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Sequence, Chains, Asymmetric and Biological Units

Title DNTR INDUCER BINDING DOMAIN
Keywords TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2Y84     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LYSR-TYPE REGULATORY PROTEIN  A 213 1687 0
2  Protein   LYSR-TYPE REGULATORY PROTEIN  B 213 1680 0
3  Protein   LYSR-TYPE REGULATORY PROTEIN  C 213 1672 0
4  Protein   LYSR-TYPE REGULATORY PROTEIN  D 212 1671 0
5  Protein   LYSR-TYPE REGULATORY PROTEIN  E 212 1679 0
6  Protein   LYSR-TYPE REGULATORY PROTEIN  F 214 1678 0
7  Protein   LYSR-TYPE REGULATORY PROTEIN  G 213 1686 0
8  Protein   LYSR-TYPE REGULATORY PROTEIN  H 211 1669 0
9  Ligand   LYSR-TYPE REGULATORY PROTEIN  D 2 0 12
10  Ligand   LYSR-TYPE REGULATORY PROTEIN  E 1 0 6
11  Ligand   LYSR-TYPE REGULATORY PROTEIN  H 1 0 6
12 Water     104 0 104
total       1809 13422 128
Proteins
Unit 1 ASP88 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300
Unit 2 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300 ALA301
Unit 3 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300 ALA301
Unit 4 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300
Unit 5 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300
Unit 6 ASP88 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300 ALA301
Unit 7 SER89 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300 ALA301
Unit 8 PHE90 ASP91 PRO92 PHE93 ALA94 SER95 THR96 ARG97 THR98 PHE99 ASN100 LEU101 ALA102 MET103 THR104 ASP105 ILE106 GLY107 GLU108 MET109 TYR110 PHE111 MET112 PRO113 PRO114 LEU115 MET116 GLU117 ALA118 LEU119 ALA120 GLN121 ARG122 ALA123 PRO124 HIS125 ILE126 GLN127 ILE128 SER129 THR130 LEU131 ARG132 PRO133 ASN134 ALA135 GLY136 ASN137 LEU138 LYS139 GLU140 ASP141 MET142 GLU143 SER144 GLY145 ALA146 VAL147 ASP148 LEU149 ALA150 LEU151 GLY152 LEU153 LEU154 PRO155 GLU156 LEU157 GLN158 THR159 GLY160 PHE161 PHE162 GLN163 ARG164 ARG165 LEU166 PHE167 ARG168 HIS169 ARG170 TYR171 VAL172 CYS173 MET174 PHE175 ARG176 LYS177 ASP178 HIS179 PRO180 SER181 ALA182 LYS183 SER184 PRO185 MET186 SER187 LEU188 LYS189 GLN190 PHE191 THR192 GLU193 LEU194 GLU195 HIS196 VAL197 GLY198 VAL199 VAL200 ALA201 LEU202 ASN203 THR204 GLY205 HIS206 GLY207 GLU208 VAL209 ASP210 GLY211 LEU212 LEU213 GLU214 ARG215 ALA216 GLY217 ILE218 LYS219 ARG220 ARG221 MET222 ARG223 LEU224 VAL225 VAL226 PRO227 HIS228 PHE229 ILE230 ALA231 ILE232 GLY233 PRO234 ILE235 LEU236 HIS237 SER238 THR239 ASP240 LEU241 ILE242 ALA243 THR244 VAL245 PRO246 GLN247 ARG248 PHE249 ALA250 VAL251 ARG252 CYS253 GLU254 VAL255 PRO256 PHE257 GLY258 LEU259 THR260 THR261 SER262 PRO263 HIS264 PRO265 ALA266 LYS267 LEU268 PRO269 ASP270 ILE271 ALA272 ILE273 ASN274 LEU275 PHE276 TRP277 HIS278 ALA279 LYS280 TYR281 ASN282 ARG283 ASP284 PRO285 GLY286 ASN287 MET288 TRP289 LEU290 ARG291 GLN292 LEU293 PHE294 VAL295 GLU296 LEU297 PHE298 SER299 GLU300
Ligands
Unit 9 GOL1301 GOL1302
Unit 10 GOL1301
Unit 11 GOL1301
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany