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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FOOT-AND-MOUTH DISEASE VIRUS 3C PROTEASE IN COMPLEX WITH A DECAMERIC PEPTIDE CORRESPONDING TO THE VP1-2A CLEAVAGE JUNCTION WITH A GLN TO GLU SUBSTITUTION AT P1
Keywords 3C PROTEASE, HYDROLASE, VIRAL PROTEIN, HYDROLASE PEPTIDE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2WV5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PICORNAIN 3C  A 200 1435 0
2  Protein   PICORNAIN 3C  B 200 1440 0
3  Protein   PICORNAIN 3C  C 200 1435 0
4  Protein   PICORNAIN 3C  D 200 1442 0
5  Protein   FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A)  VARIANT VP1 CAPSID PROTEIN  E 10 70 3
6  Protein   FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A)  VARIANT VP1 CAPSID PROTEIN  F 10 70 3
7  Protein   FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A)  VARIANT VP1 CAPSID PROTEIN  G 10 70 3
8  Protein   FOOT AND MOUTH DISEASE VIRUS (SEROTYPE A)  VARIANT VP1 CAPSID PROTEIN  H 10 70 3
9 Water     51 0 52
total       891 6032 64

Proteins
Unit 1 ASP7 LEU8 GLN9 LYS10 MET11 VAL12 MET13 GLY14 ASN15 THR16 LYS17 PRO18 VAL19 GLU20 LEU21 ILE22 LEU23 ASP24 GLY25 LYS26 THR27 VAL28 ALA29 ILE30 CYS31 CYS32 ALA33 THR34 GLY35 VAL36 PHE37 GLY38 THR39 ALA40 TYR41 LEU42 VAL43 PRO44 ARG45 HIS46 LEU47 PHE48 ALA49 GLU50 LYS51 TYR52 ASP53 LYS54 ILE55 MET56 LEU57 ASP58 GLY59 ARG60 ALA61 MET62 THR63 ASP64 SER65 ASP66 TYR67 ARG68 VAL69 PHE70 GLU71 PHE72 GLU73 ILE74 LYS75 VAL76 LYS77 GLY78 GLN79 ASP80 MET81 LEU82 SER83 ASP84 ALA85 ALA86 LEU87 MET88 VAL89 LEU90 HIS91 ARG92 GLY93 ASN94 LYS95 VAL96 ARG97 ASP98 ILE99 THR100 LYS101 HIS102 PHE103 ARG104 ASP105 THR106 ALA107 ARG108 MET109 LYS110 LYS111 GLY112 THR113 PRO114 VAL115 VAL116 GLY117 VAL118 VAL119 ASN120 ASN121 ALA122 ASP123 VAL124 GLY125 ARG126 LEU127 ILE128 PHE129 SER130 GLY131 GLU132 ALA133 LEU134 THR135 TYR136 LYS137 ASP138 ILE139 VAL140 VAL141 LEU142 MET143 ASP144 GLY145 ASP146 THR147 MET148 PRO149 GLY150 LEU151 PHE152 ALA153 TYR154 LYS155 ALA156 ALA157 THR158 ARG159 ALA160 GLY161 TYR162 ALA163 GLY164 GLY165 ALA166 VAL167 LEU168 ALA169 LYS170 ASP171 GLY172 ALA173 ASP174 THR175 PHE176 ILE177 VAL178 GLY179 THR180 HIS181 SER182 ALA183 GLY184 GLY185 ASN186 GLY187 VAL188 GLY189 TYR190 CYS191 SER192 CYS193 VAL194 SER195 ARG196 SER197 MET198 LEU199 GLN200 LYS201 MET202 LYS203 ALA204 HIS205 VAL206
Unit 2 ASP7 LEU8 GLN9 LYS10 MET11 VAL12 MET13 GLY14 ASN15 THR16 LYS17 PRO18 VAL19 GLU20 LEU21 ILE22 LEU23 ASP24 GLY25 LYS26 THR27 VAL28 ALA29 ILE30 CYS31 CYS32 ALA33 THR34 GLY35 VAL36 PHE37 GLY38 THR39 ALA40 TYR41 LEU42 VAL43 PRO44 ARG45 HIS46 LEU47 PHE48 ALA49 GLU50 LYS51 TYR52 ASP53 LYS54 ILE55 MET56 LEU57 ASP58 GLY59 ARG60 ALA61 MET62 THR63 ASP64 SER65 ASP66 TYR67 ARG68 VAL69 PHE70 GLU71 PHE72 GLU73 ILE74 LYS75 VAL76 LYS77 GLY78 GLN79 ASP80 MET81 LEU82 SER83 ASP84 ALA85 ALA86 LEU87 MET88 VAL89 LEU90 HIS91 ARG92 GLY93 ASN94 LYS95 VAL96 ARG97 ASP98 ILE99 THR100 LYS101 HIS102 PHE103 ARG104 ASP105 THR106 ALA107 ARG108 MET109 LYS110 LYS111 GLY112 THR113 PRO114 VAL115 VAL116 GLY117 VAL118 VAL119 ASN120 ASN121 ALA122 ASP123 VAL124 GLY125 ARG126 LEU127 ILE128 PHE129 SER130 GLY131 GLU132 ALA133 LEU134 THR135 TYR136 LYS137 ASP138 ILE139 VAL140 VAL141 LEU142 MET143 ASP144 GLY145 ASP146 THR147 MET148 PRO149 GLY150 LEU151 PHE152 ALA153 TYR154 LYS155 ALA156 ALA157 THR158 ARG159 ALA160 GLY161 TYR162 ALA163 GLY164 GLY165 ALA166 VAL167 LEU168 ALA169 LYS170 ASP171 GLY172 ALA173 ASP174 THR175 PHE176 ILE177 VAL178 GLY179 THR180 HIS181 SER182 ALA183 GLY184 GLY185 ASN186 GLY187 VAL188 GLY189 TYR190 CYS191 SER192 CYS193 VAL194 SER195 ARG196 SER197 MET198 LEU199 GLN200 LYS201 MET202 LYS203 ALA204 HIS205 VAL206
Unit 3 ASP7 LEU8 GLN9 LYS10 MET11 VAL12 MET13 GLY14 ASN15 THR16 LYS17 PRO18 VAL19 GLU20 LEU21 ILE22 LEU23 ASP24 GLY25 LYS26 THR27 VAL28 ALA29 ILE30 CYS31 CYS32 ALA33 THR34 GLY35 VAL36 PHE37 GLY38 THR39 ALA40 TYR41 LEU42 VAL43 PRO44 ARG45 HIS46 LEU47 PHE48 ALA49 GLU50 LYS51 TYR52 ASP53 LYS54 ILE55 MET56 LEU57 ASP58 GLY59 ARG60 ALA61 MET62 THR63 ASP64 SER65 ASP66 TYR67 ARG68 VAL69 PHE70 GLU71 PHE72 GLU73 ILE74 LYS75 VAL76 LYS77 GLY78 GLN79 ASP80 MET81 LEU82 SER83 ASP84 ALA85 ALA86 LEU87 MET88 VAL89 LEU90 HIS91 ARG92 GLY93 ASN94 LYS95 VAL96 ARG97 ASP98 ILE99 THR100 LYS101 HIS102 PHE103 ARG104 ASP105 THR106 ALA107 ARG108 MET109 LYS110 LYS111 GLY112 THR113 PRO114 VAL115 VAL116 GLY117 VAL118 VAL119 ASN120 ASN121 ALA122 ASP123 VAL124 GLY125 ARG126 LEU127 ILE128 PHE129 SER130 GLY131 GLU132 ALA133 LEU134 THR135 TYR136 LYS137 ASP138 ILE139 VAL140 VAL141 LEU142 MET143 ASP144 GLY145 ASP146 THR147 MET148 PRO149 GLY150 LEU151 PHE152 ALA153 TYR154 LYS155 ALA156 ALA157 THR158 ARG159 ALA160 GLY161 TYR162 ALA163 GLY164 GLY165 ALA166 VAL167 LEU168 ALA169 LYS170 ASP171 GLY172 ALA173 ASP174 THR175 PHE176 ILE177 VAL178 GLY179 THR180 HIS181 SER182 ALA183 GLY184 GLY185 ASN186 GLY187 VAL188 GLY189 TYR190 CYS191 SER192 CYS193 VAL194 SER195 ARG196 SER197 MET198 LEU199 GLN200 LYS201 MET202 LYS203 ALA204 HIS205 VAL206
Unit 4 ASP7 LEU8 GLN9 LYS10 MET11 VAL12 MET13 GLY14 ASN15 THR16 LYS17 PRO18 VAL19 GLU20 LEU21 ILE22 LEU23 ASP24 GLY25 LYS26 THR27 VAL28 ALA29 ILE30 CYS31 CYS32 ALA33 THR34 GLY35 VAL36 PHE37 GLY38 THR39 ALA40 TYR41 LEU42 VAL43 PRO44 ARG45 HIS46 LEU47 PHE48 ALA49 GLU50 LYS51 TYR52 ASP53 LYS54 ILE55 MET56 LEU57 ASP58 GLY59 ARG60 ALA61 MET62 THR63 ASP64 SER65 ASP66 TYR67 ARG68 VAL69 PHE70 GLU71 PHE72 GLU73 ILE74 LYS75 VAL76 LYS77 GLY78 GLN79 ASP80 MET81 LEU82 SER83 ASP84 ALA85 ALA86 LEU87 MET88 VAL89 LEU90 HIS91 ARG92 GLY93 ASN94 LYS95 VAL96 ARG97 ASP98 ILE99 THR100 LYS101 HIS102 PHE103 ARG104 ASP105 THR106 ALA107 ARG108 MET109 LYS110 LYS111 GLY112 THR113 PRO114 VAL115 VAL116 GLY117 VAL118 VAL119 ASN120 ASN121 ALA122 ASP123 VAL124 GLY125 ARG126 LEU127 ILE128 PHE129 SER130 GLY131 GLU132 ALA133 LEU134 THR135 TYR136 LYS137 ASP138 ILE139 VAL140 VAL141 LEU142 MET143 ASP144 GLY145 ASP146 THR147 MET148 PRO149 GLY150 LEU151 PHE152 ALA153 TYR154 LYS155 ALA156 ALA157 THR158 ARG159 ALA160 GLY161 TYR162 ALA163 GLY164 GLY165 ALA166 VAL167 LEU168 ALA169 LYS170 ASP171 GLY172 ALA173 ASP174 THR175 PHE176 ILE177 VAL178 GLY179 THR180 HIS181 SER182 ALA183 GLY184 GLY185 ASN186 GLY187 VAL188 GLY189 TYR190 CYS191 SER192 CYS193 VAL194 SER195 ARG196 SER197 MET198 LEU199 GLN200 LYS201 MET202 LYS203 ALA204 HIS205 VAL206
Unit 5 ACE1 ALA2 PRO3 ALA4 LYS5 GLU6 LEU7 LEU8 ASN9 PHE10
Unit 6 ACE1 ALA2 PRO3 ALA4 LYS5 GLU6 LEU7 LEU8 ASN9 PHE10
Unit 7 ACE1 ALA2 PRO3 ALA4 LYS5 GLU6 LEU7 LEU8 ASN9 PHE10
Unit 8 ACE1 ALA2 PRO3 ALA4 LYS5 GLU6 LEU7 LEU8 ASN9 PHE10

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany