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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE STREPTOCOCCUS PYOGENES FAMILY GH38 ALPHA- MANNOSIDASE
Keywords HYDROLASE, GLYCOSIDASE, GLYCOSIDE HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2WYH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALPHA-MANNOSIDASE  A 905 7221 0
2  Protein   ALPHA-MANNOSIDASE  B 891 7122 0
3  Ligand   ALPHA-MANNOSIDASE  A 8 0 43
4  Ligand   ALPHA-MANNOSIDASE  B 7 0 39
5 Water     915 0 915
total       2726 14343 997
Proteins
Unit 1 GLY-9 LEU-8 GLU-7 VAL-6 LEU-5 PHE-4 GLN-3 GLY-2 PRO-1 ALA0 MET1 ALA2 THR3 LYS4 LYS5 VAL6 HIS7 ILE8 ILE9 SER10 HIS11 SER12 HIS13 TRP14 ASP15 ARG16 GLU17 TRP18 TYR19 MET20 ALA21 TYR22 GLU23 GLN24 HIS25 HIS26 MET27 ARG28 LEU29 ILE30 ASN31 LEU32 ILE33 ASP34 ASP35 LEU36 LEU37 GLU38 VAL39 PHE40 GLN41 THR42 ASP43 PRO44 ASP45 PHE46 HIS47 SER48 PHE49 HIS50 LEU51 ASP52 GLY53 GLN54 THR55 ILE56 ILE57 LEU58 ASP59 ASP60 TYR61 LEU62 LYS63 VAL64 ARG65 PRO66 GLU67 ARG68 GLU69 PRO70 GLU71 ILE72 ARG73 GLN74 ALA75 ILE76 ALA77 SER78 GLY79 LYS80 LEU81 ARG82 ILE83 GLY84 PRO85 PHE86 TYR87 ILE88 LEU89 GLN90 ASP91 ASP92 PHE93 LEU94 THR95 SER96 SER97 GLU98 SER99 ASN100 VAL101 ARG102 ASN103 MET104 LEU105 ILE106 GLY107 LYS108 GLU109 ASP110 CYS111 ASP112 ARG113 TRP114 GLY115 ALA116 SER117 VAL118 PRO119 LEU120 GLY121 TYR122 PHE123 PRO124 ASP125 THR126 PHE127 GLY128 ASN129 MET130 GLY131 GLN132 THR133 PRO134 GLN135 LEU136 MET137 LEU138 LYS139 ALA140 GLY141 LEU142 GLN143 ALA144 ALA145 ALA146 PHE147 GLY148 ARG149 GLY150 ILE151 ARG152 PRO153 THR154 GLY155 PHE156 ASN157 ASN158 GLN159 VAL160 ASP161 THR162 SER163 GLU164 LYS165 TYR166 SER167 SER168 GLN169 PHE170 SER171 GLU172 ILE173 SER174 TRP175 GLN176 GLY177 PRO178 ASP179 ASN180 SER181 ARG182 ILE183 LEU184 GLY185 LEU186 LEU187 PHE188 ALA189 ASN190 TRP191 TYR192 SER193 ASN194 GLY195 ASN196 GLU197 ILE198 PRO199 THR200 THR201 GLU202 ALA203 GLU204 ALA205 ARG206 LEU207 PHE208 TRP209 ASP210 LYS211 LYS212 LEU213 ALA214 ASP215 ALA216 GLU217 ARG218 PHE219 ALA220 SER221 THR222 LYS223 HIS224 LEU225 LEU226 MET227 MET228 ASN229 GLY230 CYS231 ASP232 HIS233 GLN234 PRO235 VAL236 GLN237 LEU238 ASP239 VAL240 THR241 LYS242 ALA243 ILE244 ALA245 LEU246 ALA247 ASN248 GLN249 LEU250 TYR251 PRO252 ASP253 TYR254 GLU255 PHE256 VAL257 HIS258 SER259 CYS260 PHE261 GLU262 ASP263 TYR264 LEU265 ALA266 ASP267 LEU268 ALA269 ASP270 ASP271 LEU272 PRO273 GLU274 ASN275 LEU276 SER277 THR278 VAL279 GLN280 GLY281 GLU282 ILE283 THR284 SER285 GLN286 GLU287 THR288 ASP289 GLY290 TRP291 TYR292 THR293 LEU294 ALA295 ASN296 THR297 ALA298 SER299 ALA300 ARG301 ILE302 TYR303 LEU304 LYS305 GLN306 ALA307 ASN308 THR309 ARG310 VAL311 SER312 ARG313 GLN314 LEU315 GLU316 ASN317 ILE318 THR319 GLU320 PRO321 LEU322 ALA323 ALA324 MET325 ALA326 TYR327 GLU328 VAL329 THR330 SER331 THR332 TYR333 PRO334 HIS335 ASP336 GLN337 LEU338 ARG339 TYR340 ALA341 TRP342 LYS343 THR344 LEU345 MET346 GLN347 ASN348 HIS349 PRO350 HIS351 ASP352 SER353 ILE354 CYS355 GLY356 CYS357 SER358 VAL359 ASP360 SER361 VAL362 HIS363 ARG364 GLU365 MET366 MET367 THR368 ARG369 PHE370 GLU371 LYS372 ALA373 TYR374 GLU375 VAL376 GLY377 HIS378 TYR379 LEU380 ALA381 LYS382 GLU383 ALA384 ALA385 LYS386 GLN387 ILE388 ALA389 ASP390 ALA391 ILE392 ASP393 THR394 ARG395 ASP396 PHE397 PRO398 MET399 ASP400 SER401 GLN402 PRO403 PHE404 VAL405 LEU406 PHE407 ASN408 THR409 SER410 GLY411 HIS412 SER413 LYS414 THR415 SER416 VAL417 ALA418 GLU419 LEU420 SER421 LEU422 THR423 TRP424 LYS425 LYS426 TYR427 HIS428 PHE429 GLY430 GLN431 ARG432 PHE433 PRO434 LYS435 GLU436 VAL437 TYR438 GLN439 GLU440 ALA441 GLN442 GLU443 TYR444 LEU445 ALA446 ARG447 LEU448 SER449 GLN450 SER451 PHE452 GLN453 ILE454 ILE455 ASP456 THR457 SER458 GLY459 GLN460 VAL461 ARG462 PRO463 GLU464 ALA465 GLU466 ILE467 LEU468 GLY469 THR470 SER471 ILE472 ALA473 PHE474 ASP475 TYR476 ASP477 LEU478 PRO479 LYS480 ARG481 SER482 PHE483 ARG484 GLU485 PRO486 TYR487 PHE488 ALA489 ILE490 LYS491 VAL492 ARG493 LEU494 ARG495 LEU496 PRO497 ILE498 THR499 LEU500 PRO501 ALA502 MET503 SER504 TRP505 LYS506 THR507 LEU508 ALA509 LEU510 LYS511 LEU512 GLY513 ASN514 THR521 VAL522 SER523 LEU524 TYR525 ASP526 ASP527 SER528 ASN529 GLN530 CYS531 LEU532 GLU533 ASN534 GLY535 PHE536 LEU537 LYS538 VAL539 MET540 ILE541 GLN542 THR543 ASP544 GLY545 ARG546 LEU547 THR548 ILE549 THR550 ASP551 LYS552 GLN553 SER554 GLY555 LEU556 ILE557 TYR558 GLN559 ASP560 LEU561 LEU562 ARG563 PHE564 GLU565 ASP566 CYS567 GLY568 ASP569 ILE570 GLY571 ASN572 GLU573 TYR574 ILE575 SER576 ARG577 GLN578 PRO579 ASN580 HIS581 ASP582 GLN583 PRO584 PHE585 TYR586 ALA587 ASP588 GLN589 GLY590 THR591 ILE592 LYS593 LEU594 ASN595 ILE596 ILE597 SER598 ASN599 THR600 ALA601 GLN602 VAL603 ALA604 GLU605 LEU606 GLU607 ILE608 GLN609 GLN610 THR611 PHE612 ALA613 ILE614 PRO615 ILE616 SER617 ALA618 ASP619 LYS620 LEU621 LEU622 GLN623 ALA624 GLU625 MET626 GLU627 ALA628 VAL629 ILE630 ASP631 ILE632 THR633 GLU634 ARG635 GLN636 ALA637 ARG638 ARG639 SER640 GLN641 GLU642 LYS643 ALA644 GLU645 LEU646 THR647 LEU648 THR649 THR650 LEU651 ILE652 ARG653 MET654 GLU655 LYS656 ASN657 ASN658 PRO659 ARG660 LEU661 GLN662 PHE663 THR664 THR665 ARG666 PHE667 ASP668 ASN669 GLN670 MET671 THR672 ASN673 HIS674 ARG675 LEU676 ARG677 VAL678 LEU679 PHE680 PRO681 THR682 HIS683 LEU684 LYS685 THR686 ASP687 HIS688 HIS689 LEU690 ALA691 ASP692 SER693 ILE694 PHE695 GLU696 THR697 VAL698 LYS699 ARG700 PRO701 ASN702 HIS703 PRO704 ASP705 ALA706 THR707 PHE708 TRP709 LYS710 ASN711 PRO712 SER713 ASN714 PRO715 GLN716 HIS717 GLN718 GLU719 CYS720 PHE721 VAL722 SER723 LEU724 PHE725 ASP726 GLY727 GLU728 ASN729 GLY730 VAL731 THR732 ILE733 GLY734 ASN735 TYR736 GLY737 LEU738 ASN739 GLU740 TYR741 GLU742 ILE743 LEU744 PRO745 ASP746 THR747 ASN748 THR749 ILE750 ALA751 ILE752 THR753 LEU754 LEU755 ARG756 SER757 VAL758 GLY759 GLU760 MET761 GLY762 ASP763 TRP764 GLY765 TYR766 PHE767 PRO768 THR769 PRO770 GLU771 ALA772 GLN773 CYS774 LEU775 GLY776 LYS777 HIS778 SER779 LEU780 SER781 TYR782 SER783 PHE784 GLU785 SER786 ILE787 THR788 LYS789 GLN790 THR791 GLN792 PHE793 ALA794 SER795 TYR796 TRP797 ARG798 ALA799 GLN800 GLU801 GLY802 GLN803 VAL804 PRO805 VAL806 ILE807 THR808 THR809 GLN810 THR811 ASN812 GLN813 HIS814 GLU815 GLY816 THR817 LEU818 ALA819 ALA820 GLU821 TYR822 SER823 TYR824 LEU825 THR826 GLY827 THR828 ASN829 ASP830 GLN831 VAL832 ALA833 LEU834 THR835 ALA836 PHE837 LYS838 ARG839 ARG840 LEU841 ALA842 ASP843 ASN844 ALA845 LEU846 ILE847 THR848 ARG849 SER850 TYR851 ASN852 LEU853 SER854 ASN855 ASP856 LYS857 THR858 CYS859 ASP860 PHE861 SER862 LEU863 SER864 LEU865 PRO866 ASN867 TYR868 ASN869 ALA870 LYS871 VAL872 THR873 ASN874 LEU875 LEU876 GLU877 LYS878 ASP879 SER880 LYS881 GLN882 SER883 THR884 PRO885 SER886 GLN887 LEU888 GLY889 LYS890 ALA891 GLU892 ILE893 LEU894 THR895 LEU896 ALA897 TRP898 LYS899 LYS900 GLN901
Unit 2 THR3 LYS4 LYS5 VAL6 HIS7 ILE8 ILE9 SER10 HIS11 SER12 HIS13 TRP14 ASP15 ARG16 GLU17 TRP18 TYR19 MET20 ALA21 TYR22 GLU23 GLN24 HIS25 HIS26 MET27 ARG28 LEU29 ILE30 ASN31 LEU32 ILE33 ASP34 ASP35 LEU36 LEU37 GLU38 VAL39 PHE40 GLN41 THR42 ASP43 PRO44 ASP45 PHE46 HIS47 SER48 PHE49 HIS50 LEU51 ASP52 GLY53 GLN54 THR55 ILE56 ILE57 LEU58 ASP59 ASP60 TYR61 LEU62 LYS63 VAL64 ARG65 PRO66 GLU67 ARG68 GLU69 PRO70 GLU71 ILE72 ARG73 GLN74 ALA75 ILE76 ALA77 SER78 GLY79 LYS80 LEU81 ARG82 ILE83 GLY84 PRO85 PHE86 TYR87 ILE88 LEU89 GLN90 ASP91 ASP92 PHE93 LEU94 THR95 SER96 SER97 GLU98 SER99 ASN100 VAL101 ARG102 ASN103 MET104 LEU105 ILE106 GLY107 LYS108 GLU109 ASP110 CYS111 ASP112 ARG113 TRP114 GLY115 ALA116 SER117 VAL118 PRO119 LEU120 GLY121 TYR122 PHE123 PRO124 ASP125 THR126 PHE127 GLY128 ASN129 MET130 GLY131 GLN132 THR133 PRO134 GLN135 LEU136 MET137 LEU138 LYS139 ALA140 GLY141 LEU142 GLN143 ALA144 ALA145 ALA146 PHE147 GLY148 ARG149 GLY150 ILE151 ARG152 PRO153 THR154 GLY155 PHE156 ASN157 ASN158 GLN159 VAL160 ASP161 THR162 SER163 GLU164 LYS165 TYR166 SER167 SER168 GLN169 PHE170 SER171 GLU172 ILE173 SER174 TRP175 GLN176 GLY177 PRO178 ASP179 ASN180 SER181 ARG182 ILE183 LEU184 GLY185 LEU186 LEU187 PHE188 ALA189 ASN190 TRP191 TYR192 SER193 ASN194 GLY195 ASN196 GLU197 ILE198 PRO199 THR200 THR201 GLU202 ALA203 GLU204 ALA205 ARG206 LEU207 PHE208 TRP209 ASP210 LYS211 LYS212 LEU213 ALA214 ASP215 ALA216 GLU217 ARG218 PHE219 ALA220 SER221 THR222 LYS223 HIS224 LEU225 LEU226 MET227 MET228 ASN229 GLY230 CYS231 ASP232 HIS233 GLN234 PRO235 VAL236 GLN237 LEU238 ASP239 VAL240 THR241 LYS242 ALA243 ILE244 ALA245 LEU246 ALA247 ASN248 GLN249 LEU250 TYR251 PRO252 ASP253 TYR254 GLU255 PHE256 VAL257 HIS258 SER259 CYS260 PHE261 GLU262 ASP263 TYR264 LEU265 ALA266 ASP267 LEU268 ALA269 ASP270 ASP271 LEU272 PRO273 GLU274 ASN275 LEU276 SER277 THR278 VAL279 GLN280 GLY281 GLU282 ILE283 THR284 SER285 GLN286 GLU287 THR288 ASP289 GLY290 TRP291 TYR292 THR293 LEU294 ALA295 ASN296 THR297 ALA298 SER299 ALA300 ARG301 ILE302 TYR303 LEU304 LYS305 GLN306 ALA307 ASN308 THR309 ARG310 VAL311 SER312 ARG313 GLN314 LEU315 GLU316 ASN317 ILE318 THR319 GLU320 PRO321 LEU322 ALA323 ALA324 MET325 ALA326 TYR327 GLU328 VAL329 THR330 SER331 THR332 TYR333 PRO334 HIS335 ASP336 GLN337 LEU338 ARG339 TYR340 ALA341 TRP342 LYS343 THR344 LEU345 MET346 GLN347 ASN348 HIS349 PRO350 HIS351 ASP352 SER353 ILE354 CYS355 GLY356 CYS357 SER358 VAL359 ASP360 SER361 VAL362 HIS363 ARG364 GLU365 MET366 MET367 THR368 ARG369 PHE370 GLU371 LYS372 ALA373 TYR374 GLU375 VAL376 GLY377 HIS378 TYR379 LEU380 ALA381 LYS382 GLU383 ALA384 ALA385 LYS386 GLN387 ILE388 ALA389 ASP390 ALA391 ILE392 ASP393 THR394 ARG395 ASP396 PHE397 PRO398 MET399 ASP400 SER401 GLN402 PRO403 PHE404 VAL405 LEU406 PHE407 ASN408 THR409 SER410 GLY411 HIS412 SER413 LYS414 THR415 SER416 VAL417 ALA418 GLU419 LEU420 SER421 LEU422 THR423 TRP424 LYS425 LYS426 TYR427 HIS428 PHE429 GLY430 GLN431 ARG432 PHE433 PRO434 LYS435 GLU436 VAL437 TYR438 GLN439 GLU440 ALA441 GLN442 GLU443 TYR444 LEU445 ALA446 ARG447 LEU448 SER449 GLN450 SER451 PHE452 GLN453 ILE454 ILE455 ASP456 THR457 SER458 GLY459 GLN460 VAL461 ARG462 PRO463 GLU464 ALA465 GLU466 ILE467 LEU468 GLY469 THR470 SER471 ILE472 ALA473 PHE474 ASP475 TYR476 ASP477 LEU478 PRO479 LYS480 ARG481 SER482 PHE483 ARG484 GLU485 PRO486 TYR487 PHE488 ALA489 ILE490 LYS491 VAL492 ARG493 LEU494 ARG495 LEU496 PRO497 ILE498 THR499 LEU500 PRO501 ALA502 MET503 SER504 TRP505 LYS506 THR507 LEU508 ALA509 LEU510 LYS511 LEU512 GLY513 VAL522 SER523 LEU524 TYR525 ASP526 ASP527 SER528 ASN529 GLN530 CYS531 LEU532 GLU533 ASN534 GLY535 PHE536 LEU537 LYS538 VAL539 MET540 ILE541 GLN542 THR543 ASP544 GLY545 ARG546 LEU547 THR548 ILE549 THR550 ASP551 LYS552 GLN553 SER554 GLY555 LEU556 ILE557 TYR558 GLN559 ASP560 LEU561 LEU562 ARG563 PHE564 GLU565 ASP566 CYS567 GLY568 ASP569 ILE570 GLY571 ASN572 GLU573 TYR574 ILE575 SER576 ARG577 GLN578 PRO579 ASN580 HIS581 ASP582 GLN583 PRO584 PHE585 TYR586 ALA587 ASP588 GLN589 GLY590 THR591 ILE592 LYS593 LEU594 ASN595 ILE596 ILE597 SER598 ASN599 THR600 ALA601 GLN602 VAL603 ALA604 GLU605 LEU606 GLU607 ILE608 GLN609 GLN610 THR611 PHE612 ALA613 ILE614 PRO615 ILE616 SER617 ALA618 ASP619 LYS620 LEU621 LEU622 GLN623 ALA624 GLU625 MET626 GLU627 ALA628 VAL629 ILE630 ASP631 ILE632 THR633 GLU634 ARG635 GLN636 ALA637 ARG638 ARG639 SER640 GLN641 GLU642 LYS643 ALA644 GLU645 LEU646 THR647 LEU648 THR649 THR650 LEU651 ILE652 ARG653 MET654 GLU655 LYS656 ASN657 ASN658 PRO659 ARG660 LEU661 GLN662 PHE663 THR664 THR665 ARG666 PHE667 ASP668 ASN669 GLN670 MET671 THR672 ASN673 HIS674 ARG675 LEU676 ARG677 VAL678 LEU679 PHE680 PRO681 THR682 HIS683 LEU684 LYS685 THR686 ASP687 HIS688 HIS689 LEU690 ALA691 ASP692 SER693 ILE694 PHE695 GLU696 THR697 VAL698 LYS699 ARG700 PRO701 ASN702 HIS703 PRO704 ASP705 ALA706 THR707 PHE708 TRP709 LYS710 ASN711 PRO712 SER713 ASN714 PRO715 GLN716 HIS717 GLN718 GLU719 CYS720 PHE721 VAL722 SER723 LEU724 PHE725 ASP726 GLY727 GLU728 ASN729 GLY730 VAL731 THR732 ILE733 GLY734 ASN735 TYR736 GLY737 LEU738 ASN739 GLU740 TYR741 GLU742 ILE743 LEU744 PRO745 ASP746 THR747 ASN748 THR749 ILE750 ALA751 ILE752 THR753 LEU754 LEU755 ARG756 SER757 VAL758 GLY759 GLU760 MET761 GLY762 ASP763 TRP764 GLY765 TYR766 PHE767 PRO768 THR769 PRO770 GLU771 ALA772 GLN773 CYS774 LEU775 GLY776 LYS777 HIS778 SER779 LEU780 SER781 TYR782 SER783 PHE784 GLU785 SER786 ILE787 THR788 LYS789 GLN790 THR791 GLN792 PHE793 ALA794 SER795 TYR796 TRP797 ARG798 ALA799 GLN800 GLU801 GLY802 GLN803 VAL804 PRO805 VAL806 ILE807 THR808 THR809 GLN810 THR811 ASN812 GLN813 HIS814 GLU815 GLY816 THR817 LEU818 ALA819 ALA820 GLU821 TYR822 SER823 TYR824 LEU825 THR826 GLY827 THR828 ASN829 ASP830 GLN831 VAL832 ALA833 LEU834 THR835 ALA836 PHE837 LYS838 ARG839 ARG840 LEU841 ALA842 ASP843 ASN844 ALA845 LEU846 ILE847 THR848 ARG849 SER850 TYR851 ASN852 LEU853 SER854 ASN855 ASP856 LYS857 THR858 CYS859 ASP860 PHE861 SER862 LEU863 SER864 LEU865 PRO866 ASN867 TYR868 ASN869 ALA870 LYS871 VAL872 THR873 ASN874 LEU875 LEU876 GLU877 LYS878 ASP879 SER880 LYS881 GLN882 SER883 THR884 PRO885 SER886 GLN887 LEU888 GLY889 LYS890 ALA891 GLU892 ILE893 LEU894 THR895 LEU896 ALA897 TRP898 LYS899 LYS900 GLN901
Ligands
Unit 3 ZN902 GOL903 GOL904 GOL905 GOL906 GOL907 GOL908 GOL909
Unit 4 ZN902 TRS903 GOL904 GOL905 GOL906 GOL907 GOL908
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany