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Sequence, Chains, Asymmetric and Biological Units

Title THE X-RAY CRYSTAL STRUCTURE OF TANDEM CBM51 MODULES OF SP3GH FAMILY 98 GLYCOSIDE HYDROLASE FROM STREPTOCOCCUS PNEUMONIAE IN COMPLEX WITH THE BLOOD GROUP B ANTIGEN
Keywords HYDROLASE, CARBOHYDRATE-BINDING MODULE, BLOOD GROUP ANTIGEN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2YGM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 351 2706 0
2  Protein    B 352 2712 0
3  Ligand    C 4 0 47
4  Ligand    D 4 0 47
5  Ligand    A 2 0 2
6  Ligand    B 2 0 2
7 Water     175 0 175
total       890 5418 273
Proteins
Unit 1 HIS62 MET63 ALA64 SER65 THR66 TYR67 LEU68 SER69 ASP70 MET71 ASP72 TRP73 SER74 SER75 ALA76 THR77 HIS78 GLY79 ASP80 ILE81 ASP82 LYS83 THR84 LYS85 THR86 VAL87 GLN88 LYS89 ASP90 ALA91 PRO92 PHE93 THR94 THR95 GLY96 ASN97 LYS98 GLY99 GLU100 HIS101 THR102 LYS103 ILE104 SER105 LEU106 LEU107 THR108 SER109 ASP110 ASP111 LYS112 VAL113 LYS114 TYR115 PHE116 ASP117 LYS118 GLY119 ILE120 GLY121 THR122 VAL123 ALA124 ASP125 SER126 PRO127 SER128 VAL129 ILE130 SER131 TYR132 ASP133 ILE134 SER135 GLY136 GLN137 GLY138 PHE139 GLU140 LYS141 PHE142 GLU143 THR144 TYR145 ILE146 GLY147 ILE148 ASP149 GLN150 SER151 ALA152 ASN153 SER154 SER155 ARG156 SER157 ASP158 HIS159 ALA160 VAL161 VAL162 ASP163 ARG164 ILE165 GLU166 ILE167 GLU168 ILE169 ASP170 GLY171 LYS172 VAL173 VAL174 TYR175 SER176 SER177 SER178 VAL179 THR180 ASN181 PRO182 GLU183 GLY184 PHE185 ARG186 TYR187 ASN188 THR189 GLN190 ALA191 GLN192 PHE193 ILE194 SER195 VAL196 THR197 ILE198 PRO199 GLN200 ASN201 ALA202 LYS203 LYS204 ILE205 SER206 LEU207 LYS208 SER209 PHE210 ALA211 GLY212 GLU213 HIS214 THR215 TRP216 GLY217 ASP218 GLU219 VAL220 VAL221 PHE222 ALA223 ASP224 ALA225 LYS226 LEU227 ILE228 LYS229 THR230 VAL231 SER232 THR233 GLN234 THR235 ILE236 THR237 PRO238 ASP239 LEU240 LEU241 ASN242 LYS243 GLY244 ILE245 ASN246 GLY247 GLY248 VAL249 TYR250 LEU251 SER252 ASP253 LEU254 GLU255 TRP256 VAL257 ASP258 ALA259 THR260 HIS261 GLY262 ASP263 ASP264 ASP265 LYS266 SER267 LYS268 THR269 VAL270 GLN271 LYS272 ASP273 LYS274 PRO275 PHE276 THR277 PRO278 GLY279 ASN280 ASN281 GLY282 SER283 ASN284 ASN285 LYS286 ILE287 LYS288 LEU289 LEU290 ILE291 ASP292 GLY293 LYS294 GLU295 VAL296 GLU297 PHE298 ASN299 LYS300 GLY301 LEU302 GLY303 THR304 VAL305 ALA306 SER307 ASN308 PRO309 SER310 SER311 ILE312 LYS313 TYR314 ASP315 VAL316 SER317 GLY318 ALA319 ASN320 VAL321 THR322 ARG323 PHE324 ILE325 SER326 TYR327 VAL328 GLY329 ILE330 ASP331 ARG332 SER333 ALA334 ASN335 HIS336 LEU337 ASN338 SER339 ASP340 TYR341 ALA342 ASP343 ILE344 GLN345 LYS346 PHE347 GLU348 VAL349 VAL350 ALA351 ASP352 GLY353 LYS354 VAL355 ILE356 TYR357 SER358 SER359 ASP360 SER361 LYS362 TYR363 PRO364 LYS365 GLY366 ILE367 LYS368 TYR369 ASP370 THR371 SER372 ALA373 PHE374 LEU375 VAL376 ASP377 VAL378 GLU379 ILE380 PRO381 LYS382 ASP383 THR384 GLN385 THR386 ILE387 GLU388 LEU389 LYS390 SER391 TYR392 SER393 GLY394 LYS395 HIS396 THR397 TRP398 ALA399 ASP400 GLU401 LEU402 VAL403 LEU404 GLY405 GLY406 ALA407 LEU408 PHE409 MET410 ALA411 ASN412
Unit 2 SER61 HIS62 MET63 ALA64 SER65 THR66 TYR67 LEU68 SER69 ASP70 MET71 ASP72 TRP73 SER74 SER75 ALA76 THR77 HIS78 GLY79 ASP80 ILE81 ASP82 LYS83 THR84 LYS85 THR86 VAL87 GLN88 LYS89 ASP90 ALA91 PRO92 PHE93 THR94 THR95 GLY96 ASN97 LYS98 GLY99 GLU100 HIS101 THR102 LYS103 ILE104 SER105 LEU106 LEU107 THR108 SER109 ASP110 ASP111 LYS112 VAL113 LYS114 TYR115 PHE116 ASP117 LYS118 GLY119 ILE120 GLY121 THR122 VAL123 ALA124 ASP125 SER126 PRO127 SER128 VAL129 ILE130 SER131 TYR132 ASP133 ILE134 SER135 GLY136 GLN137 GLY138 PHE139 GLU140 LYS141 PHE142 GLU143 THR144 TYR145 ILE146 GLY147 ILE148 ASP149 GLN150 SER151 ALA152 ASN153 SER154 SER155 ARG156 SER157 ASP158 HIS159 ALA160 VAL161 VAL162 ASP163 ARG164 ILE165 GLU166 ILE167 GLU168 ILE169 ASP170 GLY171 LYS172 VAL173 VAL174 TYR175 SER176 SER177 SER178 VAL179 THR180 ASN181 PRO182 GLU183 GLY184 PHE185 ARG186 TYR187 ASN188 THR189 GLN190 ALA191 GLN192 PHE193 ILE194 SER195 VAL196 THR197 ILE198 PRO199 GLN200 ASN201 ALA202 LYS203 LYS204 ILE205 SER206 LEU207 LYS208 SER209 PHE210 ALA211 GLY212 GLU213 HIS214 THR215 TRP216 GLY217 ASP218 GLU219 VAL220 VAL221 PHE222 ALA223 ASP224 ALA225 LYS226 LEU227 ILE228 LYS229 THR230 VAL231 SER232 THR233 GLN234 THR235 ILE236 THR237 PRO238 ASP239 LEU240 LEU241 ASN242 LYS243 GLY244 ILE245 ASN246 GLY247 GLY248 VAL249 TYR250 LEU251 SER252 ASP253 LEU254 GLU255 TRP256 VAL257 ASP258 ALA259 THR260 HIS261 GLY262 ASP263 ASP264 ASP265 LYS266 SER267 LYS268 THR269 VAL270 GLN271 LYS272 ASP273 LYS274 PRO275 PHE276 THR277 PRO278 GLY279 ASN280 ASN281 GLY282 SER283 ASN284 ASN285 LYS286 ILE287 LYS288 LEU289 LEU290 ILE291 ASP292 GLY293 LYS294 GLU295 VAL296 GLU297 PHE298 ASN299 LYS300 GLY301 LEU302 GLY303 THR304 VAL305 ALA306 SER307 ASN308 PRO309 SER310 SER311 ILE312 LYS313 TYR314 ASP315 VAL316 SER317 GLY318 ALA319 ASN320 VAL321 THR322 ARG323 PHE324 ILE325 SER326 TYR327 VAL328 GLY329 ILE330 ASP331 ARG332 SER333 ALA334 ASN335 HIS336 LEU337 ASN338 SER339 ASP340 TYR341 ALA342 ASP343 ILE344 GLN345 LYS346 PHE347 GLU348 VAL349 VAL350 ALA351 ASP352 GLY353 LYS354 VAL355 ILE356 TYR357 SER358 SER359 ASP360 SER361 LYS362 TYR363 PRO364 LYS365 GLY366 ILE367 LYS368 TYR369 ASP370 THR371 SER372 ALA373 PHE374 LEU375 VAL376 ASP377 VAL378 GLU379 ILE380 PRO381 LYS382 ASP383 THR384 GLN385 THR386 ILE387 GLU388 LEU389 LYS390 SER391 TYR392 SER393 GLY394 LYS395 HIS396 THR397 TRP398 ALA399 ASP400 GLU401 LEU402 VAL403 LEU404 GLY405 GLY406 ALA407 LEU408 PHE409 MET410 ALA411 ASN412
Ligands
Unit 3 NAG1 GAL2 FUC3 GLA4
Unit 4 NAG1 GAL2 FUC3 GLA4
Unit 5 CA505 NA506
Unit 6 NA505 CA506
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany