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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE APOFORM OF THE D-ERYTHROSE-4-PHOSPH DEHYDROGENASE FROM E. COLI
Keywords OXIDOREDUCTASE, HYDRIDE TRANSFER, ALDEHYDE DEHYDROGENASE, PY BIOSYNTHESIS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2X5J     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  O 324 2499 0
2  Protein   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  P 328 2526 0
3  Protein   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  Q 328 2518 0
4  Protein   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  R 330 2543 0
5  Ligand   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  O 1 0 5
6  Ligand   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  P 1 0 5
7  Ligand   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  Q 1 0 5
8  Ligand   D-ERYTHROSE-4-PHOSPHATE DEHYDROGENASE  R 1 0 5
9 Water     539 0 539
total       1853 10086 559
Proteins
Unit 1 THR0 VAL1 ARG2 VAL3 ALA4 ILE5 ASN6 GLY7 PHE8 GLY9 ARG10 ILE11 GLY12 ARG13 ASN14 VAL15 VAL16 ARG17 ALA18 LEU19 TYR20 GLU21 SER22 GLY22A ARG22B ARG22C ALA23 GLU24 ILE25 THR26 VAL27 VAL28 ALA29 ILE30 ASN31 GLU32 LEU33 ALA34 ASP36 ALA37 ALA38 GLY39 MET40 ALA41 HIS42 LEU43 LEU44 LYS45 TYR46 ASP47 THR48 SER49 HIS50 GLY51 ARG52 PHE53 ALA54 TRP55 GLU56 VAL57 ARG58 GLN59 GLU60 ARG61 ASP62 GLN63 LEU64 PHE65 VAL66 GLY67 ASP68 ASP69 ALA70 ILE71 ARG72 VAL73 LEU74 HIS75 GLU76 ARG77 SER78 LEU79 GLN80 SER81 LEU82 PRO83 TRP84 ARG85 GLU86 LEU87 GLY88 VAL89 ASP90 VAL91 VAL92 LEU93 ASP94 CYS95 THR96 GLY97 VAL98 TYR99 GLY100 SER101 ARG102 GLU103 HIS104 GLY105 GLU106 ALA107 HIS108 ILE109 ALA110 ALA111 GLY112 ALA113 LYS114 LYS115 VAL116 LEU117 PHE118 SER119 HIS120 PRO121 GLY122 SER122A ASN123 ASP124 LEU124A ASP125 ALA126 THR127 VAL128 VAL129 TYR130 GLY131 VAL132 ASN133 GLN134 ASP135 GLN136 LEU137 ARG138 ALA139 GLU140 HIS141 ARG142 ILE143 VAL144 SER145 ASN146 ALA147 SER148 CYS149 THR150 THR151 ASN152 CYS153 ILE154 ILE155 PRO156 VAL157 ILE158 LYS159 LEU160 LEU161 ASP162 ASP163 ALA164 TYR165 GLY166 ILE167 GLU168 SER169 GLY170 THR171 VAL172 THR173 THR174 ILE175 HIS176 SER177 ALA178 MET179 ASP192 LEU193 ARG194 ARG195 THR196 ARG197 ALA198 ALA199 SER200 GLN201 SER202 ILE203 ILE204 PRO205 VAL206 ASP207 THR208 LYS209 LEU210 ALA211 ALA212 GLY213 ILE214 THR215 ARG216 PHE217 PHE218 PRO219 GLN220 PHE221 ASN222 ASP223 ARG224 PHE225 GLU226 ALA227 ILE228 ALA229 VAL230 ARG231 VAL232 PRO233 THR234 ILE235 ASN236 VAL237 THR238 ALA239 ILE240 ASP241 LEU242 SER243 VAL244 THR245 VAL246 LYS247 LYS248 PRO249 VAL250 LYS251 ALA252 ASN253 GLU254 VAL255 ASN256 LEU257 LEU258 LEU259 GLN260 LYS261 ALA262 ALA263 GLN264 GLY265 ALA266 PHE267 HIS268 GLY269 ILE270 VAL271 ASP272 TYR273 THR274 GLU275 LEU276 PRO277 LEU278 VAL279 SER280 VAL281 ASP282 PHE283 ASN284 HIS285 ASP286 PRO287 HIS288 SER289 ALA290 ILE291 VAL292 ASP293 GLY294 THR295 GLN296 THR297 ARG298 VAL299 SER300 GLY301 ALA302 HIS303 LEU304 ILE305 LYS306 THR307 LEU308 VAL309 TRP310 CYS311 ASP312 ASN313 GLU314 TRP315 GLY316 PHE317 ALA318 ASN319 ARG320 MET321 LEU322 ASP323 THR324 THR325 LEU326 ALA327 MET328 ALA329 THR330 VAL331
Unit 2 THR0 VAL1 ARG2 VAL3 ALA4 ILE5 ASN6 GLY7 PHE8 GLY9 ARG10 ILE11 GLY12 ARG13 ASN14 VAL15 VAL16 ARG17 ALA18 LEU19 TYR20 GLU21 SER22 GLY22A ARG22B ARG22C ALA23 GLU24 ILE25 THR26 VAL27 VAL28 ALA29 ILE30 ASN31 GLU32 LEU33 ALA34 ASP36 ALA37 ALA38 GLY39 MET40 ALA41 HIS42 LEU43 LEU44 LYS45 TYR46 ASP47 THR48 SER49 HIS50 GLY51 ARG52 PHE53 ALA54 TRP55 GLU56 VAL57 ARG58 GLN59 GLU60 ARG61 ASP62 GLN63 LEU64 PHE65 VAL66 GLY67 ASP68 ASP69 ALA70 ILE71 ARG72 VAL73 LEU74 HIS75 GLU76 ARG77 SER78 LEU79 GLN80 SER81 LEU82 PRO83 TRP84 ARG85 GLU86 LEU87 GLY88 VAL89 ASP90 VAL91 VAL92 LEU93 ASP94 CYS95 THR96 GLY97 VAL98 TYR99 GLY100 SER101 ARG102 GLU103 HIS104 GLY105 GLU106 ALA107 HIS108 ILE109 ALA110 ALA111 GLY112 ALA113 LYS114 LYS115 VAL116 LEU117 PHE118 SER119 HIS120 PRO121 GLY122 SER122A ASN123 ASP124 LEU124A ASP125 ALA126 THR127 VAL128 VAL129 TYR130 GLY131 VAL132 ASN133 GLN134 ASP135 GLN136 LEU137 ARG138 ALA139 GLU140 HIS141 ARG142 ILE143 VAL144 SER145 ASN146 ALA147 SER148 CYS149 THR150 THR151 ASN152 CYS153 ILE154 ILE155 PRO156 VAL157 ILE158 LYS159 LEU160 LEU161 ASP162 ASP163 ALA164 TYR165 GLY166 ILE167 GLU168 SER169 GLY170 THR171 VAL172 THR173 THR174 ILE175 HIS176 SER177 ALA178 MET179 HIS180 HIS190 PRO191 ASP192 LEU193 ARG194 ARG195 THR196 ARG197 ALA198 ALA199 SER200 GLN201 SER202 ILE203 ILE204 PRO205 VAL206 ASP207 THR208 LYS209 LEU210 ALA211 ALA212 GLY213 ILE214 THR215 ARG216 PHE217 PHE218 PRO219 GLN220 PHE221 ASN222 ASP223 ARG224 PHE225 GLU226 ALA227 ILE228 ALA229 VAL230 ARG231 VAL232 PRO233 THR234 ILE235 ASN236 VAL237 THR238 ALA239 ILE240 ASP241 LEU242 SER243 VAL244 THR245 VAL246 LYS247 LYS248 PRO249 VAL250 LYS251 ALA252 ASN253 GLU254 VAL255 ASN256 LEU257 LEU258 LEU259 GLN260 LYS261 ALA262 ALA263 GLN264 GLY265 ALA266 PHE267 HIS268 GLY269 ILE270 VAL271 ASP272 TYR273 THR274 GLU275 LEU276 PRO277 LEU278 VAL279 SER280 VAL281 ASP282 PHE283 ASN284 HIS285 ASP286 PRO287 HIS288 SER289 ALA290 ILE291 VAL292 ASP293 GLY294 THR295 GLN296 THR297 ARG298 VAL299 SER300 GLY301 ALA302 HIS303 LEU304 ILE305 LYS306 THR307 LEU308 VAL309 TRP310 CYS311 ASP312 ASN313 GLU314 TRP315 GLY316 PHE317 ALA318 ASN319 ARG320 MET321 LEU322 ASP323 THR324 THR325 LEU326 ALA327 MET328 ALA329 THR330 VAL331 ALA332
Unit 3 THR0 VAL1 ARG2 VAL3 ALA4 ILE5 ASN6 GLY7 PHE8 GLY9 ARG10 ILE11 GLY12 ARG13 ASN14 VAL15 VAL16 ARG17 ALA18 LEU19 TYR20 GLU21 SER22 GLY22A ARG22B ARG22C ALA23 GLU24 ILE25 THR26 VAL27 VAL28 ALA29 ILE30 ASN31 GLU32 LEU33 ALA34 ASP36 ALA37 ALA38 GLY39 MET40 ALA41 HIS42 LEU43 LEU44 LYS45 TYR46 ASP47 THR48 SER49 HIS50 GLY51 ARG52 PHE53 ALA54 TRP55 GLU56 VAL57 ARG58 GLN59 GLU60 ARG61 ASP62 GLN63 LEU64 PHE65 VAL66 GLY67 ASP68 ASP69 ALA70 ILE71 ARG72 VAL73 LEU74 HIS75 GLU76 ARG77 SER78 LEU79 GLN80 SER81 LEU82 PRO83 TRP84 ARG85 GLU86 LEU87 GLY88 VAL89 ASP90 VAL91 VAL92 LEU93 ASP94 CYS95 THR96 GLY97 VAL98 TYR99 GLY100 SER101 ARG102 GLU103 HIS104 GLY105 GLU106 ALA107 HIS108 ILE109 ALA110 ALA111 GLY112 ALA113 LYS114 LYS115 VAL116 LEU117 PHE118 SER119 HIS120 PRO121 GLY122 SER122A ASN123 ASP124 LEU124A ASP125 ALA126 THR127 VAL128 VAL129 TYR130 GLY131 VAL132 ASN133 GLN134 ASP135 GLN136 LEU137 ARG138 ALA139 GLU140 HIS141 ARG142 ILE143 VAL144 SER145 ASN146 ALA147 SER148 CYS149 THR150 THR151 ASN152 CYS153 ILE154 ILE155 PRO156 VAL157 ILE158 LYS159 LEU160 LEU161 ASP162 ASP163 ALA164 TYR165 GLY166 ILE167 GLU168 SER169 GLY170 THR171 VAL172 THR173 THR174 ILE175 HIS176 SER177 ALA178 MET179 HIS190 PRO191 ASP192 LEU193 ARG194 ARG195 THR196 ARG197 ALA198 ALA199 SER200 GLN201 SER202 ILE203 ILE204 PRO205 VAL206 ASP207 THR208 LYS209 LEU210 ALA211 ALA212 GLY213 ILE214 THR215 ARG216 PHE217 PHE218 PRO219 GLN220 PHE221 ASN222 ASP223 ARG224 PHE225 GLU226 ALA227 ILE228 ALA229 VAL230 ARG231 VAL232 PRO233 THR234 ILE235 ASN236 VAL237 THR238 ALA239 ILE240 ASP241 LEU242 SER243 VAL244 THR245 VAL246 LYS247 LYS248 PRO249 VAL250 LYS251 ALA252 ASN253 GLU254 VAL255 ASN256 LEU257 LEU258 LEU259 GLN260 LYS261 ALA262 ALA263 GLN264 GLY265 ALA266 PHE267 HIS268 GLY269 ILE270 VAL271 ASP272 TYR273 THR274 GLU275 LEU276 PRO277 LEU278 VAL279 SER280 VAL281 ASP282 PHE283 ASN284 HIS285 ASP286 PRO287 HIS288 SER289 ALA290 ILE291 VAL292 ASP293 GLY294 THR295 GLN296 THR297 ARG298 VAL299 SER300 GLY301 ALA302 HIS303 LEU304 ILE305 LYS306 THR307 LEU308 VAL309 TRP310 CYS311 ASP312 ASN313 GLU314 TRP315 GLY316 PHE317 ALA318 ASN319 ARG320 MET321 LEU322 ASP323 THR324 THR325 LEU326 ALA327 MET328 ALA329 THR330 VAL331 ALA332 PHE333
Unit 4 THR0 VAL1 ARG2 VAL3 ALA4 ILE5 ASN6 GLY7 PHE8 GLY9 ARG10 ILE11 GLY12 ARG13 ASN14 VAL15 VAL16 ARG17 ALA18 LEU19 TYR20 GLU21 SER22 GLY22A ARG22B ARG22C ALA23 GLU24 ILE25 THR26 VAL27 VAL28 ALA29 ILE30 ASN31 GLU32 LEU33 ALA34 ASP36 ALA37 ALA38 GLY39 MET40 ALA41 HIS42 LEU43 LEU44 LYS45 TYR46 ASP47 THR48 SER49 HIS50 GLY51 ARG52 PHE53 ALA54 TRP55 GLU56 VAL57 ARG58 GLN59 GLU60 ARG61 ASP62 GLN63 LEU64 PHE65 VAL66 GLY67 ASP68 ASP69 ALA70 ILE71 ARG72 VAL73 LEU74 HIS75 GLU76 ARG77 SER78 LEU79 GLN80 SER81 LEU82 PRO83 TRP84 ARG85 GLU86 LEU87 GLY88 VAL89 ASP90 VAL91 VAL92 LEU93 ASP94 CYS95 THR96 GLY97 VAL98 TYR99 GLY100 SER101 ARG102 GLU103 HIS104 GLY105 GLU106 ALA107 HIS108 ILE109 ALA110 ALA111 GLY112 ALA113 LYS114 LYS115 VAL116 LEU117 PHE118 SER119 HIS120 PRO121 GLY122 SER122A ASN123 ASP124 LEU124A ASP125 ALA126 THR127 VAL128 VAL129 TYR130 GLY131 VAL132 ASN133 GLN134 ASP135 GLN136 LEU137 ARG138 ALA139 GLU140 HIS141 ARG142 ILE143 VAL144 SER145 ASN146 ALA147 SER148 CYS149 THR150 THR151 ASN152 CYS153 ILE154 ILE155 PRO156 VAL157 ILE158 LYS159 LEU160 LEU161 ASP162 ASP163 ALA164 TYR165 GLY166 ILE167 GLU168 SER169 GLY170 THR171 VAL172 THR173 THR174 ILE175 HIS176 SER177 ALA178 MET179 ALA188 TYR189 HIS190 PRO191 ASP192 LEU193 ARG194 ARG195 THR196 ARG197 ALA198 ALA199 SER200 GLN201 SER202 ILE203 ILE204 PRO205 VAL206 ASP207 THR208 LYS209 LEU210 ALA211 ALA212 GLY213 ILE214 THR215 ARG216 PHE217 PHE218 PRO219 GLN220 PHE221 ASN222 ASP223 ARG224 PHE225 GLU226 ALA227 ILE228 ALA229 VAL230 ARG231 VAL232 PRO233 THR234 ILE235 ASN236 VAL237 THR238 ALA239 ILE240 ASP241 LEU242 SER243 VAL244 THR245 VAL246 LYS247 LYS248 PRO249 VAL250 LYS251 ALA252 ASN253 GLU254 VAL255 ASN256 LEU257 LEU258 LEU259 GLN260 LYS261 ALA262 ALA263 GLN264 GLY265 ALA266 PHE267 HIS268 GLY269 ILE270 VAL271 ASP272 TYR273 THR274 GLU275 LEU276 PRO277 LEU278 VAL279 SER280 VAL281 ASP282 PHE283 ASN284 HIS285 ASP286 PRO287 HIS288 SER289 ALA290 ILE291 VAL292 ASP293 GLY294 THR295 GLN296 THR297 ARG298 VAL299 SER300 GLY301 ALA302 HIS303 LEU304 ILE305 LYS306 THR307 LEU308 VAL309 TRP310 CYS311 ASP312 ASN313 GLU314 TRP315 GLY316 PHE317 ALA318 ASN319 ARG320 MET321 LEU322 ASP323 THR324 THR325 LEU326 ALA327 MET328 ALA329 THR330 VAL331 ALA332 PHE333
Ligands
Unit 5 PO41600
Unit 6 PO41600
Unit 7 PO41600
Unit 8 PO41600
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany