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Title | ENHANCING THE RECEPTOR AFFINITY OF THE SIALIC ACID-BINDING D VIBRIO CHOLERAE SIALIDASE THROUGH MULTIVALENCY | |
Keywords | CBM, CALCIUM, SECRETED, HYDROLASE, GLYCOSIDASE, SIALIC ACID, CARBOHYDRATE-BINDING-DOMAIN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2W68 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | SIALIDASE | A | 195 | 1483 | 0 |
2 | Protein | SIALIDASE | B | 193 | 1474 | 0 |
3 | Protein | SIALIDASE | C | 194 | 1476 | 0 |
4 | Ligand | D | 3 | 0 | 43 | |
5 | Ligand | E | 3 | 0 | 43 | |
6 | Ligand | F | 3 | 0 | 43 | |
7 | Ligand | SIALIDASE | A | 1 | 0 | 1 |
8 | Water | 133 | 0 | 133 | ||
total | 725 | 4433 | 263 |
Unit 1 | ALA22 ALA23 MET24 ALA25 LEU26 PHE27 ASP28 TYR29 ASN30 ALA31 THR32 GLY33 ASP34 THR35 GLU36 PHE37 ASP38 SER39 PRO40 ALA41 LYS42 GLN43 GLY44 TRP45 MET46 GLN47 ASP48 ASN49 THR50 ASN51 ASN52 GLY53 SER54 GLY55 VAL56 LEU57 THR58 ASN59 ALA60 ASP61 GLY62 MET63 PRO64 ALA65 TRP66 LEU67 VAL68 GLN69 GLY70 ILE71 GLY72 GLY73 ARG74 ALA75 GLN76 TRP77 THR78 TYR79 SER80 LEU81 SER82 THR83 ASN84 GLN85 HIS86 ALA87 GLN88 ALA89 SER90 SER91 PHE92 GLY93 TRP94 ARG95 MET96 THR97 THR98 GLU99 MET100 LYS101 VAL102 LEU103 SER104 GLY105 GLY106 MET107 ILE108 THR109 ASN110 TYR111 TYR112 ALA113 ASN114 GLY115 THR116 GLN117 ARG118 VAL119 LEU120 PRO121 ILE122 ILE123 SER124 LEU125 ASP126 SER127 SER128 GLY129 ASN130 LEU131 VAL132 VAL133 GLU134 PHE135 GLU136 GLY137 GLN138 THR139 GLY140 ARG141 THR142 VAL143 LEU144 ALA145 THR146 GLY147 THR148 ALA149 ALA150 THR151 GLU152 TYR153 HIS154 LYS155 PHE156 GLU157 LEU158 VAL159 PHE160 LEU161 PRO162 GLY163 SER164 ASN165 PRO166 SER167 ALA168 SER169 PHE170 TYR171 PHE172 ASP173 GLY174 LYS175 LEU176 ILE177 ARG178 ASP179 ASN180 ILE181 GLN182 PRO183 THR184 ALA185 SER186 LYS187 GLN188 ASN189 MET190 ILE191 VAL192 TRP193 GLY194 ASN195 GLY196 SER197 SER198 ASN199 THR200 ASP201 GLY202 VAL203 ALA204 ALA205 TYR206 ARG207 ASP208 ILE209 LYS210 PHE211 GLU212 ILE213 GLN214 GLY215 ASP216 |
Unit 2 | MET24 ALA25 LEU26 PHE27 ASP28 TYR29 ASN30 ALA31 THR32 GLY33 ASP34 THR35 GLU36 PHE37 ASP38 SER39 PRO40 ALA41 LYS42 GLN43 GLY44 TRP45 MET46 GLN47 ASP48 ASN49 THR50 ASN51 ASN52 GLY53 SER54 GLY55 VAL56 LEU57 THR58 ASN59 ALA60 ASP61 GLY62 MET63 PRO64 ALA65 TRP66 LEU67 VAL68 GLN69 GLY70 ILE71 GLY72 GLY73 ARG74 ALA75 GLN76 TRP77 THR78 TYR79 SER80 LEU81 SER82 THR83 ASN84 GLN85 HIS86 ALA87 GLN88 ALA89 SER90 SER91 PHE92 GLY93 TRP94 ARG95 MET96 THR97 THR98 GLU99 MET100 LYS101 VAL102 LEU103 SER104 GLY105 GLY106 MET107 ILE108 THR109 ASN110 TYR111 TYR112 ALA113 ASN114 GLY115 THR116 GLN117 ARG118 VAL119 LEU120 PRO121 ILE122 ILE123 SER124 LEU125 ASP126 SER127 SER128 GLY129 ASN130 LEU131 VAL132 VAL133 GLU134 PHE135 GLU136 GLY137 GLN138 THR139 GLY140 ARG141 THR142 VAL143 LEU144 ALA145 THR146 GLY147 THR148 ALA149 ALA150 THR151 GLU152 TYR153 HIS154 LYS155 PHE156 GLU157 LEU158 VAL159 PHE160 LEU161 PRO162 GLY163 SER164 ASN165 PRO166 SER167 ALA168 SER169 PHE170 TYR171 PHE172 ASP173 GLY174 LYS175 LEU176 ILE177 ARG178 ASP179 ASN180 ILE181 GLN182 PRO183 THR184 ALA185 SER186 LYS187 GLN188 ASN189 MET190 ILE191 VAL192 TRP193 GLY194 ASN195 GLY196 SER197 SER198 ASN199 THR200 ASP201 GLY202 VAL203 ALA204 ALA205 TYR206 ARG207 ASP208 ILE209 LYS210 PHE211 GLU212 ILE213 GLN214 GLY215 ASP216 |
Unit 3 | ALA22 ALA23 MET24 ALA25 LEU26 PHE27 ASP28 TYR29 ASN30 ALA31 THR32 GLY33 ASP34 THR35 GLU36 PHE37 ASP38 SER39 PRO40 ALA41 LYS42 GLN43 GLY44 TRP45 MET46 GLN47 ASP48 ASN49 THR50 ASN51 ASN52 GLY53 SER54 GLY55 VAL56 LEU57 THR58 ASN59 ALA60 ASP61 GLY62 MET63 PRO64 ALA65 TRP66 LEU67 VAL68 GLN69 GLY70 ILE71 GLY72 GLY73 ARG74 ALA75 GLN76 TRP77 THR78 TYR79 SER80 LEU81 SER82 THR83 ASN84 GLN85 HIS86 ALA87 GLN88 ALA89 SER90 SER91 PHE92 GLY93 TRP94 ARG95 MET96 THR97 THR98 GLU99 MET100 LYS101 VAL102 LEU103 SER104 GLY105 GLY106 MET107 ILE108 THR109 ASN110 TYR111 TYR112 ALA113 ASN114 GLY115 THR116 GLN117 ARG118 VAL119 LEU120 PRO121 ILE122 ILE123 SER124 LEU125 ASP126 SER127 SER128 GLY129 ASN130 LEU131 VAL132 VAL133 GLU134 PHE135 GLU136 GLY137 GLN138 THR139 GLY140 ARG141 THR142 VAL143 LEU144 ALA145 THR146 GLY147 THR148 ALA149 ALA150 THR151 GLU152 TYR153 HIS154 LYS155 PHE156 GLU157 LEU158 VAL159 PHE160 LEU161 PRO162 GLY163 SER164 ASN165 PRO166 SER167 ALA168 SER169 PHE170 TYR171 PHE172 ASP173 GLY174 LYS175 LEU176 ILE177 ARG178 ASP179 ASN180 ILE181 GLN182 PRO183 THR184 ALA185 SER186 LYS187 GLN188 ASN189 MET190 ILE191 VAL192 TRP193 GLY194 ASN195 GLY196 SER197 SER198 ASN199 THR200 ASP201 GLY202 VAL203 ALA204 ALA205 TYR206 ARG207 ASP208 ILE209 LYS210 PHE211 GLU212 ILE213 GLN214 GLY215 |
Unit 4 | BGC1 GAL2 SIA3 |
Unit 5 | BGC1 GAL2 SIA3 |
Unit 6 | BGC1 GAL2 SIA3 |
Unit 7 | CA1211 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |