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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE COFACTOR-DEVOID 1-H-3-HYDROXY-4- OXOQUINALDINE 2,4-DIOXYGENASE (HOD) FROM ARTHROBACTER NITROGUAJACOLICUS RU61A
Keywords ALPHA/BETA HYDROLASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2WJ3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  A 274 2234 0
2  Protein   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  B 273 2227 0
3  Protein   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  C 273 2230 0
4  Protein   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  D 273 2230 0
5  Ligand   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  A 3 0 26
6  Ligand   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  B 3 0 26
7  Ligand   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  C 2 0 20
8  Ligand   1-H-3-HYDROXY-4-OXOQUINALDINE 2,4-DIOXYGENASE  D 2 0 20
9 Water     279 0 279
total       1382 8921 371
Proteins
Unit 1 THR2 ASP3 THR4 TYR5 LEU6 HIS7 GLU8 THR9 LEU10 VAL11 PHE12 ASP13 ASN14 LYS15 LEU16 SER17 TYR18 ILE19 ASP20 ASN21 GLN22 ARG23 ASP24 THR25 ASP26 GLY27 PRO28 ALA29 ILE30 LEU31 LEU32 LEU33 PRO34 GLY35 TRP36 CYS37 HIS38 ASP39 HIS40 ARG41 VAL42 TYR43 LYS44 TYR45 LEU46 ILE47 GLN48 GLU49 LEU50 ASP51 ALA52 ASP53 PHE54 ARG55 VAL56 ILE57 VAL58 PRO59 ASN60 TRP61 ARG62 GLY63 HIS64 GLY65 LEU66 SER67 PRO68 SER69 GLU70 VAL71 PRO72 ASP73 PHE74 GLY75 TYR76 GLN77 GLU78 GLN79 VAL80 LYS81 ASP82 ALA83 LEU84 GLU85 ILE86 LEU87 ASP88 GLN89 LEU90 GLY91 VAL92 GLU93 THR94 PHE95 LEU96 PRO97 VAL98 SER99 HIS100 SER101 HIS102 GLY103 GLY104 TRP105 VAL106 LEU107 VAL108 GLU109 LEU110 LEU111 GLU112 GLN113 ALA114 GLY115 PRO116 GLU117 ARG118 ALA119 PRO120 ARG121 GLY122 ILE123 ILE124 MET125 ASP126 TRP127 LEU128 MET129 TRP130 ALA131 PRO132 LYS133 PRO134 ASP135 PHE136 ALA137 LYS138 SER139 LEU140 THR141 LEU142 LEU143 LYS144 ASP145 PRO146 GLU147 ARG148 TRP149 ARG150 GLU151 GLY152 THR153 HIS154 GLY155 LEU156 PHE157 ASP158 VAL159 TRP160 LEU161 ASP162 GLY163 HIS164 ASP165 GLU166 LYS167 ARG168 VAL169 ARG170 HIS171 HIS172 LEU173 LEU174 GLU175 GLU176 MET177 ALA178 ASP179 TYR180 GLY181 TYR182 ASP183 CYS184 TRP185 GLY186 ARG187 SER188 GLY189 ARG190 VAL191 ILE192 GLU193 ASP194 ALA195 TYR196 GLY197 ARG198 ASN199 GLY200 SER201 PRO202 MET203 GLN204 MET205 MET206 ALA207 ASN208 LEU209 THR210 LYS211 THR212 ARG213 PRO214 ILE215 ARG216 HIS217 ILE218 PHE219 SER220 GLN221 PRO222 THR223 GLU224 PRO225 GLU226 TYR227 GLU228 LYS229 ILE230 ASN231 SER232 ASP233 PHE234 ALA235 GLU236 GLN237 HIS238 PRO239 TRP240 PHE241 SER242 TYR243 ALA244 LYS245 LEU246 GLY247 GLY248 PRO249 THR250 HIS251 PHE252 PRO253 ALA254 ILE255 ASP256 VAL257 PRO258 ASP259 ARG260 ALA261 ALA262 VAL263 HIS264 ILE265 ARG266 GLU267 PHE268 ALA269 THR270 ALA271 ILE272 ARG273 GLN274 GLY275
Unit 2 ASP3 THR4 TYR5 LEU6 HIS7 GLU8 THR9 LEU10 VAL11 PHE12 ASP13 ASN14 LYS15 LEU16 SER17 TYR18 ILE19 ASP20 ASN21 GLN22 ARG23 ASP24 THR25 ASP26 GLY27 PRO28 ALA29 ILE30 LEU31 LEU32 LEU33 PRO34 GLY35 TRP36 CYS37 HIS38 ASP39 HIS40 ARG41 VAL42 TYR43 LYS44 TYR45 LEU46 ILE47 GLN48 GLU49 LEU50 ASP51 ALA52 ASP53 PHE54 ARG55 VAL56 ILE57 VAL58 PRO59 ASN60 TRP61 ARG62 GLY63 HIS64 GLY65 LEU66 SER67 PRO68 SER69 GLU70 VAL71 PRO72 ASP73 PHE74 GLY75 TYR76 GLN77 GLU78 GLN79 VAL80 LYS81 ASP82 ALA83 LEU84 GLU85 ILE86 LEU87 ASP88 GLN89 LEU90 GLY91 VAL92 GLU93 THR94 PHE95 LEU96 PRO97 VAL98 SER99 HIS100 SER101 HIS102 GLY103 GLY104 TRP105 VAL106 LEU107 VAL108 GLU109 LEU110 LEU111 GLU112 GLN113 ALA114 GLY115 PRO116 GLU117 ARG118 ALA119 PRO120 ARG121 GLY122 ILE123 ILE124 MET125 ASP126 TRP127 LEU128 MET129 TRP130 ALA131 PRO132 LYS133 PRO134 ASP135 PHE136 ALA137 LYS138 SER139 LEU140 THR141 LEU142 LEU143 LYS144 ASP145 PRO146 GLU147 ARG148 TRP149 ARG150 GLU151 GLY152 THR153 HIS154 GLY155 LEU156 PHE157 ASP158 VAL159 TRP160 LEU161 ASP162 GLY163 HIS164 ASP165 GLU166 LYS167 ARG168 VAL169 ARG170 HIS171 HIS172 LEU173 LEU174 GLU175 GLU176 MET177 ALA178 ASP179 TYR180 GLY181 TYR182 ASP183 CYS184 TRP185 GLY186 ARG187 SER188 GLY189 ARG190 VAL191 ILE192 GLU193 ASP194 ALA195 TYR196 GLY197 ARG198 ASN199 GLY200 SER201 PRO202 MET203 GLN204 MET205 MET206 ALA207 ASN208 LEU209 THR210 LYS211 THR212 ARG213 PRO214 ILE215 ARG216 HIS217 ILE218 PHE219 SER220 GLN221 PRO222 THR223 GLU224 PRO225 GLU226 TYR227 GLU228 LYS229 ILE230 ASN231 SER232 ASP233 PHE234 ALA235 GLU236 GLN237 HIS238 PRO239 TRP240 PHE241 SER242 TYR243 ALA244 LYS245 LEU246 GLY247 GLY248 PRO249 THR250 HIS251 PHE252 PRO253 ALA254 ILE255 ASP256 VAL257 PRO258 ASP259 ARG260 ALA261 ALA262 VAL263 HIS264 ILE265 ARG266 GLU267 PHE268 ALA269 THR270 ALA271 ILE272 ARG273 GLN274 GLY275
Unit 3 THR2 ASP3 THR4 TYR5 LEU6 HIS7 GLU8 THR9 LEU10 VAL11 PHE12 ASP13 ASN14 LYS15 LEU16 SER17 TYR18 ILE19 ASP20 ASN21 GLN22 ARG23 ASP24 THR25 ASP26 GLY27 PRO28 ALA29 ILE30 LEU31 LEU32 LEU33 PRO34 GLY35 TRP36 CYS37 HIS38 ASP39 HIS40 ARG41 VAL42 TYR43 LYS44 TYR45 LEU46 ILE47 GLN48 GLU49 LEU50 ASP51 ALA52 ASP53 PHE54 ARG55 VAL56 ILE57 VAL58 PRO59 ASN60 TRP61 ARG62 GLY63 HIS64 GLY65 LEU66 SER67 PRO68 SER69 GLU70 VAL71 PRO72 ASP73 PHE74 GLY75 TYR76 GLN77 GLU78 GLN79 VAL80 LYS81 ASP82 ALA83 LEU84 GLU85 ILE86 LEU87 ASP88 GLN89 LEU90 GLY91 VAL92 GLU93 THR94 PHE95 LEU96 PRO97 VAL98 SER99 HIS100 SER101 HIS102 GLY103 GLY104 TRP105 VAL106 LEU107 VAL108 GLU109 LEU110 LEU111 GLU112 GLN113 ALA114 GLY115 PRO116 GLU117 ARG118 ALA119 PRO120 ARG121 GLY122 ILE123 ILE124 MET125 ASP126 TRP127 LEU128 MET129 TRP130 ALA131 PRO132 LYS133 PRO134 ASP135 PHE136 ALA137 LYS138 SER139 LEU140 THR141 LEU142 LEU143 LYS144 ASP145 PRO146 GLU147 ARG148 TRP149 ARG150 GLU151 GLY152 THR153 HIS154 GLY155 LEU156 PHE157 ASP158 VAL159 TRP160 LEU161 ASP162 GLY163 HIS164 ASP165 GLU166 LYS167 ARG168 VAL169 ARG170 HIS171 HIS172 LEU173 LEU174 GLU175 GLU176 MET177 ALA178 ASP179 TYR180 GLY181 TYR182 ASP183 CYS184 TRP185 GLY186 ARG187 SER188 GLY189 ARG190 VAL191 ILE192 GLU193 ASP194 ALA195 TYR196 GLY197 ARG198 ASN199 GLY200 SER201 PRO202 MET203 GLN204 MET205 MET206 ALA207 ASN208 LEU209 THR210 LYS211 THR212 ARG213 PRO214 ILE215 ARG216 HIS217 ILE218 PHE219 SER220 GLN221 PRO222 THR223 GLU224 PRO225 GLU226 TYR227 GLU228 LYS229 ILE230 ASN231 SER232 ASP233 PHE234 ALA235 GLU236 GLN237 HIS238 PRO239 TRP240 PHE241 SER242 TYR243 ALA244 LYS245 LEU246 GLY247 GLY248 PRO249 THR250 HIS251 PHE252 PRO253 ALA254 ILE255 ASP256 VAL257 PRO258 ASP259 ARG260 ALA261 ALA262 VAL263 HIS264 ILE265 ARG266 GLU267 PHE268 ALA269 THR270 ALA271 ILE272 ARG273 GLN274
Unit 4 THR2 ASP3 THR4 TYR5 LEU6 HIS7 GLU8 THR9 LEU10 VAL11 PHE12 ASP13 ASN14 LYS15 LEU16 SER17 TYR18 ILE19 ASP20 ASN21 GLN22 ARG23 ASP24 THR25 ASP26 GLY27 PRO28 ALA29 ILE30 LEU31 LEU32 LEU33 PRO34 GLY35 TRP36 CYS37 HIS38 ASP39 HIS40 ARG41 VAL42 TYR43 LYS44 TYR45 LEU46 ILE47 GLN48 GLU49 LEU50 ASP51 ALA52 ASP53 PHE54 ARG55 VAL56 ILE57 VAL58 PRO59 ASN60 TRP61 ARG62 GLY63 HIS64 GLY65 LEU66 SER67 PRO68 SER69 GLU70 VAL71 PRO72 ASP73 PHE74 GLY75 TYR76 GLN77 GLU78 GLN79 VAL80 LYS81 ASP82 ALA83 LEU84 GLU85 ILE86 LEU87 ASP88 GLN89 LEU90 GLY91 VAL92 GLU93 THR94 PHE95 LEU96 PRO97 VAL98 SER99 HIS100 SER101 HIS102 GLY103 GLY104 TRP105 VAL106 LEU107 VAL108 GLU109 LEU110 LEU111 GLU112 GLN113 ALA114 GLY115 PRO116 GLU117 ARG118 ALA119 PRO120 ARG121 GLY122 ILE123 ILE124 MET125 ASP126 TRP127 LEU128 MET129 TRP130 ALA131 PRO132 LYS133 PRO134 ASP135 PHE136 ALA137 LYS138 SER139 LEU140 THR141 LEU142 LEU143 LYS144 ASP145 PRO146 GLU147 ARG148 TRP149 ARG150 GLU151 GLY152 THR153 HIS154 GLY155 LEU156 PHE157 ASP158 VAL159 TRP160 LEU161 ASP162 GLY163 HIS164 ASP165 GLU166 LYS167 ARG168 VAL169 ARG170 HIS171 HIS172 LEU173 LEU174 GLU175 GLU176 MET177 ALA178 ASP179 TYR180 GLY181 TYR182 ASP183 CYS184 TRP185 GLY186 ARG187 SER188 GLY189 ARG190 VAL191 ILE192 GLU193 ASP194 ALA195 TYR196 GLY197 ARG198 ASN199 GLY200 SER201 PRO202 MET203 GLN204 MET205 MET206 ALA207 ASN208 LEU209 THR210 LYS211 THR212 ARG213 PRO214 ILE215 ARG216 HIS217 ILE218 PHE219 SER220 GLN221 PRO222 THR223 GLU224 PRO225 GLU226 TYR227 GLU228 LYS229 ILE230 ASN231 SER232 ASP233 PHE234 ALA235 GLU236 GLN237 HIS238 PRO239 TRP240 PHE241 SER242 TYR243 ALA244 LYS245 LEU246 GLY247 GLY248 PRO249 THR250 HIS251 PHE252 PRO253 ALA254 ILE255 ASP256 VAL257 PRO258 ASP259 ARG260 ALA261 ALA262 VAL263 HIS264 ILE265 ARG266 GLU267 PHE268 ALA269 THR270 ALA271 ILE272 ARG273 GLN274
Ligands
Unit 5 GOL1276 SRT1277 SRT1278
Unit 6 GOL1276 SRT1277 SRT1278
Unit 7 SRT1275 SRT1276
Unit 8 SRT1275 SRT1276
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany