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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM GLYCEROL KINASE WITH ADP
Keywords CLOSED CONFORMATION, KINASE, MALARIA, PLASMODIUM, TRANSFERASE, SUGAR KINASE/HSP70/ACTIN SUPERFAMILY, GLYCEROL KINASE, OPEN CONFORMATION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2W41     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLYCEROL KINASE, PUTATIVE  A 506 4012 0
2  Protein   GLYCEROL KINASE, PUTATIVE  B 507 4020 0
3  Ligand   GLYCEROL KINASE, PUTATIVE  A 11 0 67
4  Ligand   GLYCEROL KINASE, PUTATIVE  B 12 0 71
5 Water     307 0 307
total       1343 8032 445
Proteins
Unit 1 SER-4 GLU-3 PHE-2 GLY-1 SER0 MET1 ASN2 VAL3 ILE4 LEU5 SER6 ILE7 ASP8 GLN9 SER10 THR11 GLN12 SER13 THR14 LYS15 VAL16 PHE17 PHE18 TYR19 ASP20 GLU21 GLU22 LEU23 ASN24 ILE25 VAL26 HIS27 SER28 ASN29 ASN30 LEU31 ASN32 HIS33 GLU34 GLN35 LYS36 CYS37 LEU38 LYS39 PRO40 GLY41 TRP42 TYR43 GLU44 HIS45 ASP46 PRO47 ILE48 GLU49 ILE50 MET51 THR52 ASN53 LEU54 TYR55 ASN56 LEU57 MET58 ASN59 GLU60 GLY61 ILE62 LYS63 VAL64 LEU65 LYS66 ASP67 LYS68 TYR69 THR70 SER71 VAL72 ILE73 ILE74 LYS75 CYS76 ILE77 GLY78 ILE79 THR80 ASN81 GLN82 ARG83 GLU84 THR85 VAL86 ILE87 ILE88 TRP89 ASP90 ARG91 ILE92 THR93 GLY94 LYS95 PRO96 LEU97 TYR98 ASN99 ALA100 ILE101 VAL102 TRP103 LEU104 ASP105 THR106 ARG107 VAL108 GLU109 GLU110 LEU111 VAL112 THR113 GLU114 PHE115 SER116 ALA117 LYS118 TYR119 ASN120 ASN121 ASN122 ASP123 ILE124 GLN125 LYS126 LYS127 THR128 GLY129 THR130 TYR131 PHE132 ASN133 THR134 TYR135 PHE136 SER137 ALA138 PHE139 LYS140 ILE141 LEU142 TRP143 LEU144 ILE145 GLN146 ASN147 ASN148 PRO149 GLU150 ILE151 LYS152 GLN153 LYS154 ILE155 ASP156 ASP157 GLY158 THR159 ALA160 VAL161 ILE162 GLY163 ASN164 ILE165 ASN166 THR167 TRP168 LEU169 ILE170 PHE171 ASN172 LEU173 THR174 LYS175 GLY176 ASN177 CYS178 TYR179 THR180 ASP181 VAL182 THR183 ASN184 ALA185 SER186 ARG187 THR188 LEU189 LEU190 MET191 ASP192 ILE193 ASN194 THR195 LEU196 GLN197 TRP198 ASP199 GLU200 LYS201 MET202 CYS203 LYS204 ILE205 PHE206 ASN207 ILE208 THR209 ASN210 MET211 SER212 VAL213 LEU214 PRO215 GLU216 ILE217 LYS218 SER219 ASN220 CYS221 SER222 ASN223 PHE224 GLY225 LEU226 VAL227 LYS228 SER229 GLU230 HIS231 VAL232 PRO233 ASP234 TYR235 LEU236 ASN237 ILE238 PRO239 ILE240 THR241 GLY242 CYS243 ILE244 GLY245 ASP246 GLN247 GLN248 SER249 ALA250 CYS251 ILE252 GLY253 GLN254 ALA255 ILE256 PHE257 ASP258 GLU259 GLY260 GLU261 ALA262 LYS263 CYS264 THR265 TYR266 GLY267 THR268 GLY269 VAL270 PHE271 LEU272 LEU273 ILE274 ASN275 THR276 GLY277 GLU278 LYS279 VAL280 VAL281 TYR282 SER283 THR284 CYS285 GLY286 LEU287 ILE288 THR289 THR290 ILE291 CYS292 TYR293 LYS294 PHE295 ASN296 ASP297 ASN298 ASP299 LYS300 PRO301 LYS302 TYR303 ALA304 LEU305 GLU306 GLY307 SER308 ILE309 GLY310 THR311 ALA312 GLY313 SER314 GLY315 VAL316 SER317 TRP318 LEU319 LEU320 LYS321 ASN322 LYS323 LEU324 ILE325 ASP326 ASP327 PRO328 SER329 GLU330 ALA331 SER332 ASP333 ILE334 MET335 GLU336 LYS337 CYS338 GLU339 ASN340 THR341 THR342 GLY343 VAL344 ILE345 PHE346 VAL347 PRO348 ALA349 PHE350 SER351 GLY352 LEU353 TYR354 ALA355 PRO356 ARG357 TRP358 ARG359 SER360 ASP361 ALA362 ARG363 ALA364 SER365 ILE366 TYR367 GLY368 MET369 THR370 PHE371 ASN372 THR373 GLU374 ARG375 SER376 HIS377 ILE378 VAL379 ARG380 ALA381 LEU382 LEU383 GLU384 GLY385 ILE386 ALA387 PHE388 GLN389 LEU390 ASN391 GLU392 ILE393 VAL394 ASP395 SER396 LEU397 THR398 SER399 ASP400 MET401 GLY402 ILE403 GLU404 MET405 LEU406 HIS407 VAL408 LEU409 ARG410 CYS411 ASP412 GLY413 GLY414 MET415 THR416 LYS417 ASN418 LYS419 PRO420 PHE421 MET422 GLN423 PHE424 ASN425 SER426 ASP427 ILE428 ILE429 ASN430 THR431 LYS432 ILE433 GLU434 VAL435 SER436 LYS437 TYR438 LYS439 GLU440 VAL441 THR442 SER443 LEU444 GLY445 ALA446 ALA447 VAL448 LEU449 ALA450 GLY451 LEU452 GLU453 VAL454 LYS455 ILE456 TRP457 ASP458 SER459 LEU460 ASP461 SER462 VAL463 LYS464 SER465 LEU466 LEU467 ARG468 ARG469 SER470 ASP471 ALA472 VAL473 PHE474 HIS475 SER476 LYS477 MET478 ASP479 ASP480 LYS481 LYS482 ARG483 LYS484 LYS485 LYS486 THR487 SER488 GLU489 TRP490 ASN491 LYS492 ALA493 VAL494 GLU495 ARG496 THR497 LEU498 ILE499 GLN500 LEU501
Unit 2 ILE-5 SER-4 GLU-3 PHE-2 GLY-1 SER0 MET1 ASN2 VAL3 ILE4 LEU5 SER6 ILE7 ASP8 GLN9 SER10 THR11 GLN12 SER13 THR14 LYS15 VAL16 PHE17 PHE18 TYR19 ASP20 GLU21 GLU22 LEU23 ASN24 ILE25 VAL26 HIS27 SER28 ASN29 ASN30 LEU31 ASN32 HIS33 GLU34 GLN35 LYS36 CYS37 LEU38 LYS39 PRO40 GLY41 TRP42 TYR43 GLU44 HIS45 ASP46 PRO47 ILE48 GLU49 ILE50 MET51 THR52 ASN53 LEU54 TYR55 ASN56 LEU57 MET58 ASN59 GLU60 GLY61 ILE62 LYS63 VAL64 LEU65 LYS66 ASP67 LYS68 TYR69 THR70 SER71 VAL72 ILE73 ILE74 LYS75 CYS76 ILE77 GLY78 ILE79 THR80 ASN81 GLN82 ARG83 GLU84 THR85 VAL86 ILE87 ILE88 TRP89 ASP90 ARG91 ILE92 THR93 GLY94 LYS95 PRO96 LEU97 TYR98 ASN99 ALA100 ILE101 VAL102 TRP103 LEU104 ASP105 THR106 ARG107 VAL108 GLU109 GLU110 LEU111 VAL112 THR113 GLU114 PHE115 SER116 ALA117 LYS118 TYR119 ASN120 ASN121 ASN122 ASP123 ILE124 GLN125 LYS126 LYS127 THR128 GLY129 THR130 TYR131 PHE132 ASN133 THR134 TYR135 PHE136 SER137 ALA138 PHE139 LYS140 ILE141 LEU142 TRP143 LEU144 ILE145 GLN146 ASN147 ASN148 PRO149 GLU150 ILE151 LYS152 GLN153 LYS154 ILE155 ASP156 ASP157 GLY158 THR159 ALA160 VAL161 ILE162 GLY163 ASN164 ILE165 ASN166 THR167 TRP168 LEU169 ILE170 PHE171 ASN172 LEU173 THR174 LYS175 GLY176 ASN177 CYS178 TYR179 THR180 ASP181 VAL182 THR183 ASN184 ALA185 SER186 ARG187 THR188 LEU189 LEU190 MET191 ASP192 ILE193 ASN194 THR195 LEU196 GLN197 TRP198 ASP199 GLU200 LYS201 MET202 CYS203 LYS204 ILE205 PHE206 ASN207 ILE208 THR209 ASN210 MET211 SER212 VAL213 LEU214 PRO215 GLU216 ILE217 LYS218 SER219 ASN220 CYS221 SER222 ASN223 PHE224 GLY225 LEU226 VAL227 LYS228 SER229 GLU230 HIS231 VAL232 PRO233 ASP234 TYR235 LEU236 ASN237 ILE238 PRO239 ILE240 THR241 GLY242 CYS243 ILE244 GLY245 ASP246 GLN247 GLN248 SER249 ALA250 CYS251 ILE252 GLY253 GLN254 ALA255 ILE256 PHE257 ASP258 GLU259 GLY260 GLU261 ALA262 LYS263 CYS264 THR265 TYR266 GLY267 THR268 GLY269 VAL270 PHE271 LEU272 LEU273 ILE274 ASN275 THR276 GLY277 GLU278 LYS279 VAL280 VAL281 TYR282 SER283 THR284 CYS285 GLY286 LEU287 ILE288 THR289 THR290 ILE291 CYS292 TYR293 LYS294 PHE295 ASN296 ASP297 ASN298 ASP299 LYS300 PRO301 LYS302 TYR303 ALA304 LEU305 GLU306 GLY307 SER308 ILE309 GLY310 THR311 ALA312 GLY313 SER314 GLY315 VAL316 SER317 TRP318 LEU319 LEU320 LYS321 ASN322 LYS323 LEU324 ILE325 ASP326 ASP327 PRO328 SER329 GLU330 ALA331 SER332 ASP333 ILE334 MET335 GLU336 LYS337 CYS338 GLU339 ASN340 THR341 THR342 GLY343 VAL344 ILE345 PHE346 VAL347 PRO348 ALA349 PHE350 SER351 GLY352 LEU353 TYR354 ALA355 PRO356 ARG357 TRP358 ARG359 SER360 ASP361 ALA362 ARG363 ALA364 SER365 ILE366 TYR367 GLY368 MET369 THR370 PHE371 ASN372 THR373 GLU374 ARG375 SER376 HIS377 ILE378 VAL379 ARG380 ALA381 LEU382 LEU383 GLU384 GLY385 ILE386 ALA387 PHE388 GLN389 LEU390 ASN391 GLU392 ILE393 VAL394 ASP395 SER396 LEU397 THR398 SER399 ASP400 MET401 GLY402 ILE403 GLU404 MET405 LEU406 HIS407 VAL408 LEU409 ARG410 CYS411 ASP412 GLY413 GLY414 MET415 THR416 LYS417 ASN418 LYS419 PRO420 PHE421 MET422 GLN423 PHE424 ASN425 SER426 ASP427 ILE428 ILE429 ASN430 THR431 LYS432 ILE433 GLU434 VAL435 SER436 LYS437 TYR438 LYS439 GLU440 VAL441 THR442 SER443 LEU444 GLY445 ALA446 ALA447 VAL448 LEU449 ALA450 GLY451 LEU452 GLU453 VAL454 LYS455 ILE456 TRP457 ASP458 SER459 LEU460 ASP461 SER462 VAL463 LYS464 SER465 LEU466 LEU467 ARG468 ARG469 SER470 ASP471 ALA472 VAL473 PHE474 HIS475 SER476 LYS477 MET478 ASP479 ASP480 LYS481 LYS482 ARG483 LYS484 LYS485 LYS486 THR487 SER488 GLU489 TRP490 ASN491 LYS492 ALA493 VAL494 GLU495 ARG496 THR497 LEU498 ILE499 GLN500 LEU501
Ligands
Unit 3 ADP1502 EDO1503 EDO1504 EDO1505 EDO1506 EDO1507 EDO1508 EDO1509 EDO1510 EDO1511 EDO1512
Unit 4 ADP1502 EDO1503 EDO1504 EDO1505 EDO1506 EDO1507 EDO1508 EDO1509 EDO1510 EDO1511 EDO1512 EDO1513
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany