
4  Protein   DIHYDRODIPICOLINATE SYNTHASE  D 288 2211 0
5 Water     700 0 700
total       1853 8849 700
Proteins
Unit 1 MET1 PHE2 LYS3 GLY4 VAL5 TYR6 PRO7 ALA8 ILE9 ILE10 THR11 PRO12 PHE13 LYS14 ASN15 LYS16 GLU17 VAL18 ASP19 PHE20 ASP21 GLY22 LEU23 GLU24 GLU25 ASN26 ILE27 ASN28 PHE29 LEU30 ILE31 GLU32 ASN33 GLY34 VAL35 SER36 GLY37 ILE38 VAL39 ALA40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 SER51 HIS52 GLU53 GLU54 HIS55 LYS56 LYS57 VAL58 ILE59 GLU60 LYS61 VAL62 VAL63 ASP64 VAL65 VAL66 ASN67 GLY68 ARG69 VAL70 GLN71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 CYS80 THR81 GLU82 GLU83 ALA84 ILE85 GLU86 LEU87 SER88 VAL89 PHE90 ALA91 GLU92 ASP93 VAL94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 SER101 ILE102 THR103 PRO104 TYR105 TYR106 ASN107 LYS108 PRO109 THR110 GLN111 GLU112 GLY113 LEU114 ARG115 LYS116 HIS117 PHE118 GLY119 LYS120 VAL121 ALA122 GLU123 SER124 ILE125 ASN126 LEU127 PRO128 ILE129 VAL130 LEU131 TYR132 ASN133 VAL134 PRO135 SER136 ARG137 THR138 ALA139 VAL140 ASN141 LEU142 GLU143 PRO144 LYS145 THR146 VAL147 LYS148 LEU149 LEU150 ALA151 GLU152 GLU153 TYR154 SER155 ASN156 ILE157 SER158 ALA159 VAL160 LYS161 GLU162 ALA163 ASN164 PRO165 ASN166 LEU167 SER168 GLN169 VAL170 SER171 GLU172 LEU173 ILE174 HIS175 ASP176 ALA177 LYS178 ILE179 THR180 VAL181 LEU182 SER183 GLY184 ASN185 ASP186 GLU187 LEU188 THR189 LEU190 PRO191 ILE192 ILE193 ALA194 LEU195 GLY196 GLY197 LYS198 GLY199 VAL200 ILE201 SER202 VAL203 VAL204 ALA205 ASN206 ILE207 VAL208 PRO209 LYS210 GLU211 PHE212 VAL213 GLU214 MET215 VAL216 ASN217 TYR218 ALA219 LEU220 GLU221 GLY222 ASP223 PHE224 GLU225 LYS226 ALA227 ARG228 GLU229 ILE230 HIS231 TYR232 LYS233 LEU234 PHE235 PRO236 LEU237 MET238 LYS239 ALA240 MET241 PHE242 ILE243 GLU244 THR245 ASN246 PRO247 ILE248 PRO249 VAL250 LYS251 THR252 ALA253 LEU254 ASN255 MET256 MET257 GLY258 ARG259 PRO260 ALA261 GLY262 GLU263 LEU264 ARG265 LEU266 PRO267 LEU268 CYS269 GLU270 MET271 SER272 GLU273 GLU274 HIS275 LYS276 LYS277 ILE278 LEU279 GLU280 ASN281 VAL282 LEU283 LYS284 ASP285 LEU286 GLY287 LEU288 ILE289
Unit 2 PHE2 LYS3 GLY4 VAL5 TYR6 PRO7 ALA8 ILE9 ILE10 THR11 PRO12 PHE13 LYS14 ASN15 LYS16 GLU17 VAL18 ASP19 PHE20 ASP21 GLY22 LEU23 GLU24 GLU25 ASN26 ILE27 ASN28 PHE29 LEU30 ILE31 GLU32 ASN33 GLY34 VAL35 SER36 GLY37 ILE38 VAL39 ALA40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 SER51 HIS52 GLU53 GLU54 HIS55 LYS56 LYS57 VAL58 ILE59 GLU60 LYS61 VAL62 VAL63 ASP64 VAL65 VAL66 ASN67 GLY68 ARG69 VAL70 GLN71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 CYS80 THR81 GLU82 GLU83 ALA84 ILE85 GLU86 LEU87 SER88 VAL89 PHE90 ALA91 GLU92 ASP93 VAL94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 SER101 ILE102 THR103 PRO104 TYR105 TYR106 ASN107 LYS108 PRO109 THR110 GLN111 GLU112 GLY113 LEU114 ARG115 LYS116 HIS117 PHE118 GLY119 LYS120 VAL121 ALA122 GLU123 SER124 ILE125 ASN126 LEU127 PRO128 ILE129 VAL130 LEU131 TYR132 ASN133 VAL134 PRO135 SER136 ARG137 THR138 ALA139 VAL140 ASN141 LEU142 GLU143 PRO144 LYS145 THR146 VAL147 LYS148 LEU149 LEU150 ALA151 GLU152 GLU153 TYR154 SER155 ASN156 ILE157 SER158 ALA159 VAL160 LYS161 GLU162 ALA163 ASN164 PRO165 ASN166 LEU167 SER168 GLN169 VAL170 SER171 GLU172 LEU173 ILE174 HIS175 ASP176 ALA177 LYS178 ILE179 THR180 VAL181 LEU182 SER183 GLY184 ASN185 ASP186 GLU187 LEU188 THR189 LEU190 PRO191 ILE192 ILE193 ALA194 LEU195 GLY196 GLY197 LYS198 GLY199 VAL200 ILE201 SER202 VAL203 VAL204 ALA205 ASN206 ILE207 VAL208 PRO209 LYS210 GLU211 PHE212 VAL213 GLU214 MET215 VAL216 ASN217 TYR218 ALA219 LEU220 GLU221 GLY222 ASP223 PHE224 GLU225 LYS226 ALA227 ARG228 GLU229 ILE230 HIS231 TYR232 LYS233 LEU234 PHE235 PRO236 LEU237 MET238 LYS239 ALA240 MET241 PHE242 ILE243 GLU244 THR245 ASN246 PRO247 ILE248 PRO249 VAL250 LYS251 THR252 ALA253 LEU254 ASN255 MET256 MET257 GLY258 ARG259 PRO260 ALA261 GLY262 GLU263 LEU264 ARG265 LEU266 PRO267 LEU268 CYS269 GLU270 MET271 SER272 GLU273 GLU274 HIS275 LYS276 LYS277 ILE278 LEU279 GLU280 ASN281 VAL282 LEU283 LYS284 ASP285 LEU286 GLY287 LEU288 ILE289
Unit 3 PHE2 LYS3 GLY4 VAL5 TYR6 PRO7 ALA8 ILE9 ILE10 THR11 PRO12 PHE13 LYS14 ASN15 LYS16 GLU17 VAL18 ASP19 PHE20 ASP21 GLY22 LEU23 GLU24 GLU25 ASN26 ILE27 ASN28 PHE29 LEU30 ILE31 GLU32 ASN33 GLY34 VAL35 SER36 GLY37 ILE38 VAL39 ALA40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 SER51 HIS52 GLU53 GLU54 HIS55 LYS56 LYS57 VAL58 ILE59 GLU60 LYS61 VAL62 VAL63 ASP64 VAL65 VAL66 ASN67 GLY68 ARG69 VAL70 GLN71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 CYS80 THR81 GLU82 GLU83 ALA84 ILE85 GLU86 LEU87 SER88 VAL89 PHE90 ALA91 GLU92 ASP93 VAL94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 SER101 ILE102 THR103 PRO104 TYR105 TYR106 ASN107 LYS108 PRO109 THR110 GLN111 GLU112 GLY113 LEU114 ARG115 LYS116 HIS117 PHE118 GLY119 LYS120 VAL121 ALA122 GLU123 SER124 ILE125 ASN126 LEU127 PRO128 ILE129 VAL130 LEU131 TYR132 ASN133 VAL134 PRO135 SER136 ARG137 THR138 ALA139 VAL140 ASN141 LEU142 GLU143 PRO144 LYS145 THR146 VAL147 LYS148 LEU149 LEU150 ALA151 GLU152 GLU153 TYR154 SER155 ASN156 ILE157 SER158 ALA159 VAL160 LYS161 GLU162 ALA163 ASN164 PRO165 ASN166 LEU167 SER168 GLN169 VAL170 SER171 GLU172 LEU173 ILE174 HIS175 ASP176 ALA177 LYS178 ILE179 THR180 VAL181 LEU182 SER183 GLY184 ASN185 ASP186 GLU187 LEU188 THR189 LEU190 PRO191 ILE192 ILE193 ALA194 LEU195 GLY196 GLY197 LYS198 GLY199 VAL200 ILE201 SER202 VAL203 VAL204 ALA205 ASN206 ILE207 VAL208 PRO209 LYS210 GLU211 PHE212 VAL213 GLU214 MET215 VAL216 ASN217 TYR218 ALA219 LEU220 GLU221 GLY222 ASP223 PHE224 GLU225 LYS226 ALA227 ARG228 GLU229 ILE230 HIS231 TYR232 LYS233 LEU234 PHE235 PRO236 LEU237 MET238 LYS239 ALA240 MET241 PHE242 ILE243 GLU244 THR245 ASN246 PRO247 ILE248 PRO249 VAL250 LYS251 THR252 ALA253 LEU254 ASN255 MET256 MET257 GLY258 ARG259 PRO260 ALA261 GLY262 GLU263 LEU264 ARG265 LEU266 PRO267 LEU268 CYS269 GLU270 MET271 SER272 GLU273 GLU274 HIS275 LYS276 LYS277 ILE278 LEU279 GLU280 ASN281 VAL282 LEU283 LYS284 ASP285 LEU286 GLY287 LEU288 ILE289
Unit 4 PHE2 LYS3 GLY4 VAL5 TYR6 PRO7 ALA8 ILE9 ILE10 THR11 PRO12 PHE13 LYS14 ASN15 LYS16 GLU17 VAL18 ASP19 PHE20 ASP21 GLY22 LEU23 GLU24 GLU25 ASN26 ILE27 ASN28 PHE29 LEU30 ILE31 GLU32 ASN33 GLY34 VAL35 SER36 GLY37 ILE38 VAL39 ALA40 VAL41 GLY42 THR43 THR44 GLY45 GLU46 SER47 PRO48 THR49 LEU50 SER51 HIS52 GLU53 GLU54 HIS55 LYS56 LYS57 VAL58 ILE59 GLU60 LYS61 VAL62 VAL63 ASP64 VAL65 VAL66 ASN67 GLY68 ARG69 VAL70 GLN71 VAL72 ILE73 ALA74 GLY75 ALA76 GLY77 SER78 ASN79 CYS80 THR81 GLU82 GLU83 ALA84 ILE85 GLU86 LEU87 SER88 VAL89 PHE90 ALA91 GLU92 ASP93 VAL94 GLY95 ALA96 ASP97 ALA98 VAL99 LEU100 SER101 ILE102 THR103 PRO104 TYR105 TYR106 ASN107 LYS108 PRO109 THR110 GLN111 GLU112 GLY113 LEU114 ARG115 LYS116 HIS117 PHE118 GLY119 LYS120 VAL121 ALA122 GLU123 SER124 ILE125 ASN126 LEU127 PRO128 ILE129 VAL130 LEU131 TYR132 ASN133 VAL134 PRO135 SER136 ARG137 THR138 ALA139 VAL140 ASN141 LEU142 GLU143 PRO144 LYS145 THR146 VAL147 LYS148 LEU149 LEU150 ALA151 GLU152 GLU153 TYR154 SER155 ASN156 ILE157 SER158 ALA159 VAL160 LYS161 GLU162 ALA163 ASN164 PRO165 ASN166 LEU167 SER168 GLN169 VAL170 SER171 GLU172 LEU173 ILE174 HIS175 ASP176 ALA177 LYS178 ILE179 THR180 VAL181 LEU182 SER183 GLY184 ASN185 ASP186 GLU187 LEU188 THR189 LEU190 PRO191 ILE192 ILE193 ALA194 LEU195 GLY196 GLY197 LYS198 GLY199 VAL200 ILE201 SER202 VAL203 VAL204 ALA205 ASN206 ILE207 VAL208 PRO209 LYS210 GLU211 PHE212 VAL213 GLU214 MET215 VAL216 ASN217 TYR218 ALA219 LEU220 GLU221 GLY222 ASP223 PHE224 GLU225 LYS226 ALA227 ARG228 GLU229 ILE230 HIS231 TYR232 LYS233 LEU234 PHE235 PRO236 LEU237 MET238 LYS239 ALA240 MET241 PHE242 ILE243 GLU244 THR245 ASN246 PRO247 ILE248 PRO249 VAL250 LYS251 THR252 ALA253 LEU254 ASN255 MET256 MET257 GLY258 ARG259 PRO260 ALA261 GLY262 GLU263 LEU264 ARG265 LEU266 PRO267 LEU268 CYS269 GLU270 MET271 SER272 GLU273 GLU274 HIS275 LYS276 LYS277 ILE278 LEU279 GLU280 ASN281 VAL282 LEU283 LYS284 ASP285 LEU286 GLY287 LEU288 ILE289
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany