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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE NANA (TIGR4)
Keywords HYDROLASE, SIALIDASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2YA4     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NEURAMINIDASE A  A 470 3720 0
2  Protein   NEURAMINIDASE A  B 471 3729 0
3  Ligand   NEURAMINIDASE A  A 10 0 31
4  Ligand   NEURAMINIDASE A  B 8 0 25
5 Water     838 0 838
total       1797 7449 894

Proteins
Unit 1 ALA307 LEU308 THR309 GLU310 LYS311 THR312 ASP313 ILE314 PHE315 GLU316 SER317 GLY318 ARG319 ASN320 GLY321 ASN322 PRO323 ASN324 LYS325 ASP326 GLY327 ILE328 LYS329 SER330 TYR331 ARG332 ILE333 PRO334 ALA335 LEU336 LEU337 LYS338 THR339 ASP340 LYS341 GLY342 THR343 LEU344 ILE345 ALA346 GLY347 ALA348 ASP349 GLU350 ARG351 ARG352 LEU353 HIS354 SER355 SER356 ASP357 TRP358 GLY359 ASP360 ILE361 GLY362 MET363 VAL364 ILE365 ARG366 ARG367 SER368 GLU369 ASP370 ASN371 GLY372 LYS373 THR374 TRP375 GLY376 ASP377 ARG378 VAL379 THR380 ILE381 THR382 ASN383 LEU384 ARG385 ASP386 ASN387 PRO388 LYS389 ALA390 SER391 ASP392 PRO393 SER394 ILE395 GLY396 SER397 PRO398 VAL399 ASN400 ILE401 ASP402 MET403 VAL404 LEU405 VAL406 GLN407 ASP408 PRO409 GLU410 THR411 LYS412 ARG413 ILE414 PHE415 SER416 ILE417 TYR418 ASP419 MET420 PHE421 PRO422 GLU423 GLY424 LYS425 GLY426 ILE427 PHE428 GLY429 MET430 SER431 SER432 GLN433 LYS434 GLU435 GLU436 ALA437 TYR438 LYS439 LYS440 ILE441 ASP442 GLY443 LYS444 THR445 TYR446 GLN447 ILE448 LEU449 TYR450 ARG451 GLU452 GLY453 GLU454 LYS455 GLY456 ALA457 TYR458 THR459 ILE460 ARG461 GLU462 ASN463 GLY464 THR465 VAL466 TYR467 THR468 PRO469 ASP470 GLY471 LYS472 ALA473 THR474 ASP475 TYR476 ARG477 VAL478 VAL479 VAL480 ASP481 PRO482 VAL483 LYS484 PRO485 ALA486 TYR487 SER488 ASP489 LYS490 GLY491 ASP492 LEU493 TYR494 LYS495 GLY496 ASP497 GLN498 LEU499 LEU500 GLY501 ASN502 ILE503 TYR504 PHE505 THR506 THR507 ASN508 LYS509 THR510 SER511 PRO512 PHE513 ARG514 ILE515 ALA516 LYS517 ASP518 SER519 TYR520 LEU521 TRP522 MET523 SER524 TYR525 SER526 ASP527 ASP528 ASP529 GLY530 LYS531 THR532 TRP533 SER534 ALA535 PRO536 GLN537 ASP538 ILE539 THR540 PRO541 MET542 VAL543 LYS544 ALA545 ASP546 TRP547 MET548 LYS549 PHE550 LEU551 GLY552 VAL553 GLY554 PRO555 GLY556 THR557 GLY558 ILE559 VAL560 LEU561 ARG562 ASN563 GLY564 PRO565 HIS566 LYS567 GLY568 ARG569 ILE570 LEU571 ILE572 PRO573 VAL574 TYR575 THR576 THR577 ASN578 ASN579 VAL580 SER581 HIS582 LEU583 ASP584 GLY585 SER586 GLN587 SER588 SER589 ARG590 VAL591 ILE592 TYR593 SER594 ASP595 ASP596 HIS597 GLY598 LYS599 THR600 TRP601 HIS602 ALA603 GLY604 GLU605 ALA606 VAL607 ASN608 ASP609 ASN610 ARG611 GLN612 VAL613 ASP614 GLY615 GLN616 LYS617 ILE618 HIS619 SER620 SER621 THR622 MET623 ASN624 ASN625 ARG626 ARG627 ALA628 GLN629 ASN630 THR631 GLU632 SER633 THR634 VAL635 VAL636 GLN637 LEU638 ASN639 ASN640 GLY641 ASP642 VAL643 LYS644 LEU645 PHE646 MET647 ARG648 GLY649 LEU650 THR651 GLY652 ASP653 LEU654 GLN655 VAL656 ALA657 THR658 SER659 LYS660 ASP661 GLY662 GLY663 VAL664 THR665 TRP666 GLU667 LYS668 ASP669 ILE670 LYS671 ARG672 TYR673 PRO674 GLN675 VAL676 LYS677 ASP678 VAL679 TYR680 VAL681 GLN682 MET683 SER684 ALA685 ILE686 HIS687 THR688 MET689 HIS690 GLU691 GLY692 LYS693 GLU694 TYR695 ILE696 ILE697 LEU698 SER699 ASN700 ALA701 GLY702 GLY703 PRO704 LYS705 ARG706 GLU707 ASN708 GLY709 MET710 VAL711 HIS712 LEU713 ALA714 ARG715 VAL716 GLU717 GLU718 ASN719 GLY720 GLU721 LEU722 THR723 TRP724 LEU725 LYS726 HIS727 ASN728 PRO729 ILE730 GLN731 LYS732 GLY733 GLU734 PHE735 ALA736 TYR737 ASN738 SER739 LEU740 GLN741 GLU742 LEU743 GLY744 ASN745 GLY746 GLU747 TYR748 GLY749 ILE750 LEU751 TYR752 GLU753 HIS754 THR755 GLU756 LYS757 GLY758 GLN759 ASN760 ALA761 TYR762 THR763 LEU764 SER765 PHE766 ARG767 LYS768 PHE769 ASN770 TRP771 GLU772 PHE773 LEU774 SER775 LYS776
Unit 2 ALA307 LEU308 THR309 GLU310 LYS311 THR312 ASP313 ILE314 PHE315 GLU316 SER317 GLY318 ARG319 ASN320 GLY321 ASN322 PRO323 ASN324 LYS325 ASP326 GLY327 ILE328 LYS329 SER330 TYR331 ARG332 ILE333 PRO334 ALA335 LEU336 LEU337 LYS338 THR339 ASP340 LYS341 GLY342 THR343 LEU344 ILE345 ALA346 GLY347 ALA348 ASP349 GLU350 ARG351 ARG352 LEU353 HIS354 SER355 SER356 ASP357 TRP358 GLY359 ASP360 ILE361 GLY362 MET363 VAL364 ILE365 ARG366 ARG367 SER368 GLU369 ASP370 ASN371 GLY372 LYS373 THR374 TRP375 GLY376 ASP377 ARG378 VAL379 THR380 ILE381 THR382 ASN383 LEU384 ARG385 ASP386 ASN387 PRO388 LYS389 ALA390 SER391 ASP392 PRO393 SER394 ILE395 GLY396 SER397 PRO398 VAL399 ASN400 ILE401 ASP402 MET403 VAL404 LEU405 VAL406 GLN407 ASP408 PRO409 GLU410 THR411 LYS412 ARG413 ILE414 PHE415 SER416 ILE417 TYR418 ASP419 MET420 PHE421 PRO422 GLU423 GLY424 LYS425 GLY426 ILE427 PHE428 GLY429 MET430 SER431 SER432 GLN433 LYS434 GLU435 GLU436 ALA437 TYR438 LYS439 LYS440 ILE441 ASP442 GLY443 LYS444 THR445 TYR446 GLN447 ILE448 LEU449 TYR450 ARG451 GLU452 GLY453 GLU454 LYS455 GLY456 ALA457 TYR458 THR459 ILE460 ARG461 GLU462 ASN463 GLY464 THR465 VAL466 TYR467 THR468 PRO469 ASP470 GLY471 LYS472 ALA473 THR474 ASP475 TYR476 ARG477 VAL478 VAL479 VAL480 ASP481 PRO482 VAL483 LYS484 PRO485 ALA486 TYR487 SER488 ASP489 LYS490 GLY491 ASP492 LEU493 TYR494 LYS495 GLY496 ASP497 GLN498 LEU499 LEU500 GLY501 ASN502 ILE503 TYR504 PHE505 THR506 THR507 ASN508 LYS509 THR510 SER511 PRO512 PHE513 ARG514 ILE515 ALA516 LYS517 ASP518 SER519 TYR520 LEU521 TRP522 MET523 SER524 TYR525 SER526 ASP527 ASP528 ASP529 GLY530 LYS531 THR532 TRP533 SER534 ALA535 PRO536 GLN537 ASP538 ILE539 THR540 PRO541 MET542 VAL543 LYS544 ALA545 ASP546 TRP547 MET548 LYS549 PHE550 LEU551 GLY552 VAL553 GLY554 PRO555 GLY556 THR557 GLY558 ILE559 VAL560 LEU561 ARG562 ASN563 GLY564 PRO565 HIS566 LYS567 GLY568 ARG569 ILE570 LEU571 ILE572 PRO573 VAL574 TYR575 THR576 THR577 ASN578 ASN579 VAL580 SER581 HIS582 LEU583 ASP584 GLY585 SER586 GLN587 SER588 SER589 ARG590 VAL591 ILE592 TYR593 SER594 ASP595 ASP596 HIS597 GLY598 LYS599 THR600 TRP601 HIS602 ALA603 GLY604 GLU605 ALA606 VAL607 ASN608 ASP609 ASN610 ARG611 GLN612 VAL613 ASP614 GLY615 GLN616 LYS617 ILE618 HIS619 SER620 SER621 THR622 MET623 ASN624 ASN625 ARG626 ARG627 ALA628 GLN629 ASN630 THR631 GLU632 SER633 THR634 VAL635 VAL636 GLN637 LEU638 ASN639 ASN640 GLY641 ASP642 VAL643 LYS644 LEU645 PHE646 MET647 ARG648 GLY649 LEU650 THR651 GLY652 ASP653 LEU654 GLN655 VAL656 ALA657 THR658 SER659 LYS660 ASP661 GLY662 GLY663 VAL664 THR665 TRP666 GLU667 LYS668 ASP669 ILE670 LYS671 ARG672 TYR673 PRO674 GLN675 VAL676 LYS677 ASP678 VAL679 TYR680 VAL681 GLN682 MET683 SER684 ALA685 ILE686 HIS687 THR688 MET689 HIS690 GLU691 GLY692 LYS693 GLU694 TYR695 ILE696 ILE697 LEU698 SER699 ASN700 ALA701 GLY702 GLY703 PRO704 LYS705 ARG706 GLU707 ASN708 GLY709 MET710 VAL711 HIS712 LEU713 ALA714 ARG715 VAL716 GLU717 GLU718 ASN719 GLY720 GLU721 LEU722 THR723 TRP724 LEU725 LYS726 HIS727 ASN728 PRO729 ILE730 GLN731 LYS732 GLY733 GLU734 PHE735 ALA736 TYR737 ASN738 SER739 LEU740 GLN741 GLU742 LEU743 GLY744 ASN745 GLY746 GLU747 TYR748 GLY749 ILE750 LEU751 TYR752 GLU753 HIS754 THR755 GLU756 LYS757 GLY758 GLN759 ASN760 ALA761 TYR762 THR763 LEU764 SER765 PHE766 ARG767 LYS768 PHE769 ASN770 TRP771 GLU772 PHE773 LEU774 SER775 LYS776 ASN777

Ligands
Unit 3 FMT1777 FMT1778 EDO1779 EDO1780 EDO1781 FMT1782 FMT1783 FMT1784 FMT1785 CL1786
Unit 4 FMT1778 FMT1779 EDO1780 EDO1781 EDO1782 FMT1783 FMT1784 CL1785

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany