2Y4O - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PAAK2 IN COMPLEX WITH PHENYLACETYL ADEN
• Keywords: LIGASE, PHENYLACETIC ACID DEGRADATION PATHWAY
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2Y4O	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PHENYLACETATE-COENZYME A LIGASE	A	433	3328	0
2	Protein	PHENYLACETATE-COENZYME A LIGASE	B	432	3319	0
3	Ligand	PHENYLACETATE-COENZYME A LIGASE	A	3	0	34
4	Ligand	PHENYLACETATE-COENZYME A LIGASE	B	9	0	70
5	Water			860	0	860
total				1737	6647	964

Proteins

Unit 1

HIS 6 PRO 7 ALA 8 ALA 9 ALA 10 LEU 11 GLU 12 PRO 13 ILE 14 GLU 15 THR 16 ALA 17 SER 18 ARG 19 ASP 20 GLU 21 LEU 22 GLN 23 ALA 24 LEU 25 GLN 26 LEU 27 GLU 28 ARG 29 LEU 30 LYS 31 TRP 32 SER 33 LEU 34 ARG 35 HIS 36 ALA 37 TYR 38 ASP 39 ASN 40 VAL 41 PRO 42 HIS 43 TYR 44 ARG 45 ARG 46 THR 47 PHE 48 ASP 49 ALA 50 ALA 51 GLY 52 VAL 53 HIS 54 PRO 55 ASP 56 ASP 57 LEU 58 LYS 59 SER 60 LEU 61 ALA 62 ASP 63 LEU 64 ALA 65 LYS 66 PHE 67 PRO 68 PHE 69 SER 70 THR 71 LYS 72 ASN 73 ASP 74 LEU 75 ARG 76 ASP 77 ASN 78 TYR 79 PRO 80 PHE 81 GLY 82 LEU 83 PHE 84 ALA 85 VAL 86 PRO 87 ARG 88 GLU 89 GLN 90 VAL 91 VAL 92 ARG 93 VAL 94 HIS 95 ALA 96 SER 97 SER 98 GLY 99 THR 100 THR 101 GLY 102 LYS 103 PRO 104 THR 105 VAL 106 VAL 107 GLY 108 TYR 109 THR 110 ALA 111 ARG 112 ASP 113 ILE 114 ASP 115 THR 116 TRP 117 ALA 118 ASN 119 VAL 120 THR 121 ALA 122 ARG 123 SER 124 ILE 125 ARG 126 ALA 127 ALA 128 GLY 129 GLY 130 ARG 131 PRO 132 GLY 133 ASP 134 THR 135 LEU 136 HIS 137 ASN 138 ALA 139 PHE 140 GLY 141 TYR 142 GLY 143 LEU 144 PHE 145 THR 146 GLY 147 GLY 148 LEU 149 GLY 150 ILE 151 HIS 152 TYR 153 GLY 154 ALA 155 GLU 156 ARG 157 LEU 158 GLY 159 CYS 160 MET 161 VAL 162 VAL 163 PRO 164 MET 165 SER 166 GLY 167 GLY 168 GLN 169 THR 170 GLU 171 LYS 172 GLN 173 VAL 174 GLN 175 LEU 176 ILE 177 ARG 178 ASP 179 PHE 180 GLU 181 PRO 182 LYS 183 ILE 184 ILE 185 LEU 186 VAL 187 THR 188 PRO 189 SER 190 TYR 191 MET 192 LEU 193 ASN 194 LEU 195 ILE 196 ASP 197 GLU 198 MET 199 VAL 200 ARG 201 GLN 202 GLY 203 MET 204 ASP 205 PRO 206 ALA 207 GLU 208 SER 209 SER 210 LEU 211 LYS 212 ILE 213 GLY 214 ILE 215 PHE 216 GLY 217 ALA 218 GLU 219 PRO 220 TRP 221 THR 222 GLN 223 ALA 224 LEU 225 ARG 226 ASN 227 GLU 228 VAL 229 GLU 230 THR 231 ARG 232 VAL 233 GLY 234 ILE 235 ASP 236 ALA 237 LEU 238 ASP 239 ILE 240 TYR 241 GLY 242 LEU 243 SER 244 GLU 245 VAL 246 MET 247 GLY 248 PRO 249 GLY 250 VAL 251 ALA 252 CYS 253 GLU 254 CYS 255 VAL 256 GLU 257 THR 258 LYS 259 ASP 260 GLY 261 PRO 262 VAL 263 ILE 264 TRP 265 GLU 266 ASP 267 HIS 268 PHE 269 TYR 270 PRO 271 GLU 272 ILE 273 ILE 274 ASP 275 PRO 276 VAL 277 THR 278 GLY 279 GLU 280 VAL 281 LEU 282 PRO 283 ASP 284 GLY 285 SER 286 GLN 287 GLY 288 GLU 289 LEU 290 VAL 291 PHE 292 THR 293 SER 294 LEU 295 THR 296 LYS 297 GLU 298 ALA 299 MET 300 PRO 301 VAL 302 ILE 303 ARG 304 TYR 305 ARG 306 THR 307 ARG 308 ASP 309 LEU 310 THR 311 ALA 312 LEU 313 LEU 314 PRO 315 PRO 316 THR 317 ALA 318 ARG 319 ALA 320 MET 321 ARG 322 ARG 323 LEU 324 ALA 325 LYS 326 ILE 327 THR 328 GLY 329 ARG 330 SER 331 ASP 332 ASP 333 MET 334 LEU 335 ILE 336 VAL 337 ARG 338 GLY 339 VAL 340 ASN 341 VAL 342 PHE 343 PRO 344 SER 345 GLN 346 ILE 347 GLU 348 GLU 349 ILE 350 VAL 351 VAL 352 ALA 353 LEU 354 PRO 355 LEU 356 LEU 357 SER 358 GLY 359 GLN 360 PHE 361 GLN 362 ILE 363 THR 364 LEU 365 SER 366 ARG 367 ASP 368 GLY 369 HIS 370 MET 371 ASP 372 ARG 373 LEU 374 ASP 375 LEU 376 ALA 377 VAL 378 GLU 379 LEU 380 ARG 381 SER 382 GLU 383 ALA 384 ALA 385 ALA 386 SER 387 VAL 388 THR 389 ASP 390 GLY 391 GLU 392 ARG 393 ALA 394 ALA 395 LEU 396 ALA 397 ARG 398 GLU 399 LEU 400 GLN 401 HIS 402 ARG 403 ILE 404 LYS 405 THR 406 MET 407 VAL 408 GLY 409 VAL 410 SER 411 SER 412 GLY 413 VAL 414 THR 415 VAL 416 LEU 417 ALA 418 ALA 419 GLY 420 GLY 421 ILE 422 PRO 423 ALA 424 THR 425 ALA 426 THR 427 GLY 428 LYS 429 ALA 430 ARG 431 ARG 432 VAL 433 ILE 434 ASP 435 ARG 436 ARG 437 GLN 438

Unit 2

HIS 6 PRO 7 ALA 8 ALA 9 ALA 10 LEU 11 GLU 12 PRO 13 ILE 14 GLU 15 THR 16 ALA 17 SER 18 ARG 19 ASP 20 GLU 21 LEU 22 GLN 23 ALA 24 LEU 25 GLN 26 LEU 27 GLU 28 ARG 29 LEU 30 LYS 31 TRP 32 SER 33 LEU 34 ARG 35 HIS 36 ALA 37 TYR 38 ASP 39 ASN 40 VAL 41 PRO 42 HIS 43 TYR 44 ARG 45 ARG 46 THR 47 PHE 48 ASP 49 ALA 50 ALA 51 GLY 52 VAL 53 HIS 54 PRO 55 ASP 56 ASP 57 LEU 58 LYS 59 SER 60 LEU 61 ALA 62 ASP 63 LEU 64 ALA 65 LYS 66 PHE 67 PRO 68 PHE 69 SER 70 THR 71 LYS 72 ASN 73 ASP 74 LEU 75 ARG 76 ASP 77 ASN 78 TYR 79 PRO 80 PHE 81 GLY 82 LEU 83 PHE 84 ALA 85 VAL 86 PRO 87 ARG 88 GLU 89 GLN 90 VAL 91 VAL 92 ARG 93 VAL 94 HIS 95 ALA 96 SER 97 SER 98 GLY 99 THR 100 THR 101 GLY 102 LYS 103 PRO 104 THR 105 VAL 106 VAL 107 GLY 108 TYR 109 THR 110 ALA 111 ARG 112 ASP 113 ILE 114 ASP 115 THR 116 TRP 117 ALA 118 ASN 119 VAL 120 THR 121 ALA 122 ARG 123 SER 124 ILE 125 ARG 126 ALA 127 ALA 128 GLY 129 GLY 130 ARG 131 PRO 132 GLY 133 ASP 134 THR 135 LEU 136 HIS 137 ASN 138 ALA 139 PHE 140 GLY 141 TYR 142 GLY 143 LEU 144 PHE 145 THR 146 GLY 147 GLY 148 LEU 149 GLY 150 ILE 151 HIS 152 TYR 153 GLY 154 ALA 155 GLU 156 ARG 157 LEU 158 GLY 159 CYS 160 MET 161 VAL 162 VAL 163 PRO 164 MET 165 SER 166 GLY 167 GLY 168 GLN 169 THR 170 GLU 171 LYS 172 GLN 173 VAL 174 GLN 175 LEU 176 ILE 177 ARG 178 ASP 179 PHE 180 GLU 181 PRO 182 LYS 183 ILE 184 ILE 185 LEU 186 VAL 187 THR 188 PRO 189 SER 190 TYR 191 MET 192 LEU 193 ASN 194 LEU 195 ILE 196 ASP 197 GLU 198 MET 199 VAL 200 ARG 201 GLN 202 GLY 203 MET 204 ASP 205 PRO 206 ALA 207 GLU 208 SER 209 SER 210 LEU 211 LYS 212 ILE 213 GLY 214 ILE 215 PHE 216 GLY 217 ALA 218 GLU 219 PRO 220 TRP 221 THR 222 GLN 223 ALA 224 LEU 225 ARG 226 ASN 227 GLU 228 VAL 229 GLU 230 THR 231 ARG 232 VAL 233 GLY 234 ILE 235 ASP 236 ALA 237 LEU 238 ASP 239 ILE 240 TYR 241 GLY 242 LEU 243 SER 244 GLU 245 VAL 246 MET 247 GLY 248 PRO 249 GLY 250 VAL 251 ALA 252 CYS 253 GLU 254 CYS 255 VAL 256 GLU 257 THR 258 LYS 259 ASP 260 GLY 261 PRO 262 VAL 263 ILE 264 TRP 265 GLU 266 ASP 267 HIS 268 PHE 269 TYR 270 PRO 271 GLU 272 ILE 273 ILE 274 ASP 275 PRO 276 VAL 277 THR 278 GLY 279 GLU 280 VAL 281 LEU 282 PRO 283 ASP 284 GLY 285 SER 286 GLN 287 GLY 288 GLU 289 LEU 290 VAL 291 PHE 292 THR 293 SER 294 LEU 295 THR 296 LYS 297 GLU 298 ALA 299 MET 300 PRO 301 VAL 302 ILE 303 ARG 304 TYR 305 ARG 306 THR 307 ARG 308 ASP 309 LEU 310 THR 311 ALA 312 LEU 313 LEU 314 PRO 315 PRO 316 THR 317 ALA 318 ARG 319 ALA 320 MET 321 ARG 322 ARG 323 LEU 324 ALA 325 LYS 326 ILE 327 THR 328 GLY 329 ARG 330 SER 331 ASP 332 ASP 333 MET 334 LEU 335 ILE 336 VAL 337 ARG 338 GLY 339 VAL 340 ASN 341 VAL 342 PHE 343 PRO 344 SER 345 GLN 346 ILE 347 GLU 348 GLU 349 ILE 350 VAL 351 VAL 352 ALA 353 LEU 354 PRO 355 LEU 356 LEU 357 SER 358 GLY 359 GLN 360 PHE 361 GLN 362 ILE 363 THR 364 LEU 365 SER 366 ARG 367 ASP 368 GLY 369 HIS 370 MET 371 ASP 372 ARG 373 LEU 374 ASP 375 LEU 376 ALA 377 VAL 378 GLU 379 LEU 380 ARG 381 SER 382 GLU 383 ALA 384 ALA 385 ALA 386 SER 387 VAL 388 THR 389 ASP 390 GLY 391 GLU 392 ARG 393 ALA 394 ALA 395 LEU 396 ALA 397 ARG 398 GLU 399 LEU 400 GLN 401 HIS 402 ARG 403 ILE 404 LYS 405 THR 406 MET 407 VAL 408 GLY 409 VAL 410 SER 411 SER 412 GLY 413 VAL 414 THR 415 VAL 416 LEU 417 ALA 418 ALA 419 GLY 420 GLY 421 ILE 422 PRO 423 ALA 424 THR 425 ALA 426 THR 427 GLY 428 LYS 429 ALA 430 ARG 431 ARG 432 VAL 433 ILE 434 ASP 435 ARG 436 ARG 437

Ligands

Unit 3	MG 1439 K 1440 DLL 1441
Unit 4	DLL 1438 PEG 1439 PEG 1440 PEG 1441 PEG 1442 PEG 1443 BME 1444 MG 1445 K 1446