2Y1L - Sequence, Chains, Asymmetric and Biological Units

• Title: CASPASE-8 IN COMPLEX WITH DARPIN-8.4
• Keywords: HYDROLASE-INHIBITOR COMPLEX, DEVD DARPIN, ANKYRIN REPEAT PRO RIBOSOME DISPLAY, APOPTOSIS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2Y1L	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CASPASE-8	A	150	1193	0
2	Protein	CASPASE-8	B	87	699	0
3	Protein	CASPASE-8	C	148	1178	0
4	Protein	CASPASE-8	D	90	725	0
5	Protein	DARPIN-8.4	E	156	1172	0
6	Protein	DARPIN-8.4	F	156	1172	0
7	Protein	AC-IETD-CHO	G	4	32	0
8	Protein	AC-IETD-CHO	H	4	32	0
9	Ligand	CASPASE-8	A	1	0	5
10	Ligand	CASPASE-8	B	2	0	9
11	Ligand	CASPASE-8	C	1	0	5
12	Ligand	CASPASE-8	D	1	0	4
13	Ligand	DARPIN-8.4	E	1	0	4
14	Ligand	DARPIN-8.4	F	2	0	8
15	Water			685	0	685
total				1488	6203	720

Proteins

Unit 1	LEU 222 ASP 223 LYS 224 VAL 225 TYR 226 GLN 227 MET 228 LYS 229 SER 230 LYS 231 PRO 232 ARG 233 GLY 234 TYR 235 CYS 236 LEU 237 ILE 238 ILE 239 ASN 240 ASN 241 HIS 242 ASN 243 PHE 244 ALA 245 LYS 246 ALA 247 ARG 248 GLU 249 LYS 250 VAL 251 PRO 252 LYS 253 LEU 254 HIS 255 SER 256 ILE 257 ARG 258 ASP 259 ARG 260 ASN 261 GLY 262 THR 263 HIS 264 LEU 265 ASP 266 ALA 267 GLY 268 ALA 269 LEU 270 THR 271 THR 272 THR 273 PHE 274 GLU 275 GLU 276 LEU 277 HIS 278 PHE 279 GLU 280 ILE 281 LYS 282 PRO 283 HIS 284 ASP 285 ASP 286 CYS 287 THR 288 VAL 289 GLU 290 GLN 291 ILE 292 TYR 293 GLU 294 ILE 295 LEU 296 LYS 297 ILE 298 TYR 299 GLN 300 LEU 301 MET 302 ASP 303 HIS 304 SER 305 ASN 306 MET 307 ASP 308 CYS 309 PHE 310 ILE 311 CYS 312 CYS 313 ILE 314 LEU 315 SER 316 HIS 317 GLY 318 ASP 319 LYS 320 GLY 321 ILE 322 ILE 323 TYR 324 GLY 325 THR 326 ASP 327 GLY 328 GLN 329 GLU 330 ALA 331 PRO 332 ILE 333 TYR 334 GLU 335 LEU 336 THR 337 SER 338 GLN 339 PHE 340 THR 341 GLY 342 LEU 343 LYS 344 CYS 345 PRO 346 SER 347 LEU 348 ALA 349 GLY 350 LYS 351 PRO 352 LYS 353 VAL 354 PHE 355 PHE 356 ILE 357 GLN 358 ALA 359 CYS 360 GLN 361 GLY 362 ASP 363 ASN 364 TYR 365 GLN 366 LYS 367 GLY 368 ILE 369 PRO 370 VAL 371
Unit 2	TYR 392 ILE 393 PRO 394 ASP 395 GLU 396 ALA 397 ASP 398 PHE 399 LEU 400 LEU 401 GLY 402 MET 403 ALA 404 THR 405 VAL 406 ASN 407 ASN 408 CYS 409 VAL 410 SER 411 TYR 412 ARG 413 ASN 414 PRO 415 ALA 416 GLU 417 GLY 418 THR 419 TRP 420 TYR 421 ILE 422 GLN 423 SER 424 LEU 425 CYS 426 GLN 427 SER 428 LEU 429 ARG 430 GLU 431 ARG 432 CYS 433 PRO 434 ARG 435 GLY 436 ASP 437 ASP 438 ILE 439 LEU 440 THR 441 ILE 442 LEU 443 THR 444 GLU 445 VAL 446 ASN 447 TYR 448 GLU 449 VAL 450 SER 451 ASN 452 LYS 453 ASP 454 ASP 455 LYS 456 LYS 457 ASN 458 MET 459 GLY 460 LYS 461 GLN 462 MET 463 PRO 464 GLN 465 PRO 466 THR 467 PHE 468 THR 469 LEU 470 ARG 471 LYS 472 LYS 473 LEU 474 VAL 475 PHE 476 PRO 477 SER 478
Unit 3	ASP 223 LYS 224 VAL 225 TYR 226 GLN 227 MET 228 LYS 229 SER 230 LYS 231 PRO 232 ARG 233 GLY 234 TYR 235 CYS 236 LEU 237 ILE 238 ILE 239 ASN 240 ASN 241 HIS 242 ASN 243 PHE 244 ALA 245 LYS 246 ALA 247 ARG 248 GLU 249 LYS 250 VAL 251 PRO 252 LYS 253 LEU 254 HIS 255 SER 256 ILE 257 ARG 258 ASP 259 ARG 260 ASN 261 GLY 262 THR 263 HIS 264 LEU 265 ASP 266 ALA 267 GLY 268 ALA 269 LEU 270 THR 271 THR 272 THR 273 PHE 274 GLU 275 GLU 276 LEU 277 HIS 278 PHE 279 GLU 280 ILE 281 LYS 282 PRO 283 HIS 284 ASP 285 ASP 286 CYS 287 THR 288 VAL 289 GLU 290 GLN 291 ILE 292 TYR 293 GLU 294 ILE 295 LEU 296 LYS 297 ILE 298 TYR 299 GLN 300 LEU 301 MET 302 ASP 303 HIS 304 SER 305 ASN 306 MET 307 ASP 308 CYS 309 PHE 310 ILE 311 CYS 312 CYS 313 ILE 314 LEU 315 SER 316 HIS 317 GLY 318 ASP 319 LYS 320 GLY 321 ILE 322 ILE 323 TYR 324 GLY 325 THR 326 ASP 327 GLY 328 GLN 329 GLU 330 ALA 331 PRO 332 ILE 333 TYR 334 GLU 335 LEU 336 THR 337 SER 338 GLN 339 PHE 340 THR 341 GLY 342 LEU 343 LYS 344 CYS 345 PRO 346 SER 347 LEU 348 ALA 349 GLY 350 LYS 351 PRO 352 LYS 353 VAL 354 PHE 355 PHE 356 ILE 357 GLN 358 ALA 359 CYS 360 GLN 361 GLY 362 ASP 363 ASN 364 TYR 365 GLN 366 LYS 367 GLY 368 ILE 369 PRO 370
Unit 4	THR 390 ARG 391 TYR 392 ILE 393 PRO 394 ASP 395 GLU 396 ALA 397 ASP 398 PHE 399 LEU 400 LEU 401 GLY 402 MET 403 ALA 404 THR 405 VAL 406 ASN 407 ASN 408 CYS 409 VAL 410 SER 411 TYR 412 ARG 413 ASN 414 PRO 415 ALA 416 GLU 417 GLY 418 THR 419 TRP 420 TYR 421 ILE 422 GLN 423 SER 424 LEU 425 CYS 426 GLN 427 SER 428 LEU 429 ARG 430 GLU 431 ARG 432 CYS 433 PRO 434 ARG 435 GLY 436 ASP 437 ASP 438 ILE 439 LEU 440 THR 441 ILE 442 LEU 443 THR 444 GLU 445 VAL 446 ASN 447 TYR 448 GLU 449 VAL 450 SER 451 ASN 452 LYS 453 ASP 454 ASP 455 LYS 456 LYS 457 ASN 458 MET 459 GLY 460 LYS 461 GLN 462 MET 463 PRO 464 GLN 465 PRO 466 THR 467 PHE 468 THR 469 LEU 470 ARG 471 LYS 472 LYS 473 LEU 474 VAL 475 PHE 476 PRO 477 SER 478 ASP 479
Unit 5	ASP 13 LEU 14 GLY 15 LYS 16 LYS 17 LEU 18 LEU 19 GLU 20 ALA 21 ALA 22 ARG 23 ALA 24 GLY 25 ARG 26 ASP 27 ASP 28 GLU 29 VAL 30 ARG 31 ILE 32 LEU 33 MET 34 ALA 35 ASN 36 GLY 37 ALA 38 ASP 39 VAL 40 ASN 41 ALA 42 GLU 43 ASP 44 ALA 45 SER 46 GLY 47 TRP 48 THR 49 PRO 50 LEU 51 HIS 52 LEU 53 ALA 54 ALA 55 PHE 56 ASN 57 GLY 58 HIS 59 LEU 60 GLU 61 ILE 62 VAL 63 GLU 64 VAL 65 LEU 66 LEU 67 LYS 68 ASN 69 GLY 70 ALA 71 ASP 72 VAL 73 ASN 74 ALA 75 VAL 76 ASP 77 HIS 78 ALA 79 GLY 80 MET 81 THR 82 PRO 83 LEU 84 ARG 85 LEU 86 ALA 87 ALA 88 LEU 89 PHE 90 GLY 91 HIS 92 LEU 93 GLU 94 ILE 95 VAL 96 GLU 97 VAL 98 LEU 99 LEU 100 LYS 101 ASN 102 GLY 103 ALA 104 ASP 105 VAL 106 ASN 107 ALA 108 ASN 109 ASP 110 MET 111 GLU 112 GLY 113 HIS 114 THR 115 PRO 116 LEU 117 HIS 118 LEU 119 ALA 120 ALA 121 MET 122 PHE 123 GLY 124 HIS 125 LEU 126 GLU 127 ILE 128 VAL 129 GLU 130 VAL 131 LEU 132 LEU 133 LYS 134 ASN 135 GLY 136 ALA 137 ASP 138 VAL 139 ASN 140 ALA 141 GLN 142 ASP 143 LYS 144 PHE 145 GLY 146 LYS 147 THR 148 ALA 149 PHE 150 ASP 151 ILE 152 SER 153 ILE 154 ASP 155 ASN 156 GLY 157 ASN 158 GLU 159 ASP 160 LEU 161 ALA 162 GLU 163 ILE 164 LEU 165 GLN 166 LYS 167 LEU 168
Unit 6	ASP 13 LEU 14 GLY 15 LYS 16 LYS 17 LEU 18 LEU 19 GLU 20 ALA 21 ALA 22 ARG 23 ALA 24 GLY 25 ARG 26 ASP 27 ASP 28 GLU 29 VAL 30 ARG 31 ILE 32 LEU 33 MET 34 ALA 35 ASN 36 GLY 37 ALA 38 ASP 39 VAL 40 ASN 41 ALA 42 GLU 43 ASP 44 ALA 45 SER 46 GLY 47 TRP 48 THR 49 PRO 50 LEU 51 HIS 52 LEU 53 ALA 54 ALA 55 PHE 56 ASN 57 GLY 58 HIS 59 LEU 60 GLU 61 ILE 62 VAL 63 GLU 64 VAL 65 LEU 66 LEU 67 LYS 68 ASN 69 GLY 70 ALA 71 ASP 72 VAL 73 ASN 74 ALA 75 VAL 76 ASP 77 HIS 78 ALA 79 GLY 80 MET 81 THR 82 PRO 83 LEU 84 ARG 85 LEU 86 ALA 87 ALA 88 LEU 89 PHE 90 GLY 91 HIS 92 LEU 93 GLU 94 ILE 95 VAL 96 GLU 97 VAL 98 LEU 99 LEU 100 LYS 101 ASN 102 GLY 103 ALA 104 ASP 105 VAL 106 ASN 107 ALA 108 ASN 109 ASP 110 MET 111 GLU 112 GLY 113 HIS 114 THR 115 PRO 116 LEU 117 HIS 118 LEU 119 ALA 120 ALA 121 MET 122 PHE 123 GLY 124 HIS 125 LEU 126 GLU 127 ILE 128 VAL 129 GLU 130 VAL 131 LEU 132 LEU 133 LYS 134 ASN 135 GLY 136 ALA 137 ASP 138 VAL 139 ASN 140 ALA 141 GLN 142 ASP 143 LYS 144 PHE 145 GLY 146 LYS 147 THR 148 ALA 149 PHE 150 ASP 151 ILE 152 SER 153 ILE 154 ASP 155 ASN 156 GLY 157 ASN 158 GLU 159 ASP 160 LEU 161 ALA 162 GLU 163 ILE 164 LEU 165 GLN 166 LYS 167 LEU 168
Unit 7	ILE 1 GLU 2 THR 3 ASP 4
Unit 8	ILE 1 GLU 2 THR 3 ASP 4

Ligands

Unit 9	SO4 1372
Unit 10	EDO 1479 SO4 1480
Unit 11	SO4 1371
Unit 12	EDO 1480
Unit 13	EDO 1169
Unit 14	EDO 1169 EDO 1170