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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE TERNARY COMPLEX BETWEEN HUMAN T CEL RECEPTOR, STAPHYLOCOCCAL ENTEROTOXIN H AND HUMAN MAJOR HISTOCOMPATIBILITY COMPLEX CLASS II
Keywords IMMUNE SYSTEM, SUPERANTIGEN, IMMUNORECEPTORS, TERNARY COMPLE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2XN9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  A 199 1511 0
2  Protein   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  B 242 1934 0
3  Protein   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  C 215 1748 0
4  Protein    D 178 1453 0
5  Protein    E 188 1515 0
6  Protein   HEMAGGLUTININ  F 13 105 0
7  Ligand   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  A 1 0 6
8  Ligand   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  B 3 0 18
9  Ligand   T CELL RECEPTOR ALPHA CHAIN C REGIONT CELL RECEPTOR BETA-1 CHAIN C REGIONENTEROTOXIN H  C 1 0 1
10 Water     280 0 280
total       1320 8266 305

Proteins
Unit 1 GLN2 LEU3 LEU4 GLU5 GLN6 SER7 PRO8 GLN9 PHE10 LEU11 SER12 ILE13 GLN14 GLU15 GLY16 GLU17 ASN18 LEU19 THR20 VAL21 TYR22 CYS23 ASN24 SER25 SER26 SER27 VAL28 PHE29 SER30 SER31 LEU32 GLN33 TRP34 TYR35 ARG36 GLN37 GLU38 PRO39 GLY40 GLU41 GLY42 PRO43 VAL44 LEU45 LEU46 VAL47 THR48 VAL49 VAL50 THR51 GLY52 GLY53 GLU54 VAL55 LYS56 LYS57 LEU58 LYS59 ARG60 LEU61 THR62 PHE63 GLN64 PHE65 GLY66 ASP67 ALA68 ARG69 LYS70 ASP71 SER72 SER73 LEU74 HIS75 ILE76 THR77 ALA78 ALA79 GLN80 PRO81 GLY82 ASP83 THR84 GLY85 LEU86 TYR87 LEU88 CYS89 ALA90 GLY91 ALA92 GLY93 SER94 GLN95 GLY96 ASN97 LEU98 ILE99 PHE100 GLY101 LYS102 GLY103 THR104 LYS105 LEU106 SER107 VAL108 LYS109 PRO110 ASN111 ILE112 GLN113 ASN114 PRO115 ASP116 PRO117 ALA118 VAL119 TYR120 GLN121 LEU122 ARG123 ASP124 SER125 LYS126 SER127 SER128 ASP129 LYS130 SER131 VAL132 CYS133 LEU134 PHE135 THR136 ASP137 PHE138 ASP139 SER140 GLN141 THR142 ASN143 VAL144 SER145 GLN146 SER147 LYS148 ASP149 SER150 ASP151 VAL152 TYR153 ILE154 THR155 ASP156 LYS157 CYS158 VAL159 LEU160 ASP161 MET162 ARG163 SER164 MET165 ASP166 PHE167 LYS168 SER169 ASN170 SER171 ALA172 VAL173 ALA174 TRP175 SER176 ASN177 LYS178 SER179 ASP180 PHE181 ALA182 CYS183 ALA184 ASN185 ALA186 PHE187 ASN188 ASN189 SER190 ILE191 ILE192 PRO193 GLU194 ASP195 THR196 PHE197 PHE198 PRO199 SER200
Unit 2 ASP3 GLY4 GLY5 ILE6 THR7 GLN8 SER9 PRO10 LYS11 TYR12 LEU13 PHE14 ARG15 LYS16 GLU17 GLY18 GLN19 ASN20 VAL21 THR22 LEU23 SER24 CYS25 GLU26 GLN27 ASN28 LEU29 ASN30 HIS31 ASP32 ALA33 MET34 TYR35 TRP36 TYR37 ARG38 GLN39 ASP40 PRO41 GLY42 GLN43 GLY44 LEU45 ARG46 LEU47 ILE48 TYR49 TYR50 SER51 GLN52 ILE53 VAL54 ASN55 ASP56 PHE57 GLN58 LYS59 GLY60 ASP61 ILE62 ALA63 GLU64 GLY65 TYR66 SER67 VAL68 SER69 ARG70 GLU71 LYS72 LYS73 GLU74 SER75 PHE76 PRO77 LEU78 THR79 VAL80 THR81 SER82 ALA83 GLN84 LYS85 ASN86 PRO87 THR88 ALA89 PHE90 TYR91 LEU92 CYS93 ALA94 SER95 SER96 SER97 ARG98 SER99 SER100 TYR101 GLU102 GLN103 TYR104 PHE105 GLY106 PRO107 GLY108 THR109 ARG110 LEU111 THR112 VAL113 THR114 GLU115 ASP116 LEU117 LYS118 ASN119 VAL120 PHE121 PRO122 PRO123 GLU124 VAL125 ALA126 VAL127 PHE128 GLU129 PRO130 SER131 GLU132 ALA133 GLU134 ILE135 SER136 HIS137 THR138 GLN139 LYS140 ALA141 THR142 LEU143 VAL144 CYS145 LEU146 ALA147 THR148 GLY149 PHE150 TYR151 PRO152 ASP153 HIS154 VAL155 GLU156 LEU157 SER158 TRP159 TRP160 VAL161 ASN162 GLY163 LYS164 GLU165 VAL166 HIS167 SER168 GLY169 VAL170 CYS171 THR172 ASP173 PRO174 GLN175 PRO176 LEU177 LYS178 GLU179 GLN180 PRO181 ALA182 LEU183 ASN184 ASP185 SER186 ARG187 TYR188 SER189 LEU190 SER191 SER192 ARG193 LEU194 ARG195 VAL196 SER197 ALA198 THR199 PHE200 TRP201 GLN202 ASN203 PRO204 ARG205 ASN206 HIS207 PHE208 ARG209 CYS210 GLN211 VAL212 GLN213 PHE214 TYR215 GLY216 LEU217 SER218 GLU219 ASN220 ASP221 GLU222 TRP223 THR224 GLN225 ASP226 ARG227 ALA228 LYS229 PRO230 VAL231 THR232 GLN233 ILE234 VAL235 SER236 ALA237 GLU238 ALA239 TRP240 GLY241 ARG242 ALA243 ASP244
Unit 3 GLU1 ASP2 LEU3 HIS4 ASP5 LYS6 SER7 GLU8 LEU9 THR10 ASP11 LEU12 ALA13 LEU14 ALA15 ASN16 ALA17 TYR18 GLY19 GLN20 TYR21 ASN22 HIS23 PRO24 PHE25 ILE26 LYS27 GLU28 ASN29 ILE30 LYS31 SER32 ASP33 GLU34 ILE35 SER36 GLY37 GLU38 LYS39 ASP40 LEU41 ILE42 PHE43 ARG44 ASN45 GLN46 GLY47 ASP48 SER49 GLY50 ASN51 ASP52 LEU53 ARG54 VAL55 LYS56 PHE57 ALA58 THR59 ALA60 ASP61 LEU62 ALA63 GLN64 LYS65 PHE66 LYS67 ASN68 LYS69 ASN70 VAL71 ASP72 ILE73 TYR74 GLY75 ALA76 SER77 PHE78 TYR79 TYR80 LYS81 CYS82 GLU83 LYS84 ILE85 SER86 GLU87 ASN88 ILE89 SER90 GLU91 CYS92 LEU93 TYR94 GLY95 GLY96 THR97 THR98 LEU99 ASN100 SER101 GLU102 LYS103 LEU104 ALA105 GLN106 GLU107 ARG108 VAL109 ILE110 GLY111 ALA112 ASN113 VAL114 TRP115 VAL116 ASP117 GLY118 ILE119 GLN120 LYS121 GLU122 THR123 GLU124 LEU125 ILE126 ARG127 THR128 ASN129 LYS130 LYS131 ASN132 VAL133 THR134 LEU135 GLN136 GLU137 LEU138 ASP139 ILE140 LYS141 ILE142 ARG143 LYS144 ILE145 LEU146 SER147 ASP148 LYS149 TYR150 LYS151 ILE152 TYR153 TYR154 LYS155 ASP156 SER157 GLU158 ILE159 SER160 LYS161 GLY162 LEU163 ILE164 GLU165 PHE166 ASP167 MET168 LYS169 THR170 PRO171 ARG172 ASP173 TYR174 SER175 PHE176 ASP177 ILE178 TYR179 ASP180 LEU181 LYS182 GLY183 GLU184 ASN185 ASP186 TYR187 GLU188 ILE189 ASP190 LYS191 ILE192 TYR193 GLU194 ASP195 ASN196 LYS197 THR198 LEU199 LYS200 SER201 ASP202 ASP203 ILE204 SER205 HIS206 ILE207 ASP208 VAL209 ASN210 LEU211 TYR212 THR213 LYS214 LYS215
Unit 4 GLU4 HIS5 VAL6 ILE7 ILE8 GLN9 ALA10 GLU11 PHE12 TYR13 LEU14 ASN15 PRO16 ASP17 GLN18 SER19 GLY20 GLU21 PHE22 MET23 PHE24 ASP25 PHE26 ASP27 GLY28 ASP29 GLU30 ILE31 PHE32 HIS33 VAL34 ASP35 MET36 ALA37 LYS38 LYS39 GLU40 THR41 VAL42 TRP43 ARG44 LEU45 GLU46 GLU47 PHE48 GLY49 ARG50 PHE51 ALA52 SER53 PHE54 GLU55 ALA56 GLN57 GLY58 ALA59 LEU60 ALA61 ASN62 ILE63 ALA64 VAL65 ASP66 LYS67 ALA68 ASN69 LEU70 GLU71 ILE72 MET73 THR74 LYS75 ARG76 SER77 ASN78 TYR79 THR80 PRO81 ILE82 THR83 ASN84 VAL85 PRO86 PRO87 GLU88 VAL89 THR90 VAL91 LEU92 THR93 ASN94 SER95 PRO96 VAL97 GLU98 LEU99 ARG100 GLU101 PRO102 ASN103 VAL104 LEU105 ILE106 CYS107 PHE108 ILE109 ASP110 LYS111 PHE112 THR113 PRO114 PRO115 VAL116 VAL117 ASN118 VAL119 THR120 TRP121 LEU122 ARG123 ASN124 GLY125 LYS126 PRO127 VAL128 THR129 THR130 GLY131 VAL132 SER133 GLU134 THR135 VAL136 PHE137 LEU138 PRO139 ARG140 GLU141 ASP142 HIS143 LEU144 PHE145 ARG146 LYS147 PHE148 HIS149 TYR150 LEU151 PRO152 PHE153 LEU154 PRO155 SER156 THR157 GLU158 ASP159 VAL160 TYR161 ASP162 CYS163 ARG164 VAL165 GLU166 HIS167 TRP168 GLY169 LEU170 ASP171 GLU172 PRO173 LEU174 LEU175 LYS176 HIS177 TRP178 GLU179 PHE180 ASP181
Unit 5 ASP2 THR3 ARG4 PRO5 ARG6 PHE7 LEU8 TRP9 GLN10 LEU11 LYS12 PHE13 GLU14 CYS15 HIS16 PHE17 PHE18 ASN19 GLY20 THR21 GLU22 ARG23 VAL24 ARG25 LEU26 LEU27 GLU28 ARG29 CYS30 ILE31 TYR32 ASN33 GLN34 GLU35 GLU36 SER37 VAL38 ARG39 PHE40 ASP41 SER42 ASP43 VAL44 GLY45 GLU46 TYR47 ARG48 ALA49 VAL50 THR51 GLU52 LEU53 GLY54 ARG55 PRO56 ASP57 ALA58 GLU59 TYR60 TRP61 ASN62 SER63 GLN64 LYS65 ASP66 LEU67 LEU68 GLU69 GLN70 ARG71 ARG72 ALA73 ALA74 VAL75 ASP76 THR77 TYR78 CYS79 ARG80 HIS81 ASN82 TYR83 GLY84 VAL85 GLY86 GLU87 SER88 PHE89 THR90 VAL91 GLN92 ARG93 ARG94 VAL95 GLU96 PRO97 LYS98 VAL99 THR100 VAL101 TYR102 PRO103 SER104 LYS105 THR106 GLN107 PRO108 LEU109 GLN110 HIS111 HIS112 ASN113 LEU114 LEU115 VAL116 CYS117 SER118 VAL119 SER120 GLY121 PHE122 TYR123 PRO124 GLY125 SER126 ILE127 GLU128 VAL129 ARG130 TRP131 PHE132 ARG133 ASN134 GLY135 GLN136 GLU137 GLU138 LYS139 ALA140 GLY141 VAL142 VAL143 SER144 THR145 GLY146 LEU147 ILE148 GLN149 ASN150 GLY151 ASP152 TRP153 THR154 PHE155 GLN156 THR157 LEU158 VAL159 MET160 LEU161 GLU162 THR163 VAL164 PRO165 ARG166 SER167 GLY168 GLU169 VAL170 TYR171 THR172 CYS173 GLN174 VAL175 GLU176 HIS177 PRO178 SER179 VAL180 THR181 SER182 PRO183 LEU184 THR185 VAL186 GLU187 TRP188 ARG189
Unit 6 PRO1 LYS2 TYR3 VAL4 LYS5 GLN6 ASN7 THR8 LEU9 LYS10 LEU11 ALA12 THR13

Ligands
Unit 7 GOL1201
Unit 8 GOL1245 GOL1246 GOL1247
Unit 9 NA1216

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany