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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DISCOIDIN I FROM DICTYOSTELIUM DISCOIDE COMPLEX WITH THE DISACCHARIDE GALNAC BETA 1-3 GALACTOSE, AT RESOLUTION.
Keywords TYPE-H LECTIN, CELL ADHESION, DISCOIDIN DOMAIN, LECTIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2WN3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DISCOIDIN-1 SUBUNIT A  A 254 1995 0
2  Protein   DISCOIDIN-1 SUBUNIT A  B 253 1990 0
3  Protein   DISCOIDIN-1 SUBUNIT A  C 252 1982 0
4  Ligand    D 2 0 26
5  Ligand    E 2 0 26
6  Ligand    F 2 0 26
7  Ligand   DISCOIDIN-1 SUBUNIT A  A 4 0 28
8  Ligand   DISCOIDIN-1 SUBUNIT A  B 3 0 12
9  Ligand   DISCOIDIN-1 SUBUNIT A  C 3 0 13
10 Water     1121 0 1121
total       1896 5967 1252

Proteins
Unit 1 ALA0 MET1 SER2 THR3 GLN4 GLY5 LEU6 VAL7 GLN8 LEU9 LEU10 ALA11 ASN12 ALA13 GLN14 CYS15 HIS16 LEU17 ARG18 THR19 SER20 THR21 ASN22 TYR23 ASN24 GLY25 VAL26 HIS27 THR28 GLN29 PHE30 ASN31 SER32 ALA33 LEU34 ASN35 TYR36 LYS37 ASN38 ASN39 GLY40 THR41 ASN42 THR43 ILE44 ASP45 GLY46 SER47 GLU48 ALA49 TRP50 CYS51 SER52 SER53 ILE54 VAL55 ASP56 THR57 ASN58 GLN59 TYR60 ILE61 VAL62 ALA63 GLY64 CYS65 GLU66 VAL67 PRO68 ARG69 THR70 PHE71 MET72 CYS73 VAL74 ALA75 LEU76 GLN77 GLY78 ARG79 GLY80 ASP81 ALA82 ASP83 GLN84 TRP85 VAL86 THR87 SER88 TYR89 LYS90 ILE91 ARG92 TYR93 SER94 LEU95 ASP96 ASN97 VAL98 SER99 TRP100 PHE101 GLU102 TYR103 ARG104 ASN105 GLY106 ALA107 ALA108 VAL109 THR110 GLY111 VAL112 THR113 ASP114 ARG115 ASN116 THR117 VAL118 VAL119 ASN120 HIS121 PHE122 PHE123 ASP124 THR125 PRO126 ILE127 ARG128 ALA129 ARG130 SER131 ILE132 ALA133 ILE134 HIS135 PRO136 LEU137 THR138 TRP139 ASN140 GLY141 HIS142 ILE143 SER144 LEU145 ARG146 CYS147 GLU148 PHE149 TYR150 THR151 GLN152 PRO153 VAL154 GLN155 SER156 SER157 VAL158 THR159 GLN160 VAL161 GLY162 ALA163 ASP164 ILE165 TYR166 THR167 GLY168 ASP169 ASN170 CYS171 ALA172 LEU173 ASN174 THR175 GLY176 SER177 GLY178 LYS179 ARG180 GLU181 VAL182 VAL183 VAL184 PRO185 VAL186 LYS187 PHE188 GLN189 PHE190 GLU191 PHE192 ALA193 THR194 LEU195 PRO196 LYS197 VAL198 ALA199 LEU200 ASN201 PHE202 ASP203 GLN204 ILE205 ASP206 CYS207 THR208 ASP209 ALA210 THR211 ASN212 GLN213 THR214 ARG215 ILE216 GLY217 VAL218 GLN219 PRO220 ARG221 ASN222 ILE223 THR224 THR225 LYS226 GLY227 PHE228 ASP229 CYS230 VAL231 PHE232 TYR233 THR234 TRP235 ASN236 GLU237 ASN238 LYS239 VAL240 TYR241 SER242 LEU243 ARG244 ALA245 ASP246 TYR247 ILE248 ALA249 THR250 ALA251 LEU252 GLU253
Unit 2 MET1 SER2 THR3 GLN4 GLY5 LEU6 VAL7 GLN8 LEU9 LEU10 ALA11 ASN12 ALA13 GLN14 CYS15 HIS16 LEU17 ARG18 THR19 SER20 THR21 ASN22 TYR23 ASN24 GLY25 VAL26 HIS27 THR28 GLN29 PHE30 ASN31 SER32 ALA33 LEU34 ASN35 TYR36 LYS37 ASN38 ASN39 GLY40 THR41 ASN42 THR43 ILE44 ASP45 GLY46 SER47 GLU48 ALA49 TRP50 CYS51 SER52 SER53 ILE54 VAL55 ASP56 THR57 ASN58 GLN59 TYR60 ILE61 VAL62 ALA63 GLY64 CYS65 GLU66 VAL67 PRO68 ARG69 THR70 PHE71 MET72 CYS73 VAL74 ALA75 LEU76 GLN77 GLY78 ARG79 GLY80 ASP81 ALA82 ASP83 GLN84 TRP85 VAL86 THR87 SER88 TYR89 LYS90 ILE91 ARG92 TYR93 SER94 LEU95 ASP96 ASN97 VAL98 SER99 TRP100 PHE101 GLU102 TYR103 ARG104 ASN105 GLY106 ALA107 ALA108 VAL109 THR110 GLY111 VAL112 THR113 ASP114 ARG115 ASN116 THR117 VAL118 VAL119 ASN120 HIS121 PHE122 PHE123 ASP124 THR125 PRO126 ILE127 ARG128 ALA129 ARG130 SER131 ILE132 ALA133 ILE134 HIS135 PRO136 LEU137 THR138 TRP139 ASN140 GLY141 HIS142 ILE143 SER144 LEU145 ARG146 CYS147 GLU148 PHE149 TYR150 THR151 GLN152 PRO153 VAL154 GLN155 SER156 SER157 VAL158 THR159 GLN160 VAL161 GLY162 ALA163 ASP164 ILE165 TYR166 THR167 GLY168 ASP169 ASN170 CYS171 ALA172 LEU173 ASN174 THR175 GLY176 SER177 GLY178 LYS179 ARG180 GLU181 VAL182 VAL183 VAL184 PRO185 VAL186 LYS187 PHE188 GLN189 PHE190 GLU191 PHE192 ALA193 THR194 LEU195 PRO196 LYS197 VAL198 ALA199 LEU200 ASN201 PHE202 ASP203 GLN204 ILE205 ASP206 CYS207 THR208 ASP209 ALA210 THR211 ASN212 GLN213 THR214 ARG215 ILE216 GLY217 VAL218 GLN219 PRO220 ARG221 ASN222 ILE223 THR224 THR225 LYS226 GLY227 PHE228 ASP229 CYS230 VAL231 PHE232 TYR233 THR234 TRP235 ASN236 GLU237 ASN238 LYS239 VAL240 TYR241 SER242 LEU243 ARG244 ALA245 ASP246 TYR247 ILE248 ALA249 THR250 ALA251 LEU252 GLU253
Unit 3 SER2 THR3 GLN4 GLY5 LEU6 VAL7 GLN8 LEU9 LEU10 ALA11 ASN12 ALA13 GLN14 CYS15 HIS16 LEU17 ARG18 THR19 SER20 THR21 ASN22 TYR23 ASN24 GLY25 VAL26 HIS27 THR28 GLN29 PHE30 ASN31 SER32 ALA33 LEU34 ASN35 TYR36 LYS37 ASN38 ASN39 GLY40 THR41 ASN42 THR43 ILE44 ASP45 GLY46 SER47 GLU48 ALA49 TRP50 CYS51 SER52 SER53 ILE54 VAL55 ASP56 THR57 ASN58 GLN59 TYR60 ILE61 VAL62 ALA63 GLY64 CYS65 GLU66 VAL67 PRO68 ARG69 THR70 PHE71 MET72 CYS73 VAL74 ALA75 LEU76 GLN77 GLY78 ARG79 GLY80 ASP81 ALA82 ASP83 GLN84 TRP85 VAL86 THR87 SER88 TYR89 LYS90 ILE91 ARG92 TYR93 SER94 LEU95 ASP96 ASN97 VAL98 SER99 TRP100 PHE101 GLU102 TYR103 ARG104 ASN105 GLY106 ALA107 ALA108 VAL109 THR110 GLY111 VAL112 THR113 ASP114 ARG115 ASN116 THR117 VAL118 VAL119 ASN120 HIS121 PHE122 PHE123 ASP124 THR125 PRO126 ILE127 ARG128 ALA129 ARG130 SER131 ILE132 ALA133 ILE134 HIS135 PRO136 LEU137 THR138 TRP139 ASN140 GLY141 HIS142 ILE143 SER144 LEU145 ARG146 CYS147 GLU148 PHE149 TYR150 THR151 GLN152 PRO153 VAL154 GLN155 SER156 SER157 VAL158 THR159 GLN160 VAL161 GLY162 ALA163 ASP164 ILE165 TYR166 THR167 GLY168 ASP169 ASN170 CYS171 ALA172 LEU173 ASN174 THR175 GLY176 SER177 GLY178 LYS179 ARG180 GLU181 VAL182 VAL183 VAL184 PRO185 VAL186 LYS187 PHE188 GLN189 PHE190 GLU191 PHE192 ALA193 THR194 LEU195 PRO196 LYS197 VAL198 ALA199 LEU200 ASN201 PHE202 ASP203 GLN204 ILE205 ASP206 CYS207 THR208 ASP209 ALA210 THR211 ASN212 GLN213 THR214 ARG215 ILE216 GLY217 VAL218 GLN219 PRO220 ARG221 ASN222 ILE223 THR224 THR225 LYS226 GLY227 PHE228 ASP229 CYS230 VAL231 PHE232 TYR233 THR234 TRP235 ASN236 GLU237 ASN238 LYS239 VAL240 TYR241 SER242 LEU243 ARG244 ALA245 ASP246 TYR247 ILE248 ALA249 THR250 ALA251 LEU252 GLU253

Ligands
Unit 4 GAL1 NGA2
Unit 5 GAL1 NGA2
Unit 6 GAL1 NGA2
Unit 7 CA400 SO4401 SO4403 1PG500
Unit 8 CA400 SO4402 GOL500
Unit 9 CA400 GOL500 GOL501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany