2YG2 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF APOLIOPROTEIN M IN COMPLEX WITH SPHINGOSINE 1-P
• Keywords: LIPID TRANSPORT, LIPOCALIN, HDL
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2YG2	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	APOLIPOPROTEIN M	A	163	1265	0
2	Protein	APOLIPOPROTEIN M	B	151	1182	0
3	Ligand	APOLIPOPROTEIN M	A	2	0	38
4	Ligand	APOLIPOPROTEIN M	B	1	0	25
5	Water			200	0	200
total				517	2447	263

Proteins

Unit 1

CYS 23 PRO 24 SER 27 GLN 28 LEU 29 THR 30 THR 31 LEU 32 GLY 33 VAL 34 ASP 35 GLY 36 GLU 38 PHE 39 PRO 40 GLU 41 VAL 42 HIS 43 LEU 44 GLY 45 GLN 46 TRP 47 TYR 48 PHE 49 ILE 50 ALA 51 GLY 52 ALA 53 ALA 54 PRO 55 THR 56 LYS 57 GLU 58 GLU 59 LEU 60 ALA 61 THR 62 PHE 63 ASP 64 PRO 65 VAL 66 ASP 67 ASN 68 ILE 69 VAL 70 PHE 71 ASN 72 MET 73 ALA 74 ALA 75 GLY 76 SER 77 ALA 78 PRO 79 MET 80 GLN 81 LEU 82 HIS 83 LEU 84 ARG 85 ALA 86 THR 87 ILE 88 ARG 89 MET 90 LYS 91 ASP 92 GLY 93 LEU 94 CYS 95 VAL 96 PRO 97 ARG 98 LYS 99 TRP 100 ILE 101 TYR 102 HIS 103 LEU 104 THR 105 GLU 106 GLY 107 SER 108 THR 109 ASP 110 LEU 111 ARG 112 THR 113 GLU 114 GLY 115 ARG 116 PRO 117 ASP 118 MET 119 LYS 120 THR 121 GLU 122 LEU 123 PHE 124 SER 125 SER 126 SER 127 CYS 128 PRO 129 GLY 130 GLY 131 ILE 132 MET 133 LEU 134 ASN 135 GLU 136 THR 137 GLY 138 GLN 139 GLY 140 TYR 141 GLN 142 ARG 143 PHE 144 LEU 145 LEU 146 TYR 147 ASN 148 ARG 149 SER 150 PRO 151 HIS 152 PRO 153 PRO 154 GLU 155 LYS 156 CYS 157 VAL 158 GLU 159 GLU 160 PHE 161 LYS 162 SER 163 LEU 164 THR 165 SER 166 CYS 167 LEU 168 ASP 169 SER 170 LYS 171 ALA 172 PHE 173 LEU 174 LEU 175 THR 176 PRO 177 ARG 178 ASN 179 GLN 180 GLU 181 ALA 182 CYS 183 GLU 184 LEU 185 SER 186 ASN 187 ASN 188

Unit 2

LEU 29 THR 30 THR 31 LEU 32 GLY 33 VAL 34 GLU 38 PHE 39 PRO 40 GLU 41 VAL 42 HIS 43 LEU 44 GLY 45 GLN 46 TRP 47 TYR 48 PHE 49 ILE 50 ALA 51 GLY 52 ALA 53 ALA 54 PRO 55 THR 56 LYS 57 GLU 58 GLU 59 LEU 60 ALA 61 THR 62 PHE 63 ASP 64 PRO 65 VAL 66 ASP 67 ASN 68 ILE 69 VAL 70 PHE 71 ASN 72 MET 73 ALA 74 ALA 75 PRO 79 MET 80 GLN 81 LEU 82 HIS 83 LEU 84 ARG 85 ALA 86 THR 87 ILE 88 ARG 89 MET 90 LYS 91 ASP 92 GLY 93 LEU 94 CYS 95 VAL 96 PRO 97 ARG 98 LYS 99 TRP 100 ILE 101 TYR 102 HIS 103 LEU 104 THR 105 GLU 106 GLY 107 SER 108 THR 109 ASP 110 LEU 111 ARG 112 THR 113 GLU 114 GLY 115 ARG 116 PRO 117 ASP 118 MET 119 LYS 120 THR 121 GLU 122 LEU 123 PHE 124 SER 125 SER 126 SER 127 CYS 128 PRO 129 GLY 130 GLY 131 ILE 132 MET 133 LEU 134 ASN 135 GLU 136 THR 137 GLY 138 GLN 139 GLY 140 TYR 141 GLN 142 ARG 143 PHE 144 LEU 145 LEU 146 TYR 147 ASN 148 ARG 149 SER 150 PRO 151 HIS 152 PRO 153 PRO 154 GLU 155 LYS 156 CYS 157 VAL 158 GLU 159 GLU 160 PHE 161 LYS 162 SER 163 LEU 164 THR 165 SER 166 CYS 167 LEU 168 ASP 169 SER 170 LYS 171 ALA 172 PHE 173 LEU 174 LEU 175 THR 176 PRO 177 ARG 178 ASN 179 GLN 180 GLU 181 ALA 182 CYS 183 GLU 184 LEU 185

Ligands

Unit 3	S1P 301 FLC 401
Unit 4	S1P 301