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Sequence, Chains, Asymmetric and Biological Units

Title ATOMIC MODEL OF THE OCR-BOUND METHYLASE COMPLEX FROM THE TYP RESTRICTION-MODIFICATION ENZYME ECOKI (M2S1). BASED ON FITT EM MAP 1534.
Keywords TRANSFERASE
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2Y7C     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 464 3622 0
2  Protein   TYPE I RESTRICTION ENZYME ECOKI M PROTEIN  B 529 4175 0
3  Protein   TYPE I RESTRICTION ENZYME ECOKI M PROTEIN  C 529 4175 0
4  Protein   GENE 0.3 PROTEIN  D 107 877 0
5  Protein   GENE 0.3 PROTEIN  E 106 876 0
total       1735 13725 0

Proteins
Unit 1 MET1 SER2 ALA3 GLY4 LYS5 LEU6 PRO7 GLU8 GLY9 TRP10 VAL11 ILE12 ALA13 PRO14 VAL15 SER16 THR17 VAL18 THR19 THR20 LEU21 ILE22 ARG23 GLY24 VAL25 THR26 TYR27 LYS28 LYS29 GLU30 GLN31 ALA32 ILE33 ASN34 TYR35 LEU36 LYS37 ASP38 ASP39 TYR40 LEU41 PRO42 LEU43 ILE44 ARG45 ALA46 ASN47 ASN48 ILE49 GLN50 ASN51 GLY52 LYS53 PHE54 ASP55 THR56 THR57 ASP58 LEU59 VAL60 PHE61 VAL62 PRO63 LYS64 ASN65 LEU66 VAL67 LYS68 GLU69 SER70 GLN71 LYS72 ILE73 SER74 PRO75 GLU76 ASP77 ILE78 VAL79 ILE80 ALA81 MET82 SER83 SER84 GLY85 SER86 LYS87 SER88 VAL89 VAL90 GLY91 LYS92 SER93 ALA94 HIS95 GLN96 HIS97 LEU98 PRO99 PHE100 GLU101 CYS102 SER103 PHE104 GLY105 ALA106 PHE107 CYS108 GLY109 VAL110 LEU111 ARG112 PRO113 GLU114 LYS115 LEU116 ILE117 PHE118 SER119 GLY120 PHE121 ILE122 ALA123 HIS124 PHE125 THR126 LYS127 SER128 SER129 LEU130 TYR131 ARG132 ASN133 LYS134 ILE135 SER136 SER137 LEU138 SER139 ALA140 GLY141 ALA142 ASN143 ILE144 ASN145 ASN146 ILE147 LYS148 PRO149 ALA150 SER151 PHE152 ASP153 LEU154 ILE155 ASN156 ILE157 PRO158 ILE159 PRO160 PRO161 LEU162 ALA163 GLU164 GLN165 LYS166 ILE167 ILE168 ALA169 GLU170 LYS171 LEU172 ASP173 THR174 LEU175 LEU176 ALA177 GLN178 VAL179 ASP180 SER181 THR182 LYS183 ALA184 ARG185 PHE186 GLU187 GLN188 ILE189 PRO190 GLN191 ILE192 LEU193 LYS194 ARG195 PHE196 ARG197 GLN198 ALA199 VAL200 LEU201 GLY202 GLY203 ALA204 VAL205 ASN206 GLY207 LYS208 LEU209 THR210 GLU211 LYS212 TRP213 ARG214 ASN215 PHE216 GLU217 PRO218 GLN219 HIS220 SER221 VAL222 PHE223 LYS224 LYS225 LEU226 ASN227 PHE228 GLU229 SER230 ILE231 LEU232 THR233 GLU234 LEU235 ARG236 ASN237 GLY238 LEU239 SER240 SER241 LYS242 PRO243 ASN244 GLU245 SER246 GLY247 VAL248 GLY249 HIS250 PRO251 ILE252 LEU253 ARG254 ILE255 SER256 SER257 VAL258 ARG259 ALA260 GLY261 HIS262 VAL263 ASP264 GLN265 ASN266 ASP267 ILE268 ARG269 PHE270 LEU271 GLU272 CYS273 SER274 GLU275 SER276 GLU277 LEU278 ASN279 ARG280 HIS281 LYS282 LEU283 GLN284 ASP285 GLY286 ASP287 LEU288 LEU289 PHE290 THR291 ARG292 TYR293 ASN294 GLY295 SER296 LEU297 GLU298 PHE299 VAL300 GLY301 VAL302 CYS303 GLY304 LEU305 LEU306 LYS307 LYS308 LEU309 GLN310 HIS311 GLN312 ASN313 LEU314 LEU315 TYR316 PRO317 ASP318 LYS319 LEU320 ILE321 ARG322 ALA323 ARG324 LEU325 THR326 LYS327 ASP328 ALA329 LEU330 PRO331 GLU332 TYR333 ILE334 GLU335 ILE336 PHE337 PHE338 SER339 SER340 PRO341 SER342 ALA343 ARG344 ASN345 ALA346 MET347 MET348 ASN349 CYS350 VAL351 LYS352 THR353 THR354 SER355 GLY356 GLN357 LYS358 GLY359 ILE360 SER361 GLY362 LYS363 ASP364 ILE365 LYS366 SER367 GLN368 VAL369 VAL370 LEU371 LEU372 PRO373 PRO374 VAL375 LYS376 GLU377 GLN378 ALA379 GLU380 ILE381 VAL382 ARG383 ARG384 VAL385 GLU386 GLN387 LEU388 PHE389 ALA390 TYR391 ALA392 ASP393 THR394 ILE395 GLU396 LYS397 GLN398 VAL399 ASN400 ASN401 ALA402 LEU403 ALA404 ARG405 VAL406 ASN407 ASN408 LEU409 THR410 GLN411 SER412 ILE413 LEU414 ALA415 LYS416 ALA417 PHE418 ARG419 GLY420 GLU421 LEU422 THR423 ALA424 GLN425 TRP426 ARG427 ALA428 GLU429 ASN430 PRO431 ASP432 LEU433 ILE434 SER435 GLY436 GLU437 ASN438 SER439 ALA440 ALA441 ALA442 LEU443 LEU444 GLU445 LYS446 ILE447 LYS448 ALA449 GLU450 ARG451 ALA452 ALA453 SER454 GLY455 GLY456 LYS457 LYS458 ALA459 SER460 ARG461 LYS462 LYS463 SER464
Unit 2 MET1 ASN2 ASN3 ASN4 ASP5 LEU6 VAL7 ALA8 LYS9 LEU10 TRP11 LYS12 LEU13 CYS14 ASP15 ASN16 LEU17 ARG18 ASP19 GLY20 GLY21 VAL22 SER23 TYR24 GLN25 ASN26 TYR27 VAL28 ASN29 GLU30 LEU31 ALA32 SER33 LEU34 LEU35 PHE36 LEU37 LYS38 MET39 CYS40 LYS41 GLU42 THR43 GLY44 GLN45 GLU46 ALA47 GLU48 TYR49 LEU50 PRO51 GLU52 GLY53 TYR54 ARG55 TRP56 ASP57 ASP58 LEU59 LYS60 SER61 ARG62 ILE63 GLY64 GLN65 GLU66 GLN67 LEU68 GLN69 PHE70 TYR71 ARG72 LYS73 MET74 LEU75 VAL76 HIS77 LEU78 GLY79 GLU80 ASP81 ASP82 LYS83 LYS84 LEU85 VAL86 GLN87 ALA88 VAL89 PHE90 HIS91 ASN92 VAL93 SER94 THR95 THR96 ILE97 THR98 GLU99 PRO100 LYS101 GLN102 ILE103 THR104 ALA105 LEU106 VAL107 SER108 ASN109 MET110 ASP111 SER112 LEU113 ASP114 TRP115 TYR116 ASN117 GLY118 ALA119 HIS120 GLY121 LYS122 SER123 ARG124 ASP125 ASP126 PHE127 GLY128 ASP129 MET130 TYR131 GLU132 GLY133 LEU134 LEU135 GLN136 LYS137 ASN138 ALA139 ASN140 GLU141 THR142 LYS143 SER144 GLY145 ALA146 GLY147 GLN148 TYR149 PHE150 THR151 PRO152 ARG153 PRO154 LEU155 ILE156 LYS157 THR158 ILE159 ILE160 HIS161 LEU162 LEU163 LYS164 PRO165 GLN166 PRO167 ARG168 GLU169 VAL170 VAL171 GLN172 ASP173 PRO174 ALA175 ALA176 GLY177 THR178 ALA179 GLY180 PHE181 LEU182 ILE183 GLU184 ALA185 ASP186 ARG187 TYR188 VAL189 LYS190 SER191 GLN192 THR193 ASN194 ASP195 LEU196 ASP197 ASP198 LEU199 ASP200 GLY201 ASP202 THR203 GLN204 ASP205 PHE206 GLN207 ILE208 HIS209 ARG210 ALA211 PHE212 ILE213 GLY214 LEU215 GLU216 LEU217 VAL218 PRO219 GLY220 THR221 ARG222 ARG223 LEU224 ALA225 LEU226 MET227 ASN228 CYS229 LEU230 LEU231 HIS232 ASP233 ILE234 GLU235 GLY236 ASN237 LEU238 ASP239 HIS240 GLY241 GLY242 ALA243 ILE244 ARG245 LEU246 GLY247 ASN248 THR249 LEU250 GLY251 SER252 ASP253 GLY254 GLU255 ASN256 LEU257 PRO258 LYS259 ALA260 HIS261 ILE262 VAL263 ALA264 THR265 ASN266 PRO267 PRO268 PHE269 GLY270 SER271 ALA272 ALA273 GLY274 THR275 ASN276 ILE277 THR278 ARG279 THR280 PHE281 VAL282 HIS283 PRO284 THR285 SER286 ASN287 LYS288 GLN289 LEU290 CYS291 PHE292 MET293 GLN294 HIS295 ILE296 ILE297 GLU298 THR299 LEU300 HIS301 PRO302 GLY303 GLY304 ARG305 ALA306 ALA307 VAL308 VAL309 VAL310 PRO311 ASP312 ASN313 VAL314 LEU315 PHE316 GLU317 GLY318 GLY319 LYS320 GLY321 THR322 ASP323 ILE324 ARG325 ARG326 ASP327 LEU328 MET329 ASP330 LYS331 CYS332 HIS333 LEU334 HIS335 THR336 ILE337 LEU338 ARG339 LEU340 PRO341 THR342 GLY343 ILE344 PHE345 TYR346 ALA347 GLN348 GLY349 VAL350 LYS351 THR352 ASN353 VAL354 LEU355 PHE356 PHE357 THR358 LYS359 GLY360 THR361 VAL362 ALA363 ASN364 PRO365 ASN366 GLN367 ASP368 LYS369 ASN370 CYS371 THR372 ASP373 ASP374 VAL375 TRP376 VAL377 TYR378 ASP379 LEU380 ARG381 THR382 ASN383 MET384 PRO385 SER386 PHE387 GLY388 LYS389 ARG390 THR391 PRO392 PHE393 THR394 ASP395 GLU396 HIS397 LEU398 GLN399 PRO400 PHE401 GLU402 ARG403 VAL404 TYR405 GLY406 GLU407 ASP408 PRO409 HIS410 GLY411 LEU412 SER413 PRO414 ARG415 THR416 GLU417 GLY418 GLU419 TRP420 SER421 PHE422 ASN423 ALA424 GLU425 GLU426 THR427 GLU428 VAL429 ALA430 ASP431 SER432 GLU433 GLU434 ASN435 LYS436 ASN437 THR438 ASP439 GLN440 HIS441 LEU442 ALA443 THR444 SER445 ARG446 TRP447 ARG448 LYS449 PHE450 SER451 ARG452 GLU453 TRP454 ILE455 ARG456 THR457 ALA458 LYS459 SER460 ASP461 SER462 LEU463 ASP464 ILE465 SER466 TRP467 LEU468 LYS469 ASP470 LYS471 ASP472 SER473 ILE474 ASP475 ALA476 ASP477 SER478 LEU479 PRO480 GLU481 PRO482 ASP483 VAL484 LEU485 ALA486 ALA487 GLU488 ALA489 MET490 GLY491 GLU492 LEU493 VAL494 GLN495 ALA496 LEU497 SER498 GLU499 LEU500 ASP501 ALA502 LEU503 MET504 ARG505 GLU506 LEU507 GLY508 ALA509 SER510 ASP511 GLU512 ALA513 ASP514 LEU515 GLN516 ARG517 GLN518 LEU519 LEU520 GLU521 GLU522 ALA523 PHE524 GLY525 GLY526 VAL527 LYS528 GLU529
Unit 3 MET1 ASN2 ASN3 ASN4 ASP5 LEU6 VAL7 ALA8 LYS9 LEU10 TRP11 LYS12 LEU13 CYS14 ASP15 ASN16 LEU17 ARG18 ASP19 GLY20 GLY21 VAL22 SER23 TYR24 GLN25 ASN26 TYR27 VAL28 ASN29 GLU30 LEU31 ALA32 SER33 LEU34 LEU35 PHE36 LEU37 LYS38 MET39 CYS40 LYS41 GLU42 THR43 GLY44 GLN45 GLU46 ALA47 GLU48 TYR49 LEU50 PRO51 GLU52 GLY53 TYR54 ARG55 TRP56 ASP57 ASP58 LEU59 LYS60 SER61 ARG62 ILE63 GLY64 GLN65 GLU66 GLN67 LEU68 GLN69 PHE70 TYR71 ARG72 LYS73 MET74 LEU75 VAL76 HIS77 LEU78 GLY79 GLU80 ASP81 ASP82 LYS83 LYS84 LEU85 VAL86 GLN87 ALA88 VAL89 PHE90 HIS91 ASN92 VAL93 SER94 THR95 THR96 ILE97 THR98 GLU99 PRO100 LYS101 GLN102 ILE103 THR104 ALA105 LEU106 VAL107 SER108 ASN109 MET110 ASP111 SER112 LEU113 ASP114 TRP115 TYR116 ASN117 GLY118 ALA119 HIS120 GLY121 LYS122 SER123 ARG124 ASP125 ASP126 PHE127 GLY128 ASP129 MET130 TYR131 GLU132 GLY133 LEU134 LEU135 GLN136 LYS137 ASN138 ALA139 ASN140 GLU141 THR142 LYS143 SER144 GLY145 ALA146 GLY147 GLN148 TYR149 PHE150 THR151 PRO152 ARG153 PRO154 LEU155 ILE156 LYS157 THR158 ILE159 ILE160 HIS161 LEU162 LEU163 LYS164 PRO165 GLN166 PRO167 ARG168 GLU169 VAL170 VAL171 GLN172 ASP173 PRO174 ALA175 ALA176 GLY177 THR178 ALA179 GLY180 PHE181 LEU182 ILE183 GLU184 ALA185 ASP186 ARG187 TYR188 VAL189 LYS190 SER191 GLN192 THR193 ASN194 ASP195 LEU196 ASP197 ASP198 LEU199 ASP200 GLY201 ASP202 THR203 GLN204 ASP205 PHE206 GLN207 ILE208 HIS209 ARG210 ALA211 PHE212 ILE213 GLY214 LEU215 GLU216 LEU217 VAL218 PRO219 GLY220 THR221 ARG222 ARG223 LEU224 ALA225 LEU226 MET227 ASN228 CYS229 LEU230 LEU231 HIS232 ASP233 ILE234 GLU235 GLY236 ASN237 LEU238 ASP239 HIS240 GLY241 GLY242 ALA243 ILE244 ARG245 LEU246 GLY247 ASN248 THR249 LEU250 GLY251 SER252 ASP253 GLY254 GLU255 ASN256 LEU257 PRO258 LYS259 ALA260 HIS261 ILE262 VAL263 ALA264 THR265 ASN266 PRO267 PRO268 PHE269 GLY270 SER271 ALA272 ALA273 GLY274 THR275 ASN276 ILE277 THR278 ARG279 THR280 PHE281 VAL282 HIS283 PRO284 THR285 SER286 ASN287 LYS288 GLN289 LEU290 CYS291 PHE292 MET293 GLN294 HIS295 ILE296 ILE297 GLU298 THR299 LEU300 HIS301 PRO302 GLY303 GLY304 ARG305 ALA306 ALA307 VAL308 VAL309 VAL310 PRO311 ASP312 ASN313 VAL314 LEU315 PHE316 GLU317 GLY318 GLY319 LYS320 GLY321 THR322 ASP323 ILE324 ARG325 ARG326 ASP327 LEU328 MET329 ASP330 LYS331 CYS332 HIS333 LEU334 HIS335 THR336 ILE337 LEU338 ARG339 LEU340 PRO341 THR342 GLY343 ILE344 PHE345 TYR346 ALA347 GLN348 GLY349 VAL350 LYS351 THR352 ASN353 VAL354 LEU355 PHE356 PHE357 THR358 LYS359 GLY360 THR361 VAL362 ALA363 ASN364 PRO365 ASN366 GLN367 ASP368 LYS369 ASN370 CYS371 THR372 ASP373 ASP374 VAL375 TRP376 VAL377 TYR378 ASP379 LEU380 ARG381 THR382 ASN383 MET384 PRO385 SER386 PHE387 GLY388 LYS389 ARG390 THR391 PRO392 PHE393 THR394 ASP395 GLU396 HIS397 LEU398 GLN399 PRO400 PHE401 GLU402 ARG403 VAL404 TYR405 GLY406 GLU407 ASP408 PRO409 HIS410 GLY411 LEU412 SER413 PRO414 ARG415 THR416 GLU417 GLY418 GLU419 TRP420 SER421 PHE422 ASN423 ALA424 GLU425 GLU426 THR427 GLU428 VAL429 ALA430 ASP431 SER432 GLU433 GLU434 ASN435 LYS436 ASN437 THR438 ASP439 GLN440 HIS441 LEU442 ALA443 THR444 SER445 ARG446 TRP447 ARG448 LYS449 PHE450 SER451 ARG452 GLU453 TRP454 ILE455 ARG456 THR457 ALA458 LYS459 SER460 ASP461 SER462 LEU463 ASP464 ILE465 SER466 TRP467 LEU468 LYS469 ASP470 LYS471 ASP472 SER473 ILE474 ASP475 ALA476 ASP477 SER478 LEU479 PRO480 GLU481 PRO482 ASP483 VAL484 LEU485 ALA486 ALA487 GLU488 ALA489 MET490 GLY491 GLU492 LEU493 VAL494 GLN495 ALA496 LEU497 SER498 GLU499 LEU500 ASP501 ALA502 LEU503 MET504 ARG505 GLU506 LEU507 GLY508 ALA509 SER510 ASP511 GLU512 ALA513 ASP514 LEU515 GLN516 ARG517 GLN518 LEU519 LEU520 GLU521 GLU522 ALA523 PHE524 GLY525 GLY526 VAL527 LYS528 GLU529
Unit 4 MET1 THR2 TYR3 ASN4 ASN5 VAL6 PHE7 ASP8 HIS9 ALA10 TYR11 GLU12 MET13 LEU14 LYS15 GLU16 ASN17 ILE18 ARG19 TYR20 ASP21 ASP22 ILE23 ARG24 ASP25 THR26 ASP27 ASP28 LEU29 HIS30 ASP31 ALA32 ILE33 HIS34 MET35 ALA36 ALA37 ASP38 ASN39 ALA40 VAL41 PRO42 HIS43 TYR44 TYR45 ALA46 ASP47 ILE48 PHE49 SER50 VAL51 MET52 ALA53 SER54 GLU55 GLY56 ILE57 ASP58 LEU59 GLU60 PHE61 GLU62 ASP63 SER64 GLY65 LEU66 MET67 PRO68 ASP69 THR70 LYS71 ASP72 VAL73 ILE74 ARG75 ILE76 LEU77 GLN78 ALA79 ARG80 ILE81 TYR82 GLU83 GLN84 LEU85 THR86 ILE87 ASP88 LEU89 TRP90 GLU91 ASP92 ALA93 GLU94 ASP95 LEU96 LEU97 ASN98 GLU99 TYR100 LEU101 GLU102 GLU103 VAL104 GLU105 GLU106 TYR107
Unit 5 MET1 THR2 TYR3 ASN4 ASN5 VAL6 PHE7 ASP8 HIS9 ALA10 TYR11 GLU12 MET13 LEU14 LYS15 GLU16 ASN17 ILE18 ARG19 TYR20 ASP21 ASP22 ILE23 ARG24 ASP25 THR26 ASP27 ASP28 LEU29 HIS30 ASP31 ALA32 ILE33 HIS34 MET35 ALA36 ALA37 ASP38 ASN39 ALA40 VAL41 PRO42 HIS43 TYR44 TYR45 ALA46 ASP47 ILE48 PHE49 SER50 VAL51 MET52 ALA53 SER54 GLU55 GLY56 ILE57 ASP58 LEU59 GLU60 PHE61 GLU62 ASP63 SER64 GLY65 LEU66 MET67 PRO68 ASP69 THR70 LYS71 ASP72 VAL73 ILE74 ARG75 ILE76 LEU77 GLN78 ALA79 ARG80 ILE81 TYR82 GLU83 GLN84 LEU85 THR86 ILE87 ASP88 LEU89 TRP90 GLU91 ASP92 ALA93 GLU94 ASP95 LEU96 LEU97 ASN98 GLU99 TYR100 LEU101 GLU102 GLU103 VAL104 GLU105 GLU106

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany