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| Title | CRYSTAL STRUCTURE OF THE HUMAN JMJD3 JUMONJI DOMAIN | |
| Keywords | OXIDOREDUCTASE, HISTONE DEMETHYLATION, OXYGENASE, CHROMATIN MODIFICATION | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2XXZ | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | LYSINE-SPECIFIC DEMETHYLASE 6B | A | 292 | 2325 | 0 |
| 2 | Protein | LYSINE-SPECIFIC DEMETHYLASE 6B | B | 286 | 2287 | 0 |
| 3 | Ligand | LYSINE-SPECIFIC DEMETHYLASE 6B | A | 8 | 0 | 33 |
| 4 | Ligand | LYSINE-SPECIFIC DEMETHYLASE 6B | B | 3 | 0 | 19 |
| 5 | Water | 319 | 0 | 319 | ||
| total | 908 | 4612 | 371 |
| Unit 1 | ARG1175 GLU1176 LYS1177 LEU1178 ASN1179 PRO1180 PRO1181 THR1182 PRO1183 SER1184 ILE1185 TYR1186 LEU1187 GLU1188 SER1189 LYS1190 ARG1191 ASP1192 ALA1193 PHE1194 SER1195 PRO1196 VAL1197 LEU1198 LEU1199 GLN1200 PHE1201 CYS1202 THR1203 ASP1204 PRO1205 ARG1206 ASN1207 PRO1208 ILE1209 THR1210 VAL1211 ILE1212 ARG1213 GLY1214 LEU1215 ALA1216 GLY1217 SER1218 LEU1219 ARG1220 LEU1221 ASN1222 LEU1223 GLY1224 LEU1225 PHE1226 SER1227 THR1228 LYS1229 THR1230 LEU1231 VAL1232 GLU1233 ALA1234 SER1235 GLY1236 GLU1237 HIS1238 THR1239 VAL1240 GLU1241 VAL1242 ARG1243 THR1244 GLN1245 VAL1246 GLN1247 GLN1248 PRO1249 SER1250 ASP1251 GLU1252 ASN1253 TRP1254 ASP1255 LEU1256 THR1257 GLY1258 THR1259 ARG1260 GLN1261 ILE1262 TRP1263 PRO1264 CYS1265 GLU1266 SER1267 SER1268 ARG1269 SER1270 HIS1271 THR1272 THR1273 ILE1274 ALA1275 LYS1276 TYR1277 ALA1278 GLN1279 TYR1280 GLN1281 ALA1282 SER1283 SER1284 PHE1285 GLN1286 GLU1287 SER1288 LEU1289 GLN1290 GLU1291 GLU1292 HIS1320 HIS1321 ILE1322 ILE1323 LYS1324 PHE1325 GLY1326 THR1327 ASN1328 ILE1329 ASP1330 LEU1331 SER1332 ASP1333 ALA1334 LYS1335 ARG1336 TRP1337 LYS1338 PRO1339 GLN1340 LEU1341 GLN1342 GLU1343 LEU1344 LEU1345 LYS1346 LEU1347 PRO1348 ALA1349 PHE1350 MET1351 ARG1352 VAL1353 THR1354 SER1355 THR1356 GLY1357 ASN1358 MET1359 LEU1360 SER1361 HIS1362 VAL1363 GLY1364 HIS1365 THR1366 ILE1367 LEU1368 GLY1369 MET1370 ASN1371 THR1372 VAL1373 GLN1374 LEU1375 TYR1376 MET1377 LYS1378 VAL1379 PRO1380 GLY1381 SER1382 ARG1383 THR1384 PRO1385 GLY1386 HIS1387 GLN1388 GLU1389 ASN1390 ASN1391 ASN1392 PHE1393 CYS1394 SER1395 VAL1396 ASN1397 ILE1398 ASN1399 ILE1400 GLY1401 PRO1402 GLY1403 ASP1404 CYS1405 GLU1406 TRP1407 PHE1408 ALA1409 VAL1410 HIS1411 GLU1412 HIS1413 TYR1414 TRP1415 GLU1416 THR1417 ILE1418 SER1419 ALA1420 PHE1421 CYS1422 ASP1423 ARG1424 HIS1425 GLY1426 VAL1427 ASP1428 TYR1429 LEU1430 THR1431 GLY1432 SER1433 TRP1434 TRP1435 PRO1436 ILE1437 LEU1438 ASP1439 ASP1440 LEU1441 TYR1442 ALA1443 SER1444 ASN1445 ILE1446 PRO1447 VAL1448 TYR1449 ARG1450 PHE1451 VAL1452 GLN1453 ARG1454 PRO1455 GLY1456 ASP1457 LEU1458 VAL1459 TRP1460 ILE1461 ASN1462 ALA1463 GLY1464 THR1465 VAL1466 HIS1467 TRP1468 VAL1469 GLN1470 ALA1471 THR1472 GLY1473 TRP1474 CYS1475 ASN1476 ASN1477 ILE1478 ALA1479 TRP1480 ASN1481 VAL1482 GLY1483 PRO1484 LEU1485 THR1486 ALA1487 TYR1488 GLN1489 TYR1490 GLN1491 LEU1492 ALA1493 |
| Unit 2 | ARG1175 GLU1176 LYS1177 LEU1178 ASN1179 PRO1180 PRO1181 THR1182 PRO1183 SER1184 ILE1185 TYR1186 LEU1187 GLU1188 SER1189 LYS1190 ARG1191 ASP1192 ALA1193 PHE1194 SER1195 PRO1196 VAL1197 LEU1198 LEU1199 GLN1200 PHE1201 CYS1202 THR1203 ASP1204 PRO1205 ARG1206 ASN1207 PRO1208 ILE1209 THR1210 VAL1211 ILE1212 ARG1213 GLY1214 LEU1215 ALA1216 GLY1217 SER1218 LEU1219 ARG1220 LEU1221 ASN1222 LEU1223 GLY1224 LEU1225 PHE1226 SER1227 THR1228 LYS1229 THR1230 LEU1231 VAL1232 GLU1233 ALA1234 SER1235 GLY1236 GLU1237 HIS1238 THR1239 VAL1240 GLU1241 VAL1242 ARG1243 THR1244 GLN1245 VAL1246 GLN1247 GLN1248 PRO1249 SER1250 ASP1251 GLU1252 ASN1253 TRP1254 ASP1255 LEU1256 THR1257 GLY1258 THR1259 ARG1260 GLN1261 ILE1262 TRP1263 PRO1264 CYS1265 GLU1266 SER1267 SER1268 ARG1269 SER1270 HIS1271 THR1272 THR1273 ILE1274 ALA1275 LYS1276 TYR1277 ALA1278 GLN1279 TYR1280 GLN1281 ALA1282 SER1283 SER1284 PHE1285 GLN1286 GLU1287 SER1288 LEU1289 GLN1290 HIS1320 HIS1321 ILE1322 ILE1323 LYS1324 PHE1325 GLY1326 THR1327 ASN1328 ILE1329 ASP1330 LEU1331 SER1332 ASP1333 ALA1334 LYS1335 ARG1336 TRP1337 LYS1338 PRO1339 GLN1340 LEU1341 GLN1342 GLU1343 LEU1344 LEU1345 LYS1346 LEU1347 PRO1348 ALA1349 PHE1350 MET1351 ARG1352 VAL1353 THR1354 SER1355 THR1356 ILE1367 LEU1368 GLY1369 MET1370 ASN1371 THR1372 VAL1373 GLN1374 LEU1375 TYR1376 MET1377 LYS1378 VAL1379 PRO1380 GLY1381 SER1382 ARG1383 THR1384 PRO1385 GLY1386 HIS1387 GLN1388 GLU1389 ASN1390 ASN1391 ASN1392 PHE1393 CYS1394 SER1395 VAL1396 ASN1397 ILE1398 ASN1399 ILE1400 GLY1401 PRO1402 GLY1403 ASP1404 CYS1405 GLU1406 TRP1407 PHE1408 ALA1409 VAL1410 HIS1411 GLU1412 HIS1413 TYR1414 TRP1415 GLU1416 THR1417 ILE1418 SER1419 ALA1420 PHE1421 CYS1422 ASP1423 ARG1424 HIS1425 GLY1426 VAL1427 ASP1428 TYR1429 LEU1430 THR1431 GLY1432 SER1433 TRP1434 TRP1435 PRO1436 ILE1437 LEU1438 ASP1439 ASP1440 LEU1441 TYR1442 ALA1443 SER1444 ASN1445 ILE1446 PRO1447 VAL1448 TYR1449 ARG1450 PHE1451 VAL1452 GLN1453 ARG1454 PRO1455 GLY1456 ASP1457 LEU1458 VAL1459 TRP1460 ILE1461 ASN1462 ALA1463 GLY1464 THR1465 VAL1466 HIS1467 TRP1468 VAL1469 GLN1470 ALA1471 THR1472 GLY1473 TRP1474 CYS1475 ASN1476 ASN1477 ILE1478 ALA1479 TRP1480 ASN1481 VAL1482 GLY1483 PRO1484 LEU1485 THR1486 ALA1487 TYR1488 GLN1489 TYR1490 GLN1491 LEU1492 ALA1493 LEU1494 GLU1495 ARG1496 TYR1497 GLU1498 TRP1499 |
| Unit 3 | NI2494 NA2495 EDO2496 EDO2497 EDO2498 EDO2499 NI2500 8XQ3001 |
| Unit 4 | NI2500 EDO2501 8XQ3001 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |