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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, AND A. BAUMANNII TOP (PARE-PARC FUSION TRUNCATE)
Keywords ISOMERASE-DNA-ANTIBIOTIC COMPLEX, TYPE IIA TOPOISOMERASE, QU ANTIBACTERIAL AGENT
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2XKK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TOPOISOMERASE IV  A 692 5222 16
2  Protein   TOPOISOMERASE IV  C 711 5437 16
3  Other macromolecule   DNA  E 26 534 0
4  Other macromolecule   DNA  F 26 524 0
5  Ligand   TOPOISOMERASE IV  A 2 0 2
6  Ligand   TOPOISOMERASE IV  C 2 0 2
7  Ligand   DNA  E 1 0 29
8  Ligand   DNA  F 1 0 29
9 Water     40 0 40
total       1501 11717 134
Proteins
Unit 1 ALA373 LEU374 PRO375 GLY376 LYS377 LEU378 THR385 ARG386 GLU387 GLU388 SER389 GLU390 LEU391 PHE392 ILE393 VAL394 GLU395 GLY396 ASP397 SER398 ALA399 GLY400 GLY401 SER402 ALA403 LYS404 GLN405 ALA406 ARG407 ASP408 LYS409 ASN410 PHE411 GLN412 ALA413 ILE414 MET415 PRO416 ILE417 ARG418 GLY419 LYS420 ILE421 LEU422 ASN423 THR424 TRP425 GLU426 VAL427 SER428 SER429 ASP430 GLU431 VAL432 LEU433 ALA434 SER435 GLN436 GLU437 VAL438 HIS439 ASP440 ILE441 ALA442 ILE443 ALA444 ILE445 GLY446 VAL447 ASP448 PRO449 GLY450 SER451 ASP452 ASP453 LEU454 SER455 GLU456 LEU457 ARG458 TYR459 GLY460 LYS461 ILE462 CYS463 ILE464 LEU465 ALA466 ASP467 ALA468 ASP469 SER470 ASP471 GLY472 LEU473 HIS474 ILE475 ALA476 THR477 LEU478 LEU479 CYS480 ALA481 LEU482 PHE483 VAL484 LYS485 HIS486 PHE487 PRO488 ALA489 LEU490 VAL491 GLU492 GLU493 GLY494 HIS495 LEU496 TYR497 VAL498 ALA499 MET500 PRO501 PRO502 LEU503 PHE504 ARG505 ILE506 ASP507 ILE508 GLY509 LYS510 ASP511 VAL512 HIS513 TYR514 ALA515 LEU516 ASP517 ASP518 GLU519 GLU520 LEU521 GLU522 THR523 ILE524 LEU525 LYS526 ASN527 VAL528 LYS532 ASN533 PRO534 GLN535 ILE536 THR537 ARG538 PHE539 LYS540 GLY541 LEU542 GLY543 GLU544 MET545 ASN546 ALA547 ILE548 GLN549 LEU550 ARG551 GLU552 THR553 THR554 MET555 ASP556 PRO557 ASN558 THR559 ARG560 ARG561 LEU562 VAL563 GLN564 LEU565 ASP566 LEU567 ASP568 ASP569 ALA570 HIS571 LEU572 THR573 ALA574 GLY575 LEU576 LEU577 ASP578 LYS579 LEU580 LEU581 ALA582 LYS583 LYS584 ARG585 ALA586 ALA587 ASP588 ARG589 LYS590 GLN591 TRP592 LEU593 GLU594 GLN595 LYS596 GLU1010 ASN1011 ARG1012 SER1013 VAL1014 ALA1015 GLU1016 PHE1017 THR1018 GLU1019 GLN1020 ALA1021 TYR1022 LEU1023 ASN1024 TYR1025 ALA1026 MET1027 TYR1028 VAL1029 ILE1030 MET1031 ASP1032 ARG1033 ALA1034 LEU1035 PRO1036 HIS1037 ILE1038 SER1039 ASP1040 GLY1041 LEU1042 LYS1043 PRO1044 VAL1045 GLN1046 ARG1047 ARG1048 ILE1049 VAL1050 TYR1051 ALA1052 MET1053 SER1054 GLU1055 LEU1056 GLY1057 LEU1058 LYS1059 SER1060 SER1061 GLY1062 LYS1063 PRO1064 LYS1065 LYS1066 SER1067 ALA1068 ARG1069 THR1070 VAL1071 GLY1072 ASP1073 VAL1074 LEU1075 GLY1076 LYS1077 TYR1078 HIS1079 PRO1080 HIS1081 GLY1082 ASP1083 SER1084 ALA1085 CYS1086 TYR1087 GLU1088 ALA1089 MET1090 VAL1091 LEU1092 MET1093 ALA1094 GLN1095 PRO1096 PHE1097 SER1098 TYR1099 ARG1100 TYR1101 PRO1102 LEU1103 ILE1104 GLU1105 GLY1106 GLN1107 GLY1108 ASN1109 TRP1110 GLY1111 SER1112 PRO1113 ASP1114 ASP1115 PRO1116 LYS1117 SER1118 PHE1119 ALA1120 ALA1121 MET1122 ARG1123 PTR1124 THR1125 GLU1126 ALA1127 LYS1128 LEU1129 SER1130 ALA1131 TYR1132 SER1133 GLU1134 LEU1135 LEU1136 LEU1137 SER1138 GLU1139 LEU1140 GLY1141 GLN1142 GLY1143 THR1144 SER1145 GLU1146 TRP1147 GLN1148 ASP1149 ASN1150 PHE1151 ASP1152 GLY1153 SER1154 LEU1155 LYS1156 GLU1157 PRO1158 ILE1159 THR1160 LEU1161 PRO1162 ALA1163 ARG1164 VAL1165 PRO1166 ASN1167 ILE1168 LEU1169 LEU1170 ASN1171 GLY1172 THR1173 THR1174 GLY1175 ILE1176 ALA1177 VAL1178 GLY1179 MET1180 ALA1181 THR1182 ASP1183 ILE1184 PRO1185 PRO1186 HIS1187 ASN1188 LEU1189 ARG1190 GLU1191 VAL1192 VAL1193 LYS1194 GLY1195 THR1196 ILE1197 ALA1198 LEU1199 ILE1200 ARG1201 ASN1202 PRO1203 GLN1204 THR1205 SER1206 ASP1207 GLU1208 LYS1209 LEU1210 ALA1211 GLU1212 TYR1213 ILE1214 PRO1215 ALA1216 PRO1217 ASP1218 LEU1219 PRO1220 THR1221 LYS1222 ALA1223 GLU1224 ILE1225 ILE1226 THR1227 PRO1228 PRO1229 GLU1230 GLU1231 LEU1232 LEU1233 LYS1234 ILE1235 GLN1236 THR1237 THR1238 GLY1239 ARG1240 GLY1241 SER1242 TYR1243 ARG1244 MET1245 ARG1246 ALA1247 VAL1248 TYR1249 THR1250 ILE1251 GLU1252 LYS1253 ASN1254 GLU1255 ILE1256 VAL1257 ILE1258 THR1259 GLU1260 LEU1261 PRO1262 TYR1263 GLN1264 VAL1265 SER1266 GLY1267 SER1268 LYS1269 VAL1270 ILE1271 THR1272 GLN1273 ILE1274 ALA1275 ASP1276 GLN1277 MET1278 GLN1279 ALA1280 LYS1281 LYS1282 LEU1283 PRO1284 LEU1285 VAL1286 VAL1287 ASP1288 VAL1289 ARG1290 ASP1291 GLU1292 SER1293 ASP1294 HIS1295 GLU1296 ASN1297 PRO1298 THR1299 ARG1300 LEU1301 VAL1302 ILE1303 VAL1304 LEU1305 ARG1306 SER1307 ASN1308 ARG1309 ILE1310 ASP1311 ALA1312 GLU1313 ALA1314 VAL1315 MET1316 SER1317 HIS1318 LEU1319 PHE1320 ALA1321 THR1322 THR1323 ASP1324 LEU1325 GLU1326 SER1327 SER1328 TYR1329 ARG1330 VAL1331 ASN1332 LEU1333 ASN1334 MET1335 ILE1336 GLY1337 GLU1338 ASP1339 GLY1340 ARG1341 PRO1342 GLN1343 VAL1344 LYS1345 SER1346 ILE1347 ARG1348 ARG1349 ILE1350 LEU1351 LEU1352 GLU1353 TRP1354 ILE1355 GLU1356 ILE1357 ARG1358 LYS1359 LYS1360 THR1361 VAL1362 THR1363 ARG1364 ARG1365 LEU1366 GLN1367 TYR1368 HIS1369 LEU1370 ASN1371 ARG1372 ILE1373 GLU1374 LYS1375 ARG1376 LEU1377 HIS1378 ILE1379 LEU1380 ALA1381 GLY1382 LEU1383 LEU1384 ILE1385 ALA1386 TYR1387 LEU1388 ASP1389 ILE1390 ASP1391 THR1392 VAL1393 ILE1394 ARG1395 ILE1396 ILE1397 ARG1398 GLU1399 GLU1400 ASP1401 GLN1402 PRO1403 LYS1404 PRO1405 VAL1406 LEU1407 MET1408 GLU1409 HIS1410 PHE1411 ASN1412 ILE1413 ASP1414 GLU1415 ILE1416 GLN1417 ALA1418 GLU1419 ALA1420 ILE1421 LEU1422 GLU1423 LEU1424 LYS1425 LEU1426 ARG1427 HIS1428 LEU1429 ALA1430 LYS1431 LEU1432 GLU1433 GLU1434 MET1435 GLU1436 ILE1437 ARG1438 HIS1439 GLU1440 GLN1441 ASP1442 GLU1443 LEU1444 SER1445 ALA1446 LYS1447 ALA1448 ALA1449 ILE1450 ILE1451 ARG1452 GLU1453 GLN1454 LEU1455 GLU1456 ASN1457 PRO1458 GLU1459 SER1460 LEU1461 LYS1462 ASN1463 LEU1464 ILE1465 ILE1466 SER1467 GLU1468 LEU1469 LYS1470 GLU1471 ASP1472 ALA1473 LYS1474 LYS1475 PHE1476 GLY1477 ASP1478 GLU1479 ARG1480 ARG1481 SER1482 PRO1483 ILE1484 VAL1485 ALA1486
Unit 2 GLU364 ARG365 LYS366 LYS367 ILE368 VAL369 SER370 GLY371 PRO372 ALA373 LEU374 PRO375 GLY376 LYS377 LEU378 ALA379 ASP380 CYS381 VAL382 GLY383 GLN384 THR385 ARG386 GLU387 GLU388 SER389 GLU390 LEU391 PHE392 ILE393 VAL394 GLU395 GLY396 ASP397 SER398 ALA399 GLY400 GLY401 SER402 ALA403 LYS404 GLN405 ALA406 ARG407 ASP408 LYS409 ASN410 PHE411 GLN412 ALA413 ILE414 MET415 PRO416 ILE417 ARG418 GLY419 LYS420 ILE421 LEU422 ASN423 THR424 TRP425 GLU426 VAL427 SER428 SER429 ASP430 GLU431 VAL432 LEU433 ALA434 SER435 GLN436 GLU437 VAL438 HIS439 ASP440 ILE441 ALA442 ILE443 ALA444 ILE445 GLY446 VAL447 ASP448 PRO449 GLY450 SER451 ASP452 ASP453 LEU454 SER455 GLU456 LEU457 ARG458 TYR459 GLY460 LYS461 ILE462 CYS463 ILE464 LEU465 ALA466 ASP467 ALA468 ASP469 SER470 ASP471 GLY472 LEU473 HIS474 ILE475 ALA476 THR477 LEU478 LEU479 CYS480 ALA481 LEU482 PHE483 VAL484 LYS485 HIS486 PHE487 PRO488 ALA489 LEU490 VAL491 GLU492 GLU493 GLY494 HIS495 LEU496 TYR497 VAL498 ALA499 MET500 PRO501 PRO502 LEU503 PHE504 ARG505 ILE506 ASP507 ILE508 GLY509 LYS510 ASP511 VAL512 HIS513 TYR514 ALA515 LEU516 ASP517 ASP518 GLU519 GLU520 LEU521 GLU522 THR523 ILE524 LEU525 LYS526 ASN527 VAL528 LYS532 ASN533 PRO534 GLN535 ILE536 THR537 ARG538 PHE539 LYS540 GLY541 LEU542 GLY543 GLU544 MET545 ASN546 ALA547 ILE548 GLN549 LEU550 ARG551 GLU552 THR553 THR554 MET555 ASP556 PRO557 ASN558 THR559 ARG560 ARG561 LEU562 VAL563 GLN564 LEU565 ASP566 LEU567 ASP568 ASP569 ALA570 HIS571 LEU572 THR573 ALA574 GLY575 LEU576 LEU577 ASP578 LYS579 LEU580 LEU581 ALA582 LYS583 LYS584 ARG585 ALA586 ALA587 ASP588 ARG589 LYS590 GLN591 TRP592 LEU593 GLU594 GLN595 LYS596 GLY597 ALA1008 THR1009 GLU1010 ASN1011 ARG1012 SER1013 VAL1014 ALA1015 GLU1016 PHE1017 THR1018 GLU1019 GLN1020 ALA1021 TYR1022 LEU1023 ASN1024 TYR1025 ALA1026 MET1027 TYR1028 VAL1029 ILE1030 MET1031 ASP1032 ARG1033 ALA1034 LEU1035 PRO1036 HIS1037 ILE1038 SER1039 ASP1040 GLY1041 LEU1042 LYS1043 PRO1044 VAL1045 GLN1046 ARG1047 ARG1048 ILE1049 VAL1050 TYR1051 ALA1052 MET1053 SER1054 GLU1055 LEU1056 GLY1057 LEU1058 LYS1059 SER1060 SER1061 GLY1062 LYS1063 PRO1064 LYS1065 LYS1066 SER1067 ALA1068 ARG1069 THR1070 VAL1071 GLY1072 ASP1073 VAL1074 LEU1075 GLY1076 LYS1077 TYR1078 HIS1079 PRO1080 HIS1081 GLY1082 ASP1083 SER1084 ALA1085 CYS1086 TYR1087 GLU1088 ALA1089 MET1090 VAL1091 LEU1092 MET1093 ALA1094 GLN1095 PRO1096 PHE1097 SER1098 TYR1099 ARG1100 TYR1101 PRO1102 LEU1103 ILE1104 GLU1105 GLY1106 GLN1107 GLY1108 ASN1109 TRP1110 GLY1111 SER1112 PRO1113 ASP1114 ASP1115 PRO1116 LYS1117 SER1118 PHE1119 ALA1120 ALA1121 MET1122 ARG1123 PTR1124 THR1125 GLU1126 ALA1127 LYS1128 LEU1129 SER1130 ALA1131 TYR1132 SER1133 GLU1134 LEU1135 LEU1136 LEU1137 SER1138 GLU1139 LEU1140 GLY1141 GLN1142 GLY1143 THR1144 SER1145 GLU1146 TRP1147 GLN1148 ASP1149 ASN1150 PHE1151 ASP1152 GLY1153 SER1154 LEU1155 LYS1156 GLU1157 PRO1158 ILE1159 THR1160 LEU1161 PRO1162 ALA1163 ARG1164 VAL1165 PRO1166 ASN1167 ILE1168 LEU1169 LEU1170 ASN1171 GLY1172 THR1173 THR1174 GLY1175 ILE1176 ALA1177 VAL1178 GLY1179 MET1180 ALA1181 THR1182 ASP1183 ILE1184 PRO1185 PRO1186 HIS1187 ASN1188 LEU1189 ARG1190 GLU1191 VAL1192 VAL1193 LYS1194 GLY1195 THR1196 ILE1197 ALA1198 LEU1199 ILE1200 ARG1201 ASN1202 PRO1203 GLN1204 THR1205 SER1206 ASP1207 GLU1208 LYS1209 LEU1210 ALA1211 GLU1212 TYR1213 ILE1214 PRO1215 ALA1216 PRO1217 ASP1218 LEU1219 PRO1220 THR1221 LYS1222 ALA1223 GLU1224 ILE1225 ILE1226 THR1227 PRO1228 PRO1229 GLU1230 GLU1231 LEU1232 LEU1233 LYS1234 ILE1235 GLN1236 THR1237 THR1238 GLY1239 ARG1240 GLY1241 SER1242 TYR1243 ARG1244 MET1245 ARG1246 ALA1247 VAL1248 TYR1249 THR1250 ILE1251 GLU1252 LYS1253 ASN1254 GLU1255 ILE1256 VAL1257 ILE1258 THR1259 GLU1260 LEU1261 PRO1262 TYR1263 GLN1264 VAL1265 SER1266 GLY1267 SER1268 LYS1269 VAL1270 ILE1271 THR1272 GLN1273 ILE1274 ALA1275 ASP1276 GLN1277 MET1278 GLN1279 ALA1280 LYS1281 LYS1282 LEU1283 PRO1284 LEU1285 VAL1286 VAL1287 ASP1288 VAL1289 ARG1290 ASP1291 GLU1292 SER1293 ASP1294 HIS1295 GLU1296 ASN1297 PRO1298 THR1299 ARG1300 LEU1301 VAL1302 ILE1303 VAL1304 LEU1305 ARG1306 SER1307 ASN1308 ARG1309 ILE1310 ASP1311 ALA1312 GLU1313 ALA1314 VAL1315 MET1316 SER1317 HIS1318 LEU1319 PHE1320 ALA1321 THR1322 THR1323 ASP1324 LEU1325 GLU1326 SER1327 SER1328 TYR1329 ARG1330 VAL1331 ASN1332 LEU1333 ASN1334 MET1335 ILE1336 GLY1337 GLU1338 ASP1339 GLY1340 ARG1341 PRO1342 GLN1343 VAL1344 LYS1345 SER1346 ILE1347 ARG1348 ARG1349 ILE1350 LEU1351 LEU1352 GLU1353 TRP1354 ILE1355 GLU1356 ILE1357 ARG1358 LYS1359 LYS1360 THR1361 VAL1362 THR1363 ARG1364 ARG1365 LEU1366 GLN1367 TYR1368 HIS1369 LEU1370 ASN1371 ARG1372 ILE1373 GLU1374 LYS1375 ARG1376 LEU1377 HIS1378 ILE1379 LEU1380 ALA1381 GLY1382 LEU1383 LEU1384 ILE1385 ALA1386 TYR1387 LEU1388 ASP1389 ILE1390 ASP1391 THR1392 VAL1393 ILE1394 ARG1395 ILE1396 ILE1397 ARG1398 GLU1399 GLU1400 ASP1401 GLN1402 PRO1403 LYS1404 PRO1405 VAL1406 LEU1407 MET1408 GLU1409 HIS1410 PHE1411 ASN1412 ILE1413 ASP1414 GLU1415 ILE1416 GLN1417 ALA1418 GLU1419 ALA1420 ILE1421 LEU1422 GLU1423 LEU1424 LYS1425 LEU1426 ARG1427 HIS1428 LEU1429 ALA1430 LYS1431 LEU1432 GLU1433 GLU1434 MET1435 GLU1436 ILE1437 ARG1438 HIS1439 GLU1440 GLN1441 ASP1442 GLU1443 LEU1444 SER1445 ALA1446 LYS1447 ALA1448 ALA1449 ILE1450 ILE1451 ARG1452 GLU1453 GLN1454 LEU1455 GLU1456 ASN1457 PRO1458 GLU1459 SER1460 LEU1461 LYS1462 ASN1463 LEU1464 ILE1465 ILE1466 SER1467 GLU1468 LEU1469 LYS1470 GLU1471 ASP1472 ALA1473 LYS1474 LYS1475 PHE1476 GLY1477 ASP1478 GLU1479 ARG1480 ARG1481 SER1482 PRO1483 ILE1484 VAL1485 ALA1486 ARG1487
Other macromolecules
Unit 3 DG6 DG7 DT8 DC9 DA10 DT11 DG12 DA13 DA14 DT15 DG16 DA17 DC18 DT19 DA20 DT21 DG22 DC23 DA24 DC25 DG26 DT27 DA28 DA29 DA30 DA31
Unit 4 DT5 DT6 DT7 DA8 DC9 DG10 DT11 DG12 DC13 DA14 DT15 DA16 DG17 DT18 DC19 DA20 DT21 DT22 DC23 DA24 DT25 DG26 DA27 DC28 DC29 DT30
Ligands
Unit 5 MG1504 MG2487
Unit 6 MG1504 MG2488
Unit 7 MFX1100
Unit 8 MFX1100
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany