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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL 3-HYDROXY-3- METHYLGLUTARYL-COENZYME A SYNTHASE 2 (HMGCS2)
Keywords STEROID BIOSYNTHESIS, CHOLESTEROL BIOSYNTHESIS, MITOCHONDRIA, MITOCHONDRION, PHOSPHOPROTEIN, MELAVONATE PATHWAY, STEROL BIOSYNTHESIS, THIOLASE, ACETYLATION, TRANSFERASE, LIPID SYNTHESIS, TRANSIT PEPTIDE, DISEASE MUTATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2WYA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  A 460 3549 0
2  Protein   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  B 460 3564 0
3  Protein   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  C 460 3542 0
4  Protein   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  D 460 3554 0
5  Ligand   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  A 2 0 64
6  Ligand   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  B 1 0 58
7  Ligand   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  C 1 0 58
8  Ligand   HYDROXYMETHYLGLUTARYL-COA SYNTHASE,  MITOCHONDRIAL  D 1 0 58
9 Water     1457 0 1457
total       3302 14209 1695
Proteins
Unit 1 SER49 MET50 PRO51 LYS52 ASP53 VAL54 GLY55 ILE56 LEU57 ALA58 LEU59 GLU60 VAL61 TYR62 PHE63 PRO64 ALA65 GLN66 TYR67 VAL68 ASP69 GLN70 THR71 ASP72 LEU73 GLU74 LYS75 TYR76 ASN77 ASN78 VAL79 GLU80 ALA81 GLY82 LYS83 TYR84 THR85 VAL86 GLY87 LEU88 GLY89 GLN90 THR91 ARG92 MET93 GLY94 PHE95 CYS96 SER97 VAL98 GLN99 GLU100 ASP101 ILE102 ASN103 SER104 LEU105 CYS106 LEU107 THR108 VAL109 VAL110 GLN111 ARG112 LEU113 MET114 GLU115 ARG116 ILE117 GLN118 LEU119 PRO120 TRP121 ASP122 SER123 VAL124 GLY125 ARG126 LEU127 GLU128 VAL129 GLY130 THR131 GLU132 THR133 ILE134 ILE135 ASP136 LYS137 SER138 LYS139 ALA140 VAL141 LYS142 THR143 VAL144 LEU145 MET146 GLU147 LEU148 PHE149 GLN150 ASP151 SER152 GLY153 ASN154 THR155 ASP156 ILE157 GLU158 GLY159 ILE160 ASP161 THR162 THR163 ASN164 ALA165 CYS166 TYR167 GLY168 GLY169 THR170 ALA171 SER172 LEU173 PHE174 ASN175 ALA176 ALA177 ASN178 TRP179 MET180 GLU181 SER182 SER183 SER184 TRP185 ASP186 GLY187 ARG188 TYR189 ALA190 MET191 VAL192 VAL193 CYS194 GLY195 ASP196 ILE197 ALA198 VAL199 TYR200 PRO201 SER202 GLY203 ASN204 ALA205 ARG206 PRO207 THR208 GLY209 GLY210 ALA211 GLY212 ALA213 VAL214 ALA215 MET216 LEU217 ILE218 GLY219 PRO220 LYS221 ALA222 PRO223 LEU224 ALA225 LEU226 GLU227 ARG228 GLY229 LEU230 ARG231 GLY232 THR233 HIS234 MET235 GLU236 ASN237 VAL238 TYR239 ASP240 PHE241 TYR242 LYS243 PRO244 ASN245 LEU246 ALA247 SER248 GLU249 TYR250 PRO251 ILE252 VAL253 ASP254 GLY255 LYS256 LEU257 SER258 ILE259 GLN260 CYS261 TYR262 LEU263 ARG264 ALA265 LEU266 ASP267 ARG268 CYS269 TYR270 THR271 SER272 TYR273 ARG274 LYS275 LYS276 ILE277 GLN278 ASN279 GLN280 TRP281 LYS282 GLN283 ALA284 GLY285 SER286 ASP287 ARG288 PRO289 PHE290 THR291 LEU292 ASP293 ASP294 LEU295 GLN296 TYR297 MET298 ILE299 PHE300 HIS301 THR302 PRO303 PHE304 CYS305 LYS306 MET307 VAL308 GLN309 LYS310 SER311 LEU312 ALA313 ARG314 LEU315 MET316 PHE317 ASN318 ASP319 PHE320 LEU321 SER322 ALA323 SER324 SER325 ASP326 THR327 GLN328 THR329 SER330 LEU331 TYR332 LYS333 GLY334 LEU335 GLU336 ALA337 PHE338 GLY339 GLY340 LEU341 LYS342 LEU343 GLU344 ASP345 THR346 TYR347 THR348 ASN349 LYS350 ASP351 LEU352 ASP353 LYS354 ALA355 LEU356 LEU357 LYS358 ALA359 SER360 GLN361 ASP362 MET363 PHE364 ASP365 LYS366 LYS367 THR368 LYS369 ALA370 SER371 LEU372 TYR373 LEU374 SER375 THR376 HIS377 ASN378 GLY379 ASN380 MET381 TYR382 THR383 SER384 SER385 LEU386 TYR387 GLY388 CYS389 LEU390 ALA391 SER392 LEU393 LEU394 SER395 HIS396 HIS397 SER398 ALA399 GLN400 GLU401 LEU402 ALA403 GLY404 SER405 ARG406 ILE407 GLY408 ALA409 PHE410 SER411 TYR412 GLY413 SER414 GLY415 LEU416 ALA417 ALA418 SER419 PHE420 PHE421 SER422 PHE423 ARG424 VAL425 SER426 GLN427 ASP428 ALA429 ALA430 PRO431 GLY432 SER433 PRO434 LEU435 ASP436 LYS437 LEU438 VAL439 SER440 SER441 THR442 SER443 ASP444 LEU445 PRO446 LYS447 ARG448 LEU449 ALA450 SER451 ARG452 LYS453 CYS454 VAL455 SER456 PRO457 GLU458 GLU459 PHE460 THR461 GLU462 ILE463 MET464 ASN465 GLN466 ARG467 GLU468 GLN469 PHE470 TYR471 HIS472 LYS473 VAL474 ASN475 PHE476 SER477 PRO478 PRO479 GLY480 ASP481 THR482 ASN483 SER484 LEU485 PHE486 PRO487 GLY488 THR489 TRP490 TYR491 LEU492 GLU493 ARG494 VAL495 ASP496 GLU497 GLN498 HIS499 ARG500 ARG501 LYS502 TYR503 ALA504 ARG505 ARG506 PRO507 VAL508
Unit 2 SER49 MET50 PRO51 LYS52 ASP53 VAL54 GLY55 ILE56 LEU57 ALA58 LEU59 GLU60 VAL61 TYR62 PHE63 PRO64 ALA65 GLN66 TYR67 VAL68 ASP69 GLN70 THR71 ASP72 LEU73 GLU74 LYS75 TYR76 ASN77 ASN78 VAL79 GLU80 ALA81 GLY82 LYS83 TYR84 THR85 VAL86 GLY87 LEU88 GLY89 GLN90 THR91 ARG92 MET93 GLY94 PHE95 CYS96 SER97 VAL98 GLN99 GLU100 ASP101 ILE102 ASN103 SER104 LEU105 CYS106 LEU107 THR108 VAL109 VAL110 GLN111 ARG112 LEU113 MET114 GLU115 ARG116 ILE117 GLN118 LEU119 PRO120 TRP121 ASP122 SER123 VAL124 GLY125 ARG126 LEU127 GLU128 VAL129 GLY130 THR131 GLU132 THR133 ILE134 ILE135 ASP136 LYS137 SER138 LYS139 ALA140 VAL141 LYS142 THR143 VAL144 LEU145 MET146 GLU147 LEU148 PHE149 GLN150 ASP151 SER152 GLY153 ASN154 THR155 ASP156 ILE157 GLU158 GLY159 ILE160 ASP161 THR162 THR163 ASN164 ALA165 CYS166 TYR167 GLY168 GLY169 THR170 ALA171 SER172 LEU173 PHE174 ASN175 ALA176 ALA177 ASN178 TRP179 MET180 GLU181 SER182 SER183 SER184 TRP185 ASP186 GLY187 ARG188 TYR189 ALA190 MET191 VAL192 VAL193 CYS194 GLY195 ASP196 ILE197 ALA198 VAL199 TYR200 PRO201 SER202 GLY203 ASN204 ALA205 ARG206 PRO207 THR208 GLY209 GLY210 ALA211 GLY212 ALA213 VAL214 ALA215 MET216 LEU217 ILE218 GLY219 PRO220 LYS221 ALA222 PRO223 LEU224 ALA225 LEU226 GLU227 ARG228 GLY229 LEU230 ARG231 GLY232 THR233 HIS234 MET235 GLU236 ASN237 VAL238 TYR239 ASP240 PHE241 TYR242 LYS243 PRO244 ASN245 LEU246 ALA247 SER248 GLU249 TYR250 PRO251 ILE252 VAL253 ASP254 GLY255 LYS256 LEU257 SER258 ILE259 GLN260 CYS261 TYR262 LEU263 ARG264 ALA265 LEU266 ASP267 ARG268 CYS269 TYR270 THR271 SER272 TYR273 ARG274 LYS275 LYS276 ILE277 GLN278 ASN279 GLN280 TRP281 LYS282 GLN283 ALA284 GLY285 SER286 ASP287 ARG288 PRO289 PHE290 THR291 LEU292 ASP293 ASP294 LEU295 GLN296 TYR297 MET298 ILE299 PHE300 HIS301 THR302 PRO303 PHE304 CYS305 LYS306 MET307 VAL308 GLN309 LYS310 SER311 LEU312 ALA313 ARG314 LEU315 MET316 PHE317 ASN318 ASP319 PHE320 LEU321 SER322 ALA323 SER324 SER325 ASP326 THR327 GLN328 THR329 SER330 LEU331 TYR332 LYS333 GLY334 LEU335 GLU336 ALA337 PHE338 GLY339 GLY340 LEU341 LYS342 LEU343 GLU344 ASP345 THR346 TYR347 THR348 ASN349 LYS350 ASP351 LEU352 ASP353 LYS354 ALA355 LEU356 LEU357 LYS358 ALA359 SER360 GLN361 ASP362 MET363 PHE364 ASP365 LYS366 LYS367 THR368 LYS369 ALA370 SER371 LEU372 TYR373 LEU374 SER375 THR376 HIS377 ASN378 GLY379 ASN380 MET381 TYR382 THR383 SER384 SER385 LEU386 TYR387 GLY388 CYS389 LEU390 ALA391 SER392 LEU393 LEU394 SER395 HIS396 HIS397 SER398 ALA399 GLN400 GLU401 LEU402 ALA403 GLY404 SER405 ARG406 ILE407 GLY408 ALA409 PHE410 SER411 TYR412 GLY413 SER414 GLY415 LEU416 ALA417 ALA418 SER419 PHE420 PHE421 SER422 PHE423 ARG424 VAL425 SER426 GLN427 ASP428 ALA429 ALA430 PRO431 GLY432 SER433 PRO434 LEU435 ASP436 LYS437 LEU438 VAL439 SER440 SER441 THR442 SER443 ASP444 LEU445 PRO446 LYS447 ARG448 LEU449 ALA450 SER451 ARG452 LYS453 CYS454 VAL455 SER456 PRO457 GLU458 GLU459 PHE460 THR461 GLU462 ILE463 MET464 ASN465 GLN466 ARG467 GLU468 GLN469 PHE470 TYR471 HIS472 LYS473 VAL474 ASN475 PHE476 SER477 PRO478 PRO479 GLY480 ASP481 THR482 ASN483 SER484 LEU485 PHE486 PRO487 GLY488 THR489 TRP490 TYR491 LEU492 GLU493 ARG494 VAL495 ASP496 GLU497 GLN498 HIS499 ARG500 ARG501 LYS502 TYR503 ALA504 ARG505 ARG506 PRO507 VAL508
Unit 3 SER49 MET50 PRO51 LYS52 ASP53 VAL54 GLY55 ILE56 LEU57 ALA58 LEU59 GLU60 VAL61 TYR62 PHE63 PRO64 ALA65 GLN66 TYR67 VAL68 ASP69 GLN70 THR71 ASP72 LEU73 GLU74 LYS75 TYR76 ASN77 ASN78 VAL79 GLU80 ALA81 GLY82 LYS83 TYR84 THR85 VAL86 GLY87 LEU88 GLY89 GLN90 THR91 ARG92 MET93 GLY94 PHE95 CYS96 SER97 VAL98 GLN99 GLU100 ASP101 ILE102 ASN103 SER104 LEU105 CYS106 LEU107 THR108 VAL109 VAL110 GLN111 ARG112 LEU113 MET114 GLU115 ARG116 ILE117 GLN118 LEU119 PRO120 TRP121 ASP122 SER123 VAL124 GLY125 ARG126 LEU127 GLU128 VAL129 GLY130 THR131 GLU132 THR133 ILE134 ILE135 ASP136 LYS137 SER138 LYS139 ALA140 VAL141 LYS142 THR143 VAL144 LEU145 MET146 GLU147 LEU148 PHE149 GLN150 ASP151 SER152 GLY153 ASN154 THR155 ASP156 ILE157 GLU158 GLY159 ILE160 ASP161 THR162 THR163 ASN164 ALA165 CYS166 TYR167 GLY168 GLY169 THR170 ALA171 SER172 LEU173 PHE174 ASN175 ALA176 ALA177 ASN178 TRP179 MET180 GLU181 SER182 SER183 SER184 TRP185 ASP186 GLY187 ARG188 TYR189 ALA190 MET191 VAL192 VAL193 CYS194 GLY195 ASP196 ILE197 ALA198 VAL199 TYR200 PRO201 SER202 GLY203 ASN204 ALA205 ARG206 PRO207 THR208 GLY209 GLY210 ALA211 GLY212 ALA213 VAL214 ALA215 MET216 LEU217 ILE218 GLY219 PRO220 LYS221 ALA222 PRO223 LEU224 ALA225 LEU226 GLU227 ARG228 GLY229 LEU230 ARG231 GLY232 THR233 HIS234 MET235 GLU236 ASN237 VAL238 TYR239 ASP240 PHE241 TYR242 LYS243 PRO244 ASN245 LEU246 ALA247 SER248 GLU249 TYR250 PRO251 ILE252 VAL253 ASP254 GLY255 LYS256 LEU257 SER258 ILE259 GLN260 CYS261 TYR262 LEU263 ARG264 ALA265 LEU266 ASP267 ARG268 CYS269 TYR270 THR271 SER272 TYR273 ARG274 LYS275 LYS276 ILE277 GLN278 ASN279 GLN280 TRP281 LYS282 GLN283 ALA284 GLY285 SER286 ASP287 ARG288 PRO289 PHE290 THR291 LEU292 ASP293 ASP294 LEU295 GLN296 TYR297 MET298 ILE299 PHE300 HIS301 THR302 PRO303 PHE304 CYS305 LYS306 MET307 VAL308 GLN309 LYS310 SER311 LEU312 ALA313 ARG314 LEU315 MET316 PHE317 ASN318 ASP319 PHE320 LEU321 SER322 ALA323 SER324 SER325 ASP326 THR327 GLN328 THR329 SER330 LEU331 TYR332 LYS333 GLY334 LEU335 GLU336 ALA337 PHE338 GLY339 GLY340 LEU341 LYS342 LEU343 GLU344 ASP345 THR346 TYR347 THR348 ASN349 LYS350 ASP351 LEU352 ASP353 LYS354 ALA355 LEU356 LEU357 LYS358 ALA359 SER360 GLN361 ASP362 MET363 PHE364 ASP365 LYS366 LYS367 THR368 LYS369 ALA370 SER371 LEU372 TYR373 LEU374 SER375 THR376 HIS377 ASN378 GLY379 ASN380 MET381 TYR382 THR383 SER384 SER385 LEU386 TYR387 GLY388 CYS389 LEU390 ALA391 SER392 LEU393 LEU394 SER395 HIS396 HIS397 SER398 ALA399 GLN400 GLU401 LEU402 ALA403 GLY404 SER405 ARG406 ILE407 GLY408 ALA409 PHE410 SER411 TYR412 GLY413 SER414 GLY415 LEU416 ALA417 ALA418 SER419 PHE420 PHE421 SER422 PHE423 ARG424 VAL425 SER426 GLN427 ASP428 ALA429 ALA430 PRO431 GLY432 SER433 PRO434 LEU435 ASP436 LYS437 LEU438 VAL439 SER440 SER441 THR442 SER443 ASP444 LEU445 PRO446 LYS447 ARG448 LEU449 ALA450 SER451 ARG452 LYS453 CYS454 VAL455 SER456 PRO457 GLU458 GLU459 PHE460 THR461 GLU462 ILE463 MET464 ASN465 GLN466 ARG467 GLU468 GLN469 PHE470 TYR471 HIS472 LYS473 VAL474 ASN475 PHE476 SER477 PRO478 PRO479 GLY480 ASP481 THR482 ASN483 SER484 LEU485 PHE486 PRO487 GLY488 THR489 TRP490 TYR491 LEU492 GLU493 ARG494 VAL495 ASP496 GLU497 GLN498 HIS499 ARG500 ARG501 LYS502 TYR503 ALA504 ARG505 ARG506 PRO507 VAL508
Unit 4 SER49 MET50 PRO51 LYS52 ASP53 VAL54 GLY55 ILE56 LEU57 ALA58 LEU59 GLU60 VAL61 TYR62 PHE63 PRO64 ALA65 GLN66 TYR67 VAL68 ASP69 GLN70 THR71 ASP72 LEU73 GLU74 LYS75 TYR76 ASN77 ASN78 VAL79 GLU80 ALA81 GLY82 LYS83 TYR84 THR85 VAL86 GLY87 LEU88 GLY89 GLN90 THR91 ARG92 MET93 GLY94 PHE95 CYS96 SER97 VAL98 GLN99 GLU100 ASP101 ILE102 ASN103 SER104 LEU105 CYS106 LEU107 THR108 VAL109 VAL110 GLN111 ARG112 LEU113 MET114 GLU115 ARG116 ILE117 GLN118 LEU119 PRO120 TRP121 ASP122 SER123 VAL124 GLY125 ARG126 LEU127 GLU128 VAL129 GLY130 THR131 GLU132 THR133 ILE134 ILE135 ASP136 LYS137 SER138 LYS139 ALA140 VAL141 LYS142 THR143 VAL144 LEU145 MET146 GLU147 LEU148 PHE149 GLN150 ASP151 SER152 GLY153 ASN154 THR155 ASP156 ILE157 GLU158 GLY159 ILE160 ASP161 THR162 THR163 ASN164 ALA165 CYS166 TYR167 GLY168 GLY169 THR170 ALA171 SER172 LEU173 PHE174 ASN175 ALA176 ALA177 ASN178 TRP179 MET180 GLU181 SER182 SER183 SER184 TRP185 ASP186 GLY187 ARG188 TYR189 ALA190 MET191 VAL192 VAL193 CYS194 GLY195 ASP196 ILE197 ALA198 VAL199 TYR200 PRO201 SER202 GLY203 ASN204 ALA205 ARG206 PRO207 THR208 GLY209 GLY210 ALA211 GLY212 ALA213 VAL214 ALA215 MET216 LEU217 ILE218 GLY219 PRO220 LYS221 ALA222 PRO223 LEU224 ALA225 LEU226 GLU227 ARG228 GLY229 LEU230 ARG231 GLY232 THR233 HIS234 MET235 GLU236 ASN237 VAL238 TYR239 ASP240 PHE241 TYR242 LYS243 PRO244 ASN245 LEU246 ALA247 SER248 GLU249 TYR250 PRO251 ILE252 VAL253 ASP254 GLY255 LYS256 LEU257 SER258 ILE259 GLN260 CYS261 TYR262 LEU263 ARG264 ALA265 LEU266 ASP267 ARG268 CYS269 TYR270 THR271 SER272 TYR273 ARG274 LYS275 LYS276 ILE277 GLN278 ASN279 GLN280 TRP281 LYS282 GLN283 ALA284 GLY285 SER286 ASP287 ARG288 PRO289 PHE290 THR291 LEU292 ASP293 ASP294 LEU295 GLN296 TYR297 MET298 ILE299 PHE300 HIS301 THR302 PRO303 PHE304 CYS305 LYS306 MET307 VAL308 GLN309 LYS310 SER311 LEU312 ALA313 ARG314 LEU315 MET316 PHE317 ASN318 ASP319 PHE320 LEU321 SER322 ALA323 SER324 SER325 ASP326 THR327 GLN328 THR329 SER330 LEU331 TYR332 LYS333 GLY334 LEU335 GLU336 ALA337 PHE338 GLY339 GLY340 LEU341 LYS342 LEU343 GLU344 ASP345 THR346 TYR347 THR348 ASN349 LYS350 ASP351 LEU352 ASP353 LYS354 ALA355 LEU356 LEU357 LYS358 ALA359 SER360 GLN361 ASP362 MET363 PHE364 ASP365 LYS366 LYS367 THR368 LYS369 ALA370 SER371 LEU372 TYR373 LEU374 SER375 THR376 HIS377 ASN378 GLY379 ASN380 MET381 TYR382 THR383 SER384 SER385 LEU386 TYR387 GLY388 CYS389 LEU390 ALA391 SER392 LEU393 LEU394 SER395 HIS396 HIS397 SER398 ALA399 GLN400 GLU401 LEU402 ALA403 GLY404 SER405 ARG406 ILE407 GLY408 ALA409 PHE410 SER411 TYR412 GLY413 SER414 GLY415 LEU416 ALA417 ALA418 SER419 PHE420 PHE421 SER422 PHE423 ARG424 VAL425 SER426 GLN427 ASP428 ALA429 ALA430 PRO431 GLY432 SER433 PRO434 LEU435 ASP436 LYS437 LEU438 VAL439 SER440 SER441 THR442 SER443 ASP444 LEU445 PRO446 LYS447 ARG448 LEU449 ALA450 SER451 ARG452 LYS453 CYS454 VAL455 SER456 PRO457 GLU458 GLU459 PHE460 THR461 GLU462 ILE463 MET464 ASN465 GLN466 ARG467 GLU468 GLN469 PHE470 TYR471 HIS472 LYS473 VAL474 ASN475 PHE476 SER477 PRO478 PRO479 GLY480 ASP481 THR482 ASN483 SER484 LEU485 PHE486 PRO487 GLY488 THR489 TRP490 TYR491 LEU492 GLU493 ARG494 VAL495 ASP496 GLU497 GLN498 HIS499 ARG500 ARG501 LYS502 TYR503 ALA504 ARG505 ARG506 PRO507 VAL508
Ligands
Unit 5 HMG1509 GOL1510
Unit 6 HMG1509
Unit 7 HMG1509
Unit 8 HMG1509
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany