2Y9W - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PPO3, A TYROSINASE FROM AGARICUS BISPOR DEOXY-FORM THAT CONTAINS ADDITIONAL UNKNOWN LECTIN-LIKE SUB
• Keywords: OXIDOREDUCTASE, COPPER-CONTAINING, PIGMENTATION, TYPE-3 COPP PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2Y9W	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	POLYPHENOL OXIDASE	A	391	3207	0
2	Protein	POLYPHENOL OXIDASE	B	391	3207	0
3	Protein	LECTIN-LIKE FOLD PROTEIN	C	136	1056	0
4	Protein	LECTIN-LIKE FOLD PROTEIN	D	135	1048	0
5	Ligand	POLYPHENOL OXIDASE	A	6	0	12
6	Ligand	POLYPHENOL OXIDASE	B	6	0	12
7	Ligand	LECTIN-LIKE FOLD PROTEIN	C	1	0	7
8	Ligand	LECTIN-LIKE FOLD PROTEIN	D	1	0	10
9	Water			389	0	389
total				1456	8518	430

Proteins

Unit 1	SER 2 ASP 3 LYS 4 LYS 5 SER 6 LEU 7 MET 8 PRO 9 LEU 10 VAL 11 GLY 12 ILE 13 PRO 14 GLY 15 GLU 16 ILE 17 LYS 18 ASN 19 ARG 20 LEU 21 ASN 22 ILE 23 LEU 24 ASP 25 PHE 26 VAL 27 LYS 28 ASN 29 ASP 30 LYS 31 PHE 32 PHE 33 THR 34 LEU 35 TYR 36 VAL 37 ARG 38 ALA 39 LEU 40 GLN 41 VAL 42 LEU 43 GLN 44 ALA 45 ARG 46 ASP 47 GLN 48 SER 49 ASP 50 TYR 51 SER 52 SER 53 PHE 54 PHE 55 GLN 56 LEU 57 GLY 58 GLY 59 ILE 60 HIS 61 GLY 62 LEU 63 PRO 64 TYR 65 THR 66 GLU 67 TRP 68 ALA 69 LYS 70 ALA 71 GLN 72 PRO 73 GLN 74 LEU 75 HIS 76 LEU 77 TYR 78 LYS 79 ALA 80 ASN 81 TYR 82 CYS 83 THR 84 HIS 85 GLY 86 THR 87 VAL 88 LEU 89 PHE 90 PRO 91 THR 92 TRP 93 HIS 94 ARG 95 ALA 96 TYR 97 GLU 98 SER 99 THR 100 TRP 101 GLU 102 GLN 103 THR 104 LEU 105 TRP 106 GLU 107 ALA 108 ALA 109 GLY 110 THR 111 VAL 112 ALA 113 GLN 114 ARG 115 PHE 116 THR 117 THR 118 SER 119 ASP 120 GLN 121 ALA 122 GLU 123 TRP 124 ILE 125 GLN 126 ALA 127 ALA 128 LYS 129 ASP 130 LEU 131 ARG 132 GLN 133 PRO 134 PHE 135 TRP 136 ASP 137 TRP 138 GLY 139 TYR 140 TRP 141 PRO 142 ASN 143 ASP 144 PRO 145 ASP 146 PHE 147 ILE 148 GLY 149 LEU 150 PRO 151 ASP 152 GLN 153 VAL 154 ILE 155 ARG 156 ASP 157 LYS 158 GLN 159 VAL 160 GLU 161 ILE 162 THR 163 ASP 164 TYR 165 ASN 166 GLY 167 THR 168 LYS 169 ILE 170 GLU 171 VAL 172 GLU 173 ASN 174 PRO 175 ILE 176 LEU 177 HIS 178 TYR 179 LYS 180 PHE 181 HIS 182 PRO 183 ILE 184 GLU 185 PRO 186 THR 187 PHE 188 GLU 189 GLY 190 ASP 191 PHE 192 ALA 193 GLN 194 TRP 195 GLN 196 THR 197 THR 198 MET 199 ARG 200 TYR 201 PRO 202 ASP 203 VAL 204 GLN 205 LYS 206 GLN 207 GLU 208 ASN 209 ILE 210 GLU 211 GLY 212 MET 213 ILE 214 ALA 215 GLY 216 ILE 217 LYS 218 ALA 219 ALA 220 ALA 221 PRO 222 GLY 223 PHE 224 ARG 225 GLU 226 TRP 227 THR 228 PHE 229 ASN 230 MET 231 LEU 232 THR 233 LYS 234 ASN 235 TYR 236 THR 237 TRP 238 GLU 239 LEU 240 PHE 241 SER 242 ASN 243 HIS 244 GLY 245 ALA 246 VAL 247 VAL 248 GLY 249 ALA 250 HIS 251 ALA 252 ASN 253 SER 254 LEU 255 GLU 256 MET 257 VAL 258 HIS 259 ASN 260 THR 261 VAL 262 HIS 263 PHE 264 LEU 265 ILE 266 GLY 267 ARG 268 ASP 269 PRO 270 THR 271 LEU 272 ASP 273 PRO 274 LEU 275 VAL 276 PRO 277 GLY 278 HIS 279 MET 280 GLY 281 SER 282 VAL 283 PRO 284 HIS 285 ALA 286 ALA 287 PHE 288 ASP 289 PRO 290 ILE 291 PHE 292 TRP 293 MET 294 HIS 295 HIS 296 CYS 297 ASN 298 VAL 299 ASP 300 ARG 301 LEU 302 LEU 303 ALA 304 LEU 305 TRP 306 GLN 307 THR 308 MET 309 ASN 310 TYR 311 ASP 312 VAL 313 TYR 314 VAL 315 SER 316 GLU 317 GLY 318 MET 319 ASN 320 ARG 321 GLU 322 ALA 323 THR 324 MET 325 GLY 326 LEU 327 ILE 328 PRO 329 GLY 330 GLN 331 VAL 332 LEU 333 THR 334 GLU 335 ASP 336 SER 337 PRO 338 LEU 339 GLU 340 PRO 341 PHE 342 TYR 343 THR 344 LYS 345 ASN 346 GLN 347 ASP 348 PRO 349 TRP 350 GLN 351 SER 352 ASP 353 ASP 354 LEU 355 GLU 356 ASP 357 TRP 358 GLU 359 THR 360 LEU 361 GLY 362 PHE 363 SER 364 TYR 365 PRO 366 ASP 367 PHE 368 ASP 369 PRO 370 VAL 371 LYS 372 GLY 373 LYS 374 SER 375 LYS 376 GLU 377 GLU 378 LYS 379 SER 380 VAL 381 TYR 382 ILE 383 ASN 384 ASP 385 TRP 386 VAL 387 HIS 388 LYS 389 HIS 390 TYR 391 GLY 392
Unit 2	SER 2 ASP 3 LYS 4 LYS 5 SER 6 LEU 7 MET 8 PRO 9 LEU 10 VAL 11 GLY 12 ILE 13 PRO 14 GLY 15 GLU 16 ILE 17 LYS 18 ASN 19 ARG 20 LEU 21 ASN 22 ILE 23 LEU 24 ASP 25 PHE 26 VAL 27 LYS 28 ASN 29 ASP 30 LYS 31 PHE 32 PHE 33 THR 34 LEU 35 TYR 36 VAL 37 ARG 38 ALA 39 LEU 40 GLN 41 VAL 42 LEU 43 GLN 44 ALA 45 ARG 46 ASP 47 GLN 48 SER 49 ASP 50 TYR 51 SER 52 SER 53 PHE 54 PHE 55 GLN 56 LEU 57 GLY 58 GLY 59 ILE 60 HIS 61 GLY 62 LEU 63 PRO 64 TYR 65 THR 66 GLU 67 TRP 68 ALA 69 LYS 70 ALA 71 GLN 72 PRO 73 GLN 74 LEU 75 HIS 76 LEU 77 TYR 78 LYS 79 ALA 80 ASN 81 TYR 82 CYS 83 THR 84 HIS 85 GLY 86 THR 87 VAL 88 LEU 89 PHE 90 PRO 91 THR 92 TRP 93 HIS 94 ARG 95 ALA 96 TYR 97 GLU 98 SER 99 THR 100 TRP 101 GLU 102 GLN 103 THR 104 LEU 105 TRP 106 GLU 107 ALA 108 ALA 109 GLY 110 THR 111 VAL 112 ALA 113 GLN 114 ARG 115 PHE 116 THR 117 THR 118 SER 119 ASP 120 GLN 121 ALA 122 GLU 123 TRP 124 ILE 125 GLN 126 ALA 127 ALA 128 LYS 129 ASP 130 LEU 131 ARG 132 GLN 133 PRO 134 PHE 135 TRP 136 ASP 137 TRP 138 GLY 139 TYR 140 TRP 141 PRO 142 ASN 143 ASP 144 PRO 145 ASP 146 PHE 147 ILE 148 GLY 149 LEU 150 PRO 151 ASP 152 GLN 153 VAL 154 ILE 155 ARG 156 ASP 157 LYS 158 GLN 159 VAL 160 GLU 161 ILE 162 THR 163 ASP 164 TYR 165 ASN 166 GLY 167 THR 168 LYS 169 ILE 170 GLU 171 VAL 172 GLU 173 ASN 174 PRO 175 ILE 176 LEU 177 HIS 178 TYR 179 LYS 180 PHE 181 HIS 182 PRO 183 ILE 184 GLU 185 PRO 186 THR 187 PHE 188 GLU 189 GLY 190 ASP 191 PHE 192 ALA 193 GLN 194 TRP 195 GLN 196 THR 197 THR 198 MET 199 ARG 200 TYR 201 PRO 202 ASP 203 VAL 204 GLN 205 LYS 206 GLN 207 GLU 208 ASN 209 ILE 210 GLU 211 GLY 212 MET 213 ILE 214 ALA 215 GLY 216 ILE 217 LYS 218 ALA 219 ALA 220 ALA 221 PRO 222 GLY 223 PHE 224 ARG 225 GLU 226 TRP 227 THR 228 PHE 229 ASN 230 MET 231 LEU 232 THR 233 LYS 234 ASN 235 TYR 236 THR 237 TRP 238 GLU 239 LEU 240 PHE 241 SER 242 ASN 243 HIS 244 GLY 245 ALA 246 VAL 247 VAL 248 GLY 249 ALA 250 HIS 251 ALA 252 ASN 253 SER 254 LEU 255 GLU 256 MET 257 VAL 258 HIS 259 ASN 260 THR 261 VAL 262 HIS 263 PHE 264 LEU 265 ILE 266 GLY 267 ARG 268 ASP 269 PRO 270 THR 271 LEU 272 ASP 273 PRO 274 LEU 275 VAL 276 PRO 277 GLY 278 HIS 279 MET 280 GLY 281 SER 282 VAL 283 PRO 284 HIS 285 ALA 286 ALA 287 PHE 288 ASP 289 PRO 290 ILE 291 PHE 292 TRP 293 MET 294 HIS 295 HIS 296 CYS 297 ASN 298 VAL 299 ASP 300 ARG 301 LEU 302 LEU 303 ALA 304 LEU 305 TRP 306 GLN 307 THR 308 MET 309 ASN 310 TYR 311 ASP 312 VAL 313 TYR 314 VAL 315 SER 316 GLU 317 GLY 318 MET 319 ASN 320 ARG 321 GLU 322 ALA 323 THR 324 MET 325 GLY 326 LEU 327 ILE 328 PRO 329 GLY 330 GLN 331 VAL 332 LEU 333 THR 334 GLU 335 ASP 336 SER 337 PRO 338 LEU 339 GLU 340 PRO 341 PHE 342 TYR 343 THR 344 LYS 345 ASN 346 GLN 347 ASP 348 PRO 349 TRP 350 GLN 351 SER 352 ASP 353 ASP 354 LEU 355 GLU 356 ASP 357 TRP 358 GLU 359 THR 360 LEU 361 GLY 362 PHE 363 SER 364 TYR 365 PRO 366 ASP 367 PHE 368 ASP 369 PRO 370 VAL 371 LYS 372 GLY 373 LYS 374 SER 375 LYS 376 GLU 377 GLU 378 LYS 379 SER 380 VAL 381 TYR 382 ILE 383 ASN 384 ASP 385 TRP 386 VAL 387 HIS 388 LYS 389 HIS 390 TYR 391 GLY 392
Unit 3	LEU 9 ASP 10 LEU 11 PRO 12 GLY 13 THR 14 ARG 15 ILE 16 LEU 17 ASN 18 GLY 19 ALA 20 ASN 21 TRP 22 ALA 23 ASN 24 ASN 25 SER 26 ALA 27 THR 28 SER 35 GLY 36 THR 37 LEU 38 ILE 39 ILE 40 PHE 41 ASP 42 GLN 43 SER 44 THR 45 PRO 46 GLY 47 GLN 48 ASP 49 ALA 50 ASP 51 ARG 52 TRP 53 LEU 54 ILE 55 HIS 56 ASN 57 TYR 58 LEU 59 ASP 60 GLY 61 TYR 62 LYS 63 ILE 64 PHE 65 ASN 66 MET 67 GLY 68 SER 69 ASN 70 ASN 71 TRP 72 ALA 73 SER 74 VAL 75 SER 76 ARG 77 GLY 78 ASN 79 THR 80 VAL 81 LEU 82 GLY 83 VAL 84 SER 85 GLU 86 PHE 87 ASP 88 GLY 89 GLN 90 THR 91 CYS 92 LYS 93 TRP 94 SER 95 ILE 96 GLU 97 TYR 98 SER 99 GLY 100 ASN 101 GLY 102 GLU 103 GLU 104 PHE 105 TRP 106 ILE 107 ARG 108 VAL 109 PRO 110 ARG 111 GLU 112 GLY 113 GLY 114 GLY 115 GLY 116 ALA 117 VAL 118 TRP 119 THR 120 ILE 121 LYS 122 PRO 123 ALA 124 SER 125 SER 126 GLN 127 GLY 128 PRO 129 THR 130 THR 131 VAL 132 PHE 133 LEU 134 ASP 135 LEU 136 LEU 137 LYS 138 GLU 139 THR 140 ASP 141 PRO 142 ASN 143 GLN 144 ARG 145 ILE 146 LYS 147 PHE 148 ALA 149 VAL 150
Unit 4	ASP 10 LEU 11 PRO 12 GLY 13 THR 14 ARG 15 ILE 16 LEU 17 ASN 18 GLY 19 ALA 20 ASN 21 TRP 22 ALA 23 ASN 24 ASN 25 SER 26 ALA 27 THR 28 SER 35 GLY 36 THR 37 LEU 38 ILE 39 ILE 40 PHE 41 ASP 42 GLN 43 SER 44 THR 45 PRO 46 GLY 47 GLN 48 ASP 49 ALA 50 ASP 51 ARG 52 TRP 53 LEU 54 ILE 55 HIS 56 ASN 57 TYR 58 LEU 59 ASP 60 GLY 61 TYR 62 LYS 63 ILE 64 PHE 65 ASN 66 MET 67 GLY 68 SER 69 ASN 70 ASN 71 TRP 72 ALA 73 SER 74 VAL 75 SER 76 ARG 77 GLY 78 ASN 79 THR 80 VAL 81 LEU 82 GLY 83 VAL 84 SER 85 GLU 86 PHE 87 ASP 88 GLY 89 GLN 90 THR 91 CYS 92 LYS 93 TRP 94 SER 95 ILE 96 GLU 97 TYR 98 SER 99 GLY 100 ASN 101 GLY 102 GLU 103 GLU 104 PHE 105 TRP 106 ILE 107 ARG 108 VAL 109 PRO 110 ARG 111 GLU 112 GLY 113 GLY 114 GLY 115 GLY 116 ALA 117 VAL 118 TRP 119 THR 120 ILE 121 LYS 122 PRO 123 ALA 124 SER 125 SER 126 GLN 127 GLY 128 PRO 129 THR 130 THR 131 VAL 132 PHE 133 LEU 134 ASP 135 LEU 136 LEU 137 LYS 138 GLU 139 THR 140 ASP 141 PRO 142 ASN 143 GLN 144 ARG 145 ILE 146 LYS 147 PHE 148 ALA 149 VAL 150

Ligands

Unit 5	CU 400 CU 401 HO 402 HO 403 HO 404 PEG 1393
Unit 6	CU 400 CU 401 HO 402 HO 403 HO 404 PEG 1393
Unit 7	PEG 1151
Unit 8	PGE 1151