2Y1T - Sequence, Chains, Asymmetric and Biological Units

• Title: BACILLUS SUBTILIS PROPHAGE DUTPASE IN COMPLEX WITH DUDP
• Keywords: HYDROLASE, SPB PROPHAGE, PHE-LID
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2Y1T	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	A	128	1043	0
2	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	B	128	1043	0
3	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	C	125	1017	0
4	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	D	128	1043	0
5	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	E	127	1034	0
6	Protein	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	F	127	1035	0
7	Ligand	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	B	1	0	24
8	Ligand	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	C	1	0	24
9	Ligand	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	D	1	0	24
10	Ligand	SPBC2 PROPHAGE-DERIVED DEOXYURIDINE 5'-TRIPHOSPHA  NUCLEOTIDOHYDROLASE YOSS	E	2	0	48
11	Water			507	0	507
total				1275	6215	627

Proteins

Unit 1	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 LYS 17 MET 18 GLU 19 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128
Unit 2	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 LYS 17 MET 18 GLU 19 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128
Unit 3	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128
Unit 4	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 LYS 17 MET 18 GLU 19 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128
Unit 5	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 LYS 17 MET 18 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128
Unit 6	MET 1 GLN 2 ILE 3 LYS 4 ILE 5 LYS 6 TYR 7 LEU 8 ASP 9 GLU 10 THR 11 GLN 12 THR 13 ARG 14 ILE 15 ASN 16 LYS 17 GLU 19 GLN 20 GLY 21 ASP 22 TRP 23 ILE 24 ASP 25 LEU 26 ARG 27 ALA 28 ALA 29 GLU 30 ASP 31 VAL 32 ALA 33 ILE 34 LYS 35 LYS 36 ASP 37 GLU 38 PHE 39 LYS 40 LEU 41 VAL 42 PRO 43 LEU 44 GLY 45 VAL 46 ALA 47 MET 48 GLU 49 LEU 50 PRO 51 GLU 52 GLY 53 TYR 54 GLU 55 ALA 56 HIS 57 VAL 58 VAL 59 PRO 60 ARG 61 SER 62 SER 63 THR 64 TYR 65 LYS 66 ASN 67 PHE 68 GLY 69 VAL 70 ILE 71 GLN 72 THR 73 ASN 74 SER 75 MET 76 GLY 77 VAL 78 ILE 79 ASP 80 GLU 81 SER 82 TYR 83 LYS 84 GLY 85 ASP 86 ASN 87 ASP 88 PHE 89 TRP 90 PHE 91 PHE 92 PRO 93 ALA 94 TYR 95 ALA 96 LEU 97 ARG 98 ASP 99 THR 100 LYS 101 ILE 102 LYS 103 LYS 104 GLY 105 ASP 106 ARG 107 ILE 108 CYS 109 GLN 110 PHE 111 ARG 112 ILE 113 MET 114 LYS 115 LYS 116 MET 117 PRO 118 ALA 119 VAL 120 ASP 121 LEU 122 ILE 123 GLU 124 VAL 125 ASP 126 ARG 127 LEU 128

Ligands

Unit 7	DUD 143
Unit 8	DUD 143
Unit 9	DUD 143
Unit 10	DUD 143 DUD 144