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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE ARCHAEAL BETA-CASP PROTEIN WITH N-TERMINAL KH DOMAINS FROM METHANOTHERMOBACTER THERMAUTOTROPHICUS
Keywords HYDROLASE, BETA-CASP, RNASE, KH, METALLO-BETA-LACTAMASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2YCB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR  A 634 5111 0
2  Protein   CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR  B 635 5118 0
3  Ligand   CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR  A 7 0 19
4  Ligand   CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR  B 4 0 8
5 Water     29 0 29
total       1309 10229 56
Proteins
Unit 1 SER3 GLU4 MET5 LEU6 GLU7 GLU8 ILE9 LYS10 ARG11 THR12 ILE13 MET14 GLN15 ARG16 LEU17 PRO18 GLU19 ARG20 VAL21 GLN22 VAL23 ALA24 LYS25 VAL26 GLU27 PHE28 GLU29 GLY30 PRO31 GLU32 VAL33 VAL34 ILE35 TYR36 THR37 LYS38 ASN39 PRO40 GLU41 ILE42 ILE43 THR44 GLU45 ASN46 GLY47 ASN48 LEU49 ILE50 ARG51 ASP52 ILE53 ALA54 LYS55 ASP56 ILE57 ARG58 LYS59 ARG60 ILE61 ILE62 ILE63 ARG64 SER65 ASP66 ARG67 SER68 VAL69 LEU70 MET71 ASP72 PRO73 GLU74 LYS75 ALA76 ILE77 ARG78 LYS79 ILE80 HIS81 GLU82 ILE83 VAL84 PRO85 GLU86 GLU87 ALA88 LYS89 ILE90 THR91 ASN92 ILE93 SER94 PHE95 ASP96 ASP97 VAL98 THR99 CYS100 GLU101 VAL102 ILE103 ILE104 GLU105 ALA106 ARG107 LYS108 PRO109 GLY110 LEU111 VAL112 ILE113 GLY114 LYS115 TYR116 GLY117 SER118 THR119 SER120 ARG121 GLU122 ILE123 VAL124 LYS125 ASN126 THR127 GLY128 TRP129 ALA130 PRO131 LYS132 ILE133 LEU134 ARG135 THR136 PRO137 PRO138 ILE139 SER140 SER141 GLU142 ILE143 ILE144 GLU145 ARG146 ILE147 ARG148 ARG149 THR150 LEU151 ARG152 LYS153 ASN154 SER155 LYS156 GLU157 ARG158 LYS159 LYS160 ILE161 LEU162 GLN163 GLN164 LEU165 GLY166 ASN167 ARG168 ILE169 HIS170 GLN171 LYS172 PRO173 LYS174 TYR175 ASP176 ASN177 ASP178 TRP179 ALA180 ARG181 LEU182 THR183 ALA184 MET185 GLY186 GLY187 PHE188 ARG189 GLU190 VAL191 GLY192 ARG193 SER194 CYS195 LEU196 TYR197 LEU198 GLN199 THR200 PRO201 ASN202 SER203 ARG204 VAL205 LEU206 LEU207 ASP208 CYS209 GLY210 VAL211 ASN212 VAL213 ALA214 GLY215 GLY216 ASP217 ASP218 LYS219 ASN220 SER221 TYR222 PRO223 TYR224 LEU225 ASN226 VAL227 PRO228 GLU229 PHE230 THR231 LEU232 ASP233 SER234 LEU235 ASP236 ALA237 VAL238 ILE239 ILE240 THR241 HIS242 ALA243 HIS244 LEU245 ASP246 HIS247 SER248 GLY249 PHE250 LEU251 PRO252 TYR253 LEU254 TYR255 HIS256 TYR257 GLY258 TYR259 ASP260 GLY261 PRO262 VAL263 TYR264 CYS265 THR266 ALA267 PRO268 THR269 ARG270 ASP271 LEU272 MET273 THR274 LEU275 LEU276 GLN277 LEU278 ASP279 HIS280 ILE281 ASP282 ILE283 ALA284 HIS285 ARG286 GLU287 ASP288 GLU289 PRO290 LEU291 PRO292 PHE293 ASN294 VAL295 LYS296 HIS297 VAL298 LYS299 LYS300 SER301 VAL302 LYS303 HIS304 THR305 ILE306 THR307 LEU308 ASP309 TYR310 GLY311 GLU312 VAL313 THR314 ASP315 ILE316 ALA317 PRO318 ASP319 ILE320 ARG321 LEU322 THR323 LEU324 HIS325 ASN326 ALA327 GLY328 HIS329 ILE330 LEU331 GLY332 SER333 ALA334 MET335 ALA336 HIS337 LEU338 HIS339 ILE340 GLY341 ASP342 GLY343 GLN344 HIS345 ASN346 MET347 VAL348 TYR349 THR350 GLY351 ASP352 PHE353 LYS354 TYR355 GLU356 GLN357 SER358 ARG359 LEU360 LEU361 GLU362 ALA363 ALA364 ALA365 ASN366 ARG367 PHE368 PRO369 ARG370 ILE371 GLU372 THR373 LEU374 VAL375 MET376 GLU377 SER378 THR379 TYR380 GLY381 GLY382 HIS383 GLU384 ASP385 VAL386 GLN387 PRO388 SER389 ARG390 ASN391 ARG392 ALA393 GLU394 LYS395 GLU396 LEU397 VAL398 LYS399 THR400 ILE401 TYR402 SER403 THR404 LEU405 ARG406 ARG407 GLY408 GLY409 LYS410 ILE411 LEU412 ILE413 PRO414 VAL415 PHE416 ALA417 VAL418 GLY419 ARG420 ALA421 GLN422 GLU423 LEU424 MET425 ILE426 VAL427 LEU428 GLU429 GLU430 TYR431 ILE432 ARG433 THR434 GLY435 ILE436 ILE437 ASP438 GLU439 VAL440 PRO441 VAL442 TYR443 ILE444 ASP445 GLY446 MET447 ILE448 TRP449 GLU450 ALA451 ASN452 ALA453 ILE454 HIS455 THR456 ALA457 ARG458 PRO459 GLU460 TYR461 LEU462 SER463 LYS464 ASP465 LEU466 ARG467 ASP468 GLN469 ILE470 PHE471 HIS472 MET473 GLY474 HIS475 ASN476 PRO477 PHE478 ILE479 SER480 ASP481 ILE482 PHE483 HIS484 LYS485 VAL486 ASN487 GLY488 MET489 ASP490 GLU491 ARG492 ARG493 GLU494 ILE495 VAL496 GLU497 GLY498 GLU499 PRO500 SER501 ILE502 ILE503 LEU504 SER505 THR506 SER507 GLY508 MET509 LEU510 THR511 GLY512 GLY513 ASN514 SER515 LEU516 GLU517 TYR518 PHE519 LYS520 TRP521 LEU522 CYS523 GLU524 ASP525 PRO526 ASP527 ASN528 SER529 LEU530 VAL531 PHE532 VAL533 GLY534 TYR535 GLN536 ALA537 GLU538 GLY539 SER540 LEU541 GLY542 ARG543 ARG544 ILE545 GLN546 LYS547 GLY548 TRP549 LYS550 GLU551 ILE552 PRO553 LEU554 LYS555 ASP556 GLU557 ASP558 ASP559 LYS560 MET561 ARG562 VAL563 TYR564 ASN565 VAL566 ARG567 MET568 ASN569 ILE570 LYS571 THR572 ILE573 GLU574 GLY575 PHE576 SER577 GLY578 HIS579 SER580 ASP581 ARG582 ARG583 GLN584 LEU585 MET586 GLU587 TYR588 VAL589 LYS590 ARG591 ILE592 SER593 PRO594 LYS595 PRO596 GLU597 LYS598 ILE599 LEU600 LEU601 CYS602 HIS603 GLY604 ASP605 ASN606 TYR607 LYS608 THR609 LEU610 ASP611 LEU612 ALA613 SER614 SER615 ILE616 TYR617 ARG618 THR619 TYR620 ARG621 ILE622 GLU623 THR624 LYS625 THR626 PRO627 LEU628 ASN629 LEU630 GLU631 THR632 VAL633 ARG634 ILE635 GLN636
Unit 2 VAL2 SER3 GLU4 MET5 LEU6 GLU7 GLU8 ILE9 LYS10 ARG11 THR12 ILE13 MET14 GLN15 ARG16 LEU17 PRO18 GLU19 ARG20 VAL21 GLN22 VAL23 ALA24 LYS25 VAL26 GLU27 PHE28 GLU29 GLY30 PRO31 GLU32 VAL33 VAL34 ILE35 TYR36 THR37 LYS38 ASN39 PRO40 GLU41 ILE42 ILE43 THR44 GLU45 ASN46 GLY47 ASN48 LEU49 ILE50 ARG51 ASP52 ILE53 ALA54 LYS55 ASP56 ILE57 ARG58 LYS59 ARG60 ILE61 ILE62 ILE63 ARG64 SER65 ASP66 ARG67 SER68 VAL69 LEU70 MET71 ASP72 PRO73 GLU74 LYS75 ALA76 ILE77 ARG78 LYS79 ILE80 HIS81 GLU82 ILE83 VAL84 PRO85 GLU86 GLU87 ALA88 LYS89 ILE90 THR91 ASN92 ILE93 SER94 PHE95 ASP96 ASP97 VAL98 THR99 CYS100 GLU101 VAL102 ILE103 ILE104 GLU105 ALA106 ARG107 LYS108 PRO109 GLY110 LEU111 VAL112 ILE113 GLY114 LYS115 TYR116 GLY117 SER118 THR119 SER120 ARG121 GLU122 ILE123 VAL124 LYS125 ASN126 THR127 GLY128 TRP129 ALA130 PRO131 LYS132 ILE133 LEU134 ARG135 THR136 PRO137 PRO138 ILE139 SER140 SER141 GLU142 ILE143 ILE144 GLU145 ARG146 ILE147 ARG148 ARG149 THR150 LEU151 ARG152 LYS153 ASN154 SER155 LYS156 GLU157 ARG158 LYS159 LYS160 ILE161 LEU162 GLN163 GLN164 LEU165 GLY166 ASN167 ARG168 ILE169 HIS170 GLN171 LYS172 PRO173 LYS174 TYR175 ASP176 ASN177 ASP178 TRP179 ALA180 ARG181 LEU182 THR183 ALA184 MET185 GLY186 GLY187 PHE188 ARG189 GLU190 VAL191 GLY192 ARG193 SER194 CYS195 LEU196 TYR197 LEU198 GLN199 THR200 PRO201 ASN202 SER203 ARG204 VAL205 LEU206 LEU207 ASP208 CYS209 GLY210 VAL211 ASN212 VAL213 ALA214 GLY215 GLY216 ASP217 ASP218 LYS219 ASN220 SER221 TYR222 PRO223 TYR224 LEU225 ASN226 VAL227 PRO228 GLU229 PHE230 THR231 LEU232 ASP233 SER234 LEU235 ASP236 ALA237 VAL238 ILE239 ILE240 THR241 HIS242 ALA243 HIS244 LEU245 ASP246 HIS247 SER248 GLY249 PHE250 LEU251 PRO252 TYR253 LEU254 TYR255 HIS256 TYR257 GLY258 TYR259 ASP260 GLY261 PRO262 VAL263 TYR264 CYS265 THR266 ALA267 PRO268 THR269 ARG270 ASP271 LEU272 MET273 THR274 LEU275 LEU276 GLN277 LEU278 ASP279 HIS280 ILE281 ASP282 ILE283 ALA284 HIS285 ARG286 GLU287 ASP288 GLU289 PRO290 LEU291 PRO292 PHE293 ASN294 VAL295 LYS296 HIS297 VAL298 LYS299 LYS300 SER301 VAL302 LYS303 HIS304 THR305 ILE306 THR307 LEU308 ASP309 TYR310 GLY311 GLU312 VAL313 THR314 ASP315 ILE316 ALA317 PRO318 ASP319 ILE320 ARG321 LEU322 THR323 LEU324 HIS325 ASN326 ALA327 GLY328 HIS329 ILE330 LEU331 GLY332 SER333 ALA334 MET335 ALA336 HIS337 LEU338 HIS339 ILE340 GLY341 ASP342 GLY343 GLN344 HIS345 ASN346 MET347 VAL348 TYR349 THR350 GLY351 ASP352 PHE353 LYS354 TYR355 GLU356 GLN357 SER358 ARG359 LEU360 LEU361 GLU362 ALA363 ALA364 ALA365 ASN366 ARG367 PHE368 PRO369 ARG370 ILE371 GLU372 THR373 LEU374 VAL375 MET376 GLU377 SER378 THR379 TYR380 GLY381 GLY382 HIS383 GLU384 ASP385 VAL386 GLN387 PRO388 SER389 ARG390 ASN391 ARG392 ALA393 GLU394 LYS395 GLU396 LEU397 VAL398 LYS399 THR400 ILE401 TYR402 SER403 THR404 LEU405 ARG406 ARG407 GLY408 GLY409 LYS410 ILE411 LEU412 ILE413 PRO414 VAL415 PHE416 ALA417 VAL418 GLY419 ARG420 ALA421 GLN422 GLU423 LEU424 MET425 ILE426 VAL427 LEU428 GLU429 GLU430 TYR431 ILE432 ARG433 THR434 GLY435 ILE436 ILE437 ASP438 GLU439 VAL440 PRO441 VAL442 TYR443 ILE444 ASP445 GLY446 MET447 ILE448 TRP449 GLU450 ALA451 ASN452 ALA453 ILE454 HIS455 THR456 ALA457 ARG458 PRO459 GLU460 TYR461 LEU462 SER463 LYS464 ASP465 LEU466 ARG467 ASP468 GLN469 ILE470 PHE471 HIS472 MET473 GLY474 HIS475 ASN476 PRO477 PHE478 ILE479 SER480 ASP481 ILE482 PHE483 HIS484 LYS485 VAL486 ASN487 GLY488 MET489 ASP490 GLU491 ARG492 ARG493 GLU494 ILE495 VAL496 GLU497 GLY498 GLU499 PRO500 SER501 ILE502 ILE503 LEU504 SER505 THR506 SER507 GLY508 MET509 LEU510 THR511 GLY512 GLY513 ASN514 SER515 LEU516 GLU517 TYR518 PHE519 LYS520 TRP521 LEU522 CYS523 GLU524 ASP525 PRO526 ASP527 ASN528 SER529 LEU530 VAL531 PHE532 VAL533 GLY534 TYR535 GLN536 ALA537 GLU538 GLY539 SER540 LEU541 GLY542 ARG543 ARG544 ILE545 GLN546 LYS547 GLY548 TRP549 LYS550 GLU551 ILE552 PRO553 LEU554 LYS555 ASP556 GLU557 ASP558 ASP559 LYS560 MET561 ARG562 VAL563 TYR564 ASN565 VAL566 ARG567 MET568 ASN569 ILE570 LYS571 THR572 ILE573 GLU574 GLY575 PHE576 SER577 GLY578 HIS579 SER580 ASP581 ARG582 ARG583 GLN584 LEU585 MET586 GLU587 TYR588 VAL589 LYS590 ARG591 ILE592 SER593 PRO594 LYS595 PRO596 GLU597 LYS598 ILE599 LEU600 LEU601 CYS602 HIS603 GLY604 ASP605 ASN606 TYR607 LYS608 THR609 LEU610 ASP611 LEU612 ALA613 SER614 SER615 ILE616 TYR617 ARG618 THR619 TYR620 ARG621 ILE622 GLU623 THR624 LYS625 THR626 PRO627 LEU628 ASN629 LEU630 GLU631 THR632 VAL633 ARG634 ILE635 GLN636
Ligands
Unit 3 ZN1637 ZN1638 PO41639 PO41640 PO41641 ZN1642 K1643
Unit 4 ZN1637 ZN1638 PO41639 K1640
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany