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Title | THE QUORUM QUENCHING N-ACYL HOMOSERINE LACTONE ACYLASE PVDQ WITH A COVALENTLY BOUND DODECANOIC ACID | |
Keywords | ZYMOGEN, HYDROLASE, PERIPLASM | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2WYB | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT ALPHA | A | 164 | 1264 | 0 |
2 | Protein | ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT BETA | B | 546 | 4266 | 0 |
3 | Ligand | ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT ALPHA | A | 2 | 0 | 12 |
4 | Ligand | ACYL-HOMOSERINE LACTONE ACYLASE PVDQ SUBUNIT BETA | B | 5 | 0 | 37 |
5 | Water | 324 | 0 | 324 | ||
total | 1041 | 5530 | 373 |
Unit 1 | THR6 GLY7 LEU8 ALA9 ALA10 ASP11 ILE12 ARG13 TRP14 THR15 ALA16 TYR17 GLY18 VAL19 PRO20 HIS21 ILE22 ARG23 ALA24 LYS25 ASP26 GLU27 ARG28 GLY29 LEU30 GLY31 TYR32 GLY33 ILE34 GLY35 TYR36 ALA37 TYR38 ALA39 ARG40 ASP41 ASN42 ALA43 CYS44 LEU45 LEU46 ALA47 GLU48 GLU49 ILE50 VAL51 THR52 ALA53 ARG54 GLY55 GLU56 ARG57 ALA58 ARG59 TYR60 PHE61 GLY62 SER63 GLU64 GLY65 LYS66 SER67 SER68 ALA69 GLU70 LEU71 ASP72 ASN73 LEU74 PRO75 SER76 ASP77 ILE78 PHE79 TYR80 ALA81 TRP82 LEU83 ASN84 GLN85 PRO86 GLU87 ALA88 LEU89 GLN90 ALA91 PHE92 TRP93 GLN94 ALA95 GLN96 THR97 PRO98 ALA99 VAL100 ARG101 GLN102 LEU103 LEU104 GLU105 GLY106 TYR107 ALA108 ALA109 GLY110 PHE111 ASN112 ARG113 PHE114 LEU115 ARG116 GLU117 ALA118 ASP119 GLY120 LYS121 THR122 THR123 SER124 CYS125 LEU126 GLY127 GLN128 PRO129 TRP130 LEU131 ARG132 ALA133 ILE134 ALA135 THR136 ASP137 ASP138 LEU139 LEU140 ARG141 LEU142 THR143 ARG144 ARG145 LEU146 LEU147 VAL148 GLU149 GLY150 GLY151 VAL152 GLY153 GLN154 PHE155 ALA156 ASP157 ALA158 LEU159 VAL160 ALA161 ALA162 ALA163 PRO164 PRO165 GLY166 ALA167 GLU168 LYS169 |
Unit 2 | SER1 ASN2 ALA3 ILE4 ALA5 VAL6 GLY7 SER8 GLU9 ARG10 SER11 ALA12 ASP13 GLY14 LYS15 GLY16 MET17 LEU18 LEU19 ALA20 ASN21 PRO22 HIS23 PHE24 PRO25 TRP26 ASN27 GLY28 ALA29 MET30 ARG31 PHE32 TYR33 GLN34 MET35 HIS36 LEU37 THR38 ILE39 PRO40 GLY41 ARG42 LEU43 ASP44 VAL45 MET46 GLY47 ALA48 SER49 LEU50 PRO51 GLY52 LEU53 PRO54 VAL55 VAL56 ASN57 ILE58 GLY59 PHE60 SER61 ARG62 HIS63 LEU64 ALA65 TRP66 THR67 HIS68 THR69 VAL70 ASP71 THR72 SER73 SER74 HIS75 PHE76 THR77 LEU78 TYR79 ARG80 LEU81 ALA82 LEU83 ASP84 PRO85 LYS86 ASP87 PRO88 ARG89 ARG90 TYR91 LEU92 VAL93 ASP94 GLY95 ARG96 SER97 LEU98 PRO99 LEU100 GLU101 GLU102 LYS103 SER104 VAL105 ALA106 ILE107 GLU108 VAL109 ARG110 GLY111 ALA112 ASP113 GLY114 LYS115 LEU116 SER117 ARG118 VAL119 GLU120 HIS121 LYS122 VAL123 TYR124 GLN125 SER126 ILE127 TYR128 GLY129 PRO130 LEU131 VAL132 VAL133 TRP134 PRO135 GLY136 LYS137 LEU138 ASP139 TRP140 ASN141 ARG142 SER143 GLU144 ALA145 TYR146 ALA147 LEU148 ARG149 ASP150 ALA151 ASN152 LEU153 GLU154 ASN155 THR156 ARG157 VAL158 LEU159 GLN160 GLN161 TRP162 TYR163 SER164 ILE165 ASN166 GLN167 ALA168 SER169 ASP170 VAL171 ALA172 ASP173 LEU174 ARG175 ARG176 ARG177 VAL178 GLU179 ALA180 LEU181 GLN182 GLY183 ILE184 PRO185 TRP186 VAL187 ASN188 THR189 LEU190 ALA191 ALA192 ASP193 GLU194 GLN195 GLY196 ASN197 ALA198 LEU199 TYR200 MET201 ASN202 GLN203 SER204 VAL205 VAL206 PRO207 TYR208 LEU209 LYS210 PRO211 GLU212 LEU213 ILE214 PRO215 ALA216 CYS217 ALA218 ILE219 PRO220 GLN221 LEU222 VAL223 ALA224 GLU225 GLY226 LEU227 PRO228 ALA229 LEU230 GLN231 GLY232 GLN233 ASP234 SER235 ARG236 CYS237 ALA238 TRP239 SER240 ARG241 ASP242 PRO243 ALA244 ALA245 ALA246 GLN247 ALA248 GLY249 ILE250 THR251 PRO252 ALA253 ALA254 GLN255 LEU256 PRO257 VAL258 LEU259 LEU260 ARG261 ARG262 ASP263 PHE264 VAL265 GLN266 ASN267 SER268 ASN269 ASP270 SER271 ALA272 TRP273 LEU274 THR275 ASN276 PRO277 ALA278 SER279 PRO280 LEU281 GLN282 GLY283 PHE284 SER285 PRO286 LEU287 VAL288 SER289 GLN290 GLU291 LYS292 PRO293 ILE294 GLY295 PRO296 ARG297 ALA298 ARG299 TYR300 ALA301 LEU302 SER303 ARG304 LEU305 GLN306 GLY307 LYS308 GLN309 PRO310 LEU311 GLU312 ALA313 LYS314 THR315 LEU316 GLU317 GLU318 MET319 VAL320 THR321 ALA322 ASN323 HIS324 VAL325 PHE326 SER327 ALA328 ASP329 GLN330 VAL331 LEU332 PRO333 ASP334 LEU335 LEU336 ARG337 LEU338 CYS339 ARG340 ASP341 ASN342 GLN343 GLY344 GLU345 LYS346 SER347 LEU348 ALA349 ARG350 ALA351 CYS352 ALA353 ALA354 LEU355 ALA356 GLN357 TRP358 ASP359 ARG360 GLY361 ALA362 ASN363 LEU364 ASP365 SER366 GLY367 SER368 GLY369 PHE370 VAL371 TYR372 PHE373 GLN374 ARG375 PHE376 MET377 GLN378 ARG379 PHE380 ALA381 GLU382 LEU383 ASP384 GLY385 ALA386 TRP387 LYS388 GLU389 PRO390 PHE391 ASP392 ALA393 GLN394 ARG395 PRO396 LEU397 ASP398 THR399 PRO400 GLN401 GLY402 ILE403 ALA404 LEU405 ASP406 ARG407 PRO408 GLN409 VAL410 ALA411 THR412 GLN413 VAL414 ARG415 GLN416 ALA417 LEU418 ALA419 ASP420 ALA421 ALA422 ALA423 GLU424 VAL425 GLU426 LYS427 SER428 GLY429 ILE430 PRO431 ASP432 GLY433 ALA434 ARG435 TRP436 GLY437 ASP438 LEU439 GLN440 VAL441 SER442 THR443 ARG444 GLY445 GLN446 GLU447 ARG448 ILE449 ALA450 ILE451 PRO452 GLY453 GLY454 ASP455 GLY456 HIS457 PHE458 GLY459 VAL460 TYR461 ASN462 ALA463 ILE464 GLN465 SER466 VAL467 ARG468 LYS469 GLY470 ASP471 HIS472 LEU473 GLU474 VAL475 VAL476 GLY477 GLY478 THR479 SER480 TYR481 ILE482 GLN483 LEU484 VAL485 THR486 PHE487 PRO488 GLU489 GLU490 GLY491 PRO492 LYS493 ALA494 ARG495 GLY496 LEU497 LEU498 ALA499 PHE500 SER501 GLN502 SER503 SER504 ASP505 PRO506 ARG507 SER508 PRO509 HIS510 TYR511 ARG512 ASP513 GLN514 THR515 GLU516 LEU517 PHE518 SER519 ARG520 GLN521 GLN522 TRP523 GLN524 THR525 LEU526 PRO527 PHE528 SER529 ASP530 ARG531 GLN532 ILE533 ASP534 ALA535 ASP536 PRO537 GLN538 LEU539 GLN540 ARG541 LEU542 SER543 ILE544 ARG545 GLU546 |
Unit 3 | GOL1170 GOL1171 |
Unit 4 | DAO1547 GOL1548 GOL1549 GOL1550 GOL1551 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |